Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq87054 302 1e-78 seq137177 107 6e-20 >seq87054 Length=8607 Score = 302 bits (334), Expect = 1e-78 Identities = 475/671 (71%), Gaps = 28/671 (4%) Strand=Plus/Minus Query 3029 TGAAATGGCAGAGGGAGGAGGCGGAGCTATGGGCGACTCTTCAGGGGGTGCCGATGGAGT 3088 ||||||||| || || |||| | |||||| || | | |||||||||||| | Sbjct 7235 TGAAATGGCTTCAGGCGGTGGCGCGCCAATGGGCAACAATCAACAAGGTGCCGATGGAAT 7176 Query 3089 GGGTAATGCCTCGGGAAATTGGCATTGCGATTCCCAATGGATGGGAAACACAGTCATCAC 3148 |||||| ||||||||||||||||||||||||||| ||||||| || ||| |||| Sbjct 7175 CGGTAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCAC 7116 Query 3149 AAAGACCACCAGAACCTGGGTCCTGCCAAGCTACAACAACCACATCTACAAAGCAATTAC 3208 ||||||||||||||||| || || |||||||||||||| |||| || || || | Sbjct 7115 CCGAACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATCAA 7056 Query 3209 CAGCGGAACCTCTCAAGATGCAAATGTCCAGTATGCAGGATACAGTACCCCCTGGGGGTA 3268 | ||| | | || | ||| || || || ||||||| ||||||||||| || Sbjct 7055 CGCCGGCAACG---AAAA--CAAGTG----GTTTG---GATACAGCACCCCCTGGGGATA 7008 Query 3269 CTTTGATTTCAACCGCTTCCACTGCCACTTCTCCCCTAGAGACTGGCAGAGACTTATCAA 3328 |||||| |||||||| ||||||||||||||| | || ||||||||||| ||| ||||| Sbjct 7007 CTTTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACTCATCAA 6948 Query 3329 CAACCATTGGGGAATCAGACCCAAGTCTCTTAAATTCAAGATCTTCAATGTCCAAGTCAA 3388 |||| || ||| |||||||||||| | | |||||| ||| ||| |||||| ||| Sbjct 6947 CAACTAT---GGATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAACATCCAAGCCAA 6891 Query 3389 AGAAGTCACAACGCAGGATCA--GACAAAGACCATTGCAAACAATCTCACCTCAACAATT 3446 || ||||| |||||||| || | || | ||||| || || || |||||| | | Sbjct 6890 GGAGGTCACGACGCAGGA-CAGTGTCACA-ACCATCGCCAATAACCTCACCAGCTCGGTG 6833 Query 3447 CAAGTCTTTACGGATGATGAGCATCAACTCCCGTATGTCCTGGGCTCGGCTACGGAAGGC 3506 | |||||| ||| || || | || || || || || ||| || | ||| Sbjct 6832 CCGGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGCGCACAAGGGC 6773 Query 3507 ACCATGCCGCCGTTCCCGTCGGATGTCTATGCCCTGCCGCAGTACGGGTACTGCACAATG 3566 || |||| || |||||| | || | | | || ||||||||||| ||| |||| | Sbjct 6772 ACGCTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCTACCTCACACT- 6714 Query 3567 CACACCAACCAGAATGGAGCACGGTTCAATGACCGTAGTGCATTCTACTGCTTAGAGTAC 3626 |||| || | | || | || || | || ||||||||||| |||||| Sbjct 6713 -----CAAC--GACAGCAACA-GCGCCATCCGGCGGGGGGCCTTCTACTGCTTTGAGTAC 6662 Query 3627 TTCCCTAGTCAGATGCTAAGAACAGGCAACAACTTTGAGTTCACATTTGACTTTGAAGAA 3686 ||||| || |||||||| || || |||||||||||||||||| | || ||||| || Sbjct 6661 TTCCCGAGCCAGATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACGAGTTTGAGGAC 6602 Query 3687 GTTCCTTTCCA 3697 || || ||||| Sbjct 6601 GTGCCCTTCCA 6591 Score = 114 bits (126), Expect = 4e-22 Identities = 202/290 (70%), Gaps = 6/290 (2%) Strand=Plus/Minus Query 2596 TTGTACTTCCTGGCTATAAGTATCTTGGGCCTGGTAACGGCCTGGATAAAGGCCCACCTG 2655 |||| |||| || |||||||| || || || |||||||| |||||||||| || | Sbjct 7719 TTGTCCTTCTGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAGCCCG 7660 Query 2656 TCAATAAGGCGGACAGCGTCGCGCTTGAACACGACAAGGCCTATGACCAGCAGCTTAA-A 2714 | || | || || |||| | || ||||| |||| || | | || |||| | | Sbjct 7659 TGAACAGAGCCAACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTTGAGA 7600 Query 2715 GCGGGAGACAACCCATATATAAAATTCAATCACGCTGACCAGGACTTTATAGATAGCCTC 2774 |||| |||||| |||||| | || | ||||||||| ||| ||| || ||| | ||| Sbjct 7599 GCGG-AGACAATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAAGCTC 7541 Query 2775 CAAGACGAC--CAGTCATTCGGAGGTAATCTTGGAAAGGCTGTATTTCAGGCCAAAAAAC 2832 ||||| ||| ||| |||||||| | || ||||| || || ||||||||||| ||| Sbjct 7540 CAAGAAGACTCCAGC--TTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAAAA 7483 Query 2833 GTATCTTAGAGCCATTTGGCCTAGTAGAAGATCCTGTCAACACGGCACCT 2882 | | | || || |||| | || || | ||||| || ||||| ||| Sbjct 7482 GGGTTCTCGAACCTTTTGATTTGGTCGAGAAGCCTGTTAAGACGGCTCCT 7433 >seq137177 Length=6214 Score = 107 bits (118), Expect = 6e-20 Identities = 141/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 3140 AGTCATCACAAAGACCACCAGAACCTGGGTCCTGCCAAGCTACAACAACCACATCTACAA 3199 |||| |||| | |||| | ||||| |||| ||||| ||||||||| ||||| | ||||| Sbjct 188 AGTCCTCACCAGAACCAACGGAACCCGGGTGCTGCCCAGCTACAACCACCACCTGTACAA 129 Query 3200 AGCAATTACCAGCGGAACCTC--TCAAGATGCAAATGTCCAGTA-TGCAGGATACAGTAC 3256 || || || ||| | ||| |||| ||| | | ||| | ||| |||||| || Sbjct 128 GGCCATCGACACCGGCAACTCCATCAATGAGCACAA--CAAGTGGTTCAG-ATACAGCAC 72 Query 3257 CCCCTGGGGGTACTTTGATTTCAACCGCTTCCACTGCCACTTCTCCCCTAGAGACTGGCA 3316 ||||| || ||| ||| |||||||| | ||||||||||| || || |||| |||||| Sbjct 71 ACCCTGAGGACACTGTGACTTCAACCGATGTCACTGCCACTTTTCACCAAGAGGCTGGCA 12 Query 3317 GAGACTTATCA 3327 | |||| |||| Sbjct 11 GCGACTCATCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16192968113080