Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq87054 390 3e-105 >seq87054 Length=8607 Score = 390 bits (432), Expect = 3e-105 Identities = 531/738 (72%), Gaps = 31/738 (4%) Strand=Plus/Minus Query 2814 AATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATAACGAGGGTGCCGATGGAGTGGG 2873 ||||||||||||||||||||| ||||||| ||||| | | |||||||||||| | || Sbjct 7232 AATGGCTTCAGGCGGTGGCGCGCCAATGGGCAACAATCAACAAGGTGCCGATGGAATCGG 7173 Query 2874 TAATTCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTCATCACCAC 2933 ||||||||| |||||||||||||||||||||| ||| ||| |||| |||| ||||| Sbjct 7172 TAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCACCCG 7113 Query 2934 CAGCACCAGAACCTGGGCCCTGCCCACTTACAACAACCATCTCTACAAGCAAATCTCCAG 2993 | |||||||||||||| || |||| ||||||||||||||||| ||| ||| | | Sbjct 7112 AACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATCAAC-G 7054 Query 2994 CCAATCAGGAGCTTCAAACGACAACCACTACTTTGGCTACAGCACCCCTTGGGGGTATTT 3053 || || ||||| ||| | | ||||| ||||||||||| ||||| || || Sbjct 7053 CCG-------GC----AACGAAAACAAGTGGTTTGGATACAGCACCCCCTGGGGATACTT 7005 Query 3054 TGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATTAACAA 3113 |||||| ||| ||||||||||||||||| | || || |||||||||| |||||| ||| Sbjct 7004 TGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACTCAT---CAA 6948 Query 3114 CAACTGGGGATTCCGGCCCAAGAAACTCAGCTTCAAGCTCTTCAACATCCAAGTTAGAGG 3173 ||||| |||||| | |||||| | ||||||||||| ||||||||||| | | Sbjct 6947 CAACTATGGATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAACATCCAAGCCAAGGA 6888 Query 3174 GGTC---ACGCAGAACGATGGCACGACGACTATTGCCAATAACCTTACCAGCACGGTTCA 3230 |||| |||||| || || | || || || ||||||||||| |||||| |||| | Sbjct 6887 GGTCACGACGCAGGACAGTGTC---ACAACCATCGCCAATAACCTCACCAGCTCGGTGCC 6831 Query 3231 AGTGTTTACGGACTCGGAGTATCAGCTCCCGTACGTGCTCGGGTCGGCGCACCAAGGCTG 3290 || ||| |||| |||| ||| | || || |||||||| || |||||| | ||| Sbjct 6830 GGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGCGCACAAGGGCAC 6771 Query 3291 TCTCCCGCCGTTTCCAGCGGACGTCTTCATGGTCCCTCAGTATGGATACCTCACCCTGAA 3350 || || || || || || ||| | || | | || ||||| || |||||||| || || Sbjct 6770 GCTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCTACCTCACACTCAA 6711 Query 3351 CAACGGAA-----GTCAAGCGGTGGGACGCTCATCCTTTTACTGCCTGGAGTACTTCCCT 3405 | || | | | || ||| ||| | |||| |||||| | ||||||||||| Sbjct 6710 CGACAGCAACAGCGCCATCCGGCGGGGGG-----CCTTCTACTGCTTTGAGTACTTCCCG 6656 Query 3406 TCGCAGATGCTAAGGACTGGAAATAACTTCCAATTCAGCTATACCTTCGAGGATGTACCT 3465 |||||||| ||||| || || ||||| | ||| ||| || ||||| || || Sbjct 6655 AGCCAGATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACGAGTTTGAGGACGTGCCC 6596 Query 3466 TTTCACAGCAGCTACGCTCACAGCCAGAGTTTGGATCGCTTGATGAATCCTCTTATTGAT 3525 || ||| |||||| ||| || | |||| | ||||||||||| || || Sbjct 6595 TTCCACTCGAGCTACATGCACTCTCAATTGCTCTATCGACTCATGAATCCTCTCATGGAC 6536 Query 3526 CAGTATCTGTACTACCTG 3543 ||||| |||| | |||| Sbjct 6535 CAGTACCTGTGGTTCCTG 6518 Score = 158 bits (174), Expect = 4e-35 Identities = 228/322 (71%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 2307 AGCGAACCAACAACACCAGGACAACCGTCGGGGTCTTGTGCTTCCGGGTTACAAATACCT 2366 |||||| || || | || ||| | || |||||||| |||| ||| || || ||||| Sbjct 7754 AGCGAATCAGCAGAAGCAAGACTCCTCACGTGGTCTTGTCCTTCTGGGGTATAAGTACCT 7695 Query 2367 CGGACCCGGTAACGGACTCGACAAAGGAGAGCCGGTCAACGAGGCGGACGCGGCAGCCCT 2426 ||||||| ||||| || || ||||| |||| || ||| || |||| | || Sbjct 7694 CGGACCCTTCAACGGCCTTGATAAAGGCCAGCCCGTGAACAGAGCCAACGCCGTCACCAA 7635 Query 2427 CGAACACGACAAAGCTTACGACCAGCAGCTCAAGGCCGGTGACAACCCGTACCTCAAGTA 2486 || ||||| | |||||| | | || ||| || ||| ||||| || || |||||||| Sbjct 7634 GGAGCACGATGAGGCTTACAATCGGCTGCTTGAGAGCGGAGACAATCCATATCTCAAGTA 7575 Query 2487 CAACCACGCCGACGCCGAGTTTCAGGAGCGTCTTCAAGAAGATACGTCTTTTGGGGGCAA 2546 ||| ||||| ||||| ||||| || ||| || |||||||| | || || || | Sbjct 7574 CAATCACGCGGACGCGGAGTTCCAAGAGAAGCTCCAAGAAGACTCCAGCTTCGGAGGGAC 7515 Query 2547 CCTTGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGATCCTTGAGCCTCTTGGTCTGGTTGA 2606 ||| || | ||||||||| |||||||| || ||| | || || ||| ||| | |||| || Sbjct 7514 CCTCGGAAAAGCAGTCTTTCAGGCCAAGAAAAGGGTTCTCGAACCTTTTGATTTGGTCGA 7455 Query 2607 GGAAGCAGCTAAAACGGCTCCT 2628 | | | | ||| ||||||||| Sbjct 7454 GAAGCCTGTTAAGACGGCTCCT 7433 Score = 78.8 bits (86), Expect = 3e-11 Identities = 109/153 (71%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 1101 CAGATCAAGGCCGCGCTGGACAATGCCTCCAAGATCATGAGCCTGACAAAGACGGCTCCG 1160 ||| ||||| ||| || |||| |||| || | | |||| ||||| ||||| || | Sbjct 8531 CAGGTCAAGCGCGCCCTCCACAACGCCTGCAGGCTGATGACGCTGACCAAGACCGCCTCC 8472 Query 1161 GACTACCTGGTGGGCAGCAACCCGCCGGAGGACATTACCAAAAATCGGATCTACCAAATC 1220 | ||||| | || | | |||| | |||||| | || || |||||| ||| Sbjct 8471 AATTACCTCATAGGGAAGGAGACGCCCGCGGACATCTCGCGGAACCGCATCTACTGGATC 8412 Query 1221 CTGGAGCTGAACGGGTACGATCCGCAGTACGCG 1253 |||||||||||||| |||||||||| ||||||| Sbjct 8411 CTGGAGCTGAACGGCTACGATCCGCTGTACGCG 8379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14979533310680