Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq87054 316 6e-83 seq137177 96.9 1e-16 >seq87054 Length=8607 Score = 316 bits (350), Expect = 6e-83 Identities = 491/689 (71%), Gaps = 23/689 (3%) Strand=Plus/Minus Query 2886 ACAAGGTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTC 2945 |||||||||||||||| | |||||| ||||||| ||||||||||||||||| ||| Sbjct 7193 ACAAGGTGCCGATGGAATCGGTAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGAT 7134 Query 2946 TGAGGGCCACGTCACGACCACCAGCACCAGAACCTGGGTCTTGCCCACCTACAACAACCA 3005 || | || || ||| | ||||||||||||||| | |||| |||||||||||| Sbjct 7133 GGACGACCGAGTGCTCACCCGAACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCA 7074 Query 3006 CCTCTACAAG-CGACTCGGAGAGAGCCTGCAGTCCAA-CACCTACAACGGATTCTCCACC 3063 ||||| ||| ||| || | ||| ||| || || | |||| | |||| Sbjct 7073 TCTCTATAAGGCGA-TC----AACGCCGGCAACGAAAACAAGTGGTTTGGATACAGCACC 7019 Query 3064 CCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACGTGACTGGCAG 3123 |||||||||||||||||||||||||| ||||||||||||||| | || || ||||||||| Sbjct 7018 CCCTGGGGATACTTTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAG 6959 Query 3124 CGACTCATCAACAACAACTGGGGCATGC-GACCCAAAGCCATGCGGGTCAAAATCTTCAA 3182 | ||||||||||||| | ||| || | ||||||| |||| |||| ||| ||| Sbjct 6958 CAACTCATCAACAACTA-TGG---ATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAA 6903 Query 3183 CATCCAGGTCAAGGAGGTCACGACGTCGAACGGCGAGACAACGGTGGCTAATAACCTTAC 3242 |||||| | |||||||||||||||| | || | | ||||| | || |||||||| || Sbjct 6902 CATCCAAGCCAAGGAGGTCACGACGCAGGACAGTGTCACAACCATCGCCAATAACCTCAC 6843 Query 3243 CAGCACGGTTCAGATCTTTGCGGACTCGTCGTACGAACTGCCGTACGTGAT-GGATGCGG 3301 |||| |||| | | |||||| |||| || || | || || |||||| | || || Sbjct 6842 CAGCTCGGTGCCGGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGC 6783 Query 3302 GTCAAGAGGGCAGCCTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTACGGCT 3361 | || |||||| ||||| || || || ||| | ||| | | || |||||||||| Sbjct 6782 G-CACAAGGGCACGCTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCT 6724 Query 3362 ACTGTGGACTGGTGACCGGCAACACTTCGCAGCAACAGACTGACAGAAATGCCTTCTACT 3421 || || | | || || || |||| || | | | |||||||||| Sbjct 6723 ACCTCACAC---TCAACGACAGCA----ACAGCGCCATCCGG--CGGGGGGCCTTCTACT 6673 Query 3422 GCCTGGAGTACTTTCCTTCGCAGATGCTGCGGACTGGCAACAACTTTGAAATTACGTACA 3481 || | |||||||| || |||||||| |||| |||||||||||||| | ||| Sbjct 6672 GCTTTGAGTACTTCCCGAGCCAGATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACG 6613 Query 3482 GTTTTGAGAAGGTGCCTTTCCACTCGATGTACGCGCACAGCCAGAGCCTGGACCGGCTGA 3541 |||||| | ||||| |||||||||| ||| |||| || || | || || | Sbjct 6612 AGTTTGAGGACGTGCCCTTCCACTCGAGCTACATGCACTCTCAATTGCTCTATCGACTCA 6553 Query 3542 TGAACCCTCTCATCGACCAGTACCTGTGG 3570 |||| |||||||| ||||||||||||||| Sbjct 6552 TGAATCCTCTCATGGACCAGTACCTGTGG 6524 Score = 188 bits (208), Expect = 2e-44 Identities = 241/331 (73%), Gaps = 1/331 (0%) Strand=Plus/Minus Query 2347 AAACCCAAG-GCAAATCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTCCGGGTTA 2405 ||| || || || ||||| || | || ||| | | || |||||||| |||| ||| || Sbjct 7763 AAAGCCGAGAGCGAATCAGCAGAAGCAAGACTCCTCACGTGGTCTTGTCCTTCTGGGGTA 7704 Query 2406 CAAATACCTCGGACCCGGCAACGGACTCGACAAGGGGGAACCCGTCAACGCAGCGGACGC 2465 || |||||||||||| |||||| || || || || | ||||| ||| ||| |||| Sbjct 7703 TAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAGCCCGTGAACAGAGCCAACGC 7644 Query 2466 GGCAGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAGGCCGGTGACAACCCCTA 2525 | || |||||||| |||| ||| | | || ||| || ||| ||||| || || Sbjct 7643 CGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTTGAGAGCGGAGACAATCCATA 7584 Query 2526 CCTCAAGTACAACCACGCCGACGCGGAGTTCCAGCAGCGGCTTCAGGGCGACACATCGTT 2585 ||||||||||| ||||| |||||||||||||| || ||| || | ||| | || Sbjct 7583 TCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAAGCTCCAAGAAGACTCCAGCTT 7524 Query 2586 TGGGGGCAACCTCGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGGTTCTTGAACCTCTTGG 2645 || || | |||||| | ||||||||| |||||||| || |||||||| |||||| ||| Sbjct 7523 CGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAAAAGGGTTCTCGAACCTTTTGA 7464 Query 2646 TCTGGTTGAGCAAGCGGGTGAGACGGCTCCT 2676 | |||| ||| | | | | ||||||||||| Sbjct 7463 TTTGGTCGAGAAGCCTGTTAAGACGGCTCCT 7433 Score = 93.3 bits (102), Expect = 1e-15 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 1079 CACGTCAGAAAAGCAATGGATCCAGGAGGACCAGGCGTCCTACATCTCCTTCAACGCCGC 1138 ||| || || || | ||| || ||| ||| |||| |||||| | | | | ||||| | Sbjct 8607 CACCTCGGAGCAGAAGTGGGTCTAGGTAGACAAGGCATCCTACCTGTGGTACCACGCCTC 8548 Query 1139 CTCCAACTCGCGGTCACAAATCAAGGCCGCGCTGGACAATGCCTCCAAAATCATGAGCCT 1198 | ||| | | || ||||| ||| || |||| |||| || | |||| || Sbjct 8547 AGGAACATCGAGCGCTCAGGTCAAGCGCGCCCTCCACAACGCCTGCAGGCTGATGACGCT 8488 Query 1199 GACAAAGACGGCTCCGGACTACCTGGTGGGCCAGAACCCGCCGGAGGACATTTCCAGCAA 1258 ||| ||||| || | | ||||| | || || | |||| | |||||| || | || Sbjct 8487 GACCAAGACCGCCTCCAATTACCTCATAGGGAAGGAGACGCCCGCGGACATCTCGCGGAA 8428 Query 1259 CCGCATCTACCGAATCCTCGAGATGAACGGGTACGATCCGCAGTACGCG 1307 |||||||||| | ||||| ||| ||||||| |||||||||| ||||||| Sbjct 8427 CCGCATCTACTGGATCCTGGAGCTGAACGGCTACGATCCGCTGTACGCG 8379 >seq137177 Length=6214 Score = 96.9 bits (106), Expect = 1e-16 Identities = 131/182 (72%), Gaps = 12/182 (7%) Strand=Plus/Minus Query 2964 CACCAGCACCA---GAACCTGGGTCTTGCCCACCTACAACAACCACCTCTACAAG----- 3015 |||||| |||| ||||| |||| |||||| ||||||| ||||||| |||||| Sbjct 182 CACCAGAACCAACGGAACCCGGGTGCTGCCCAGCTACAACCACCACCTGTACAAGGCCAT 123 Query 3016 CGACTCGGAGAGAGCCTGCAGTC----CAACACCTACAACGGATTCTCCACCCCCTGGGG 3071 |||| | | | || || | ||||| | | ||| | ||| ||||| || Sbjct 122 CGACACCGGCAACTCCATCAATGAGCACAACAAGTGGTTCAGATACAGCACACCCTGAGG 63 Query 3072 ATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCAT 3131 | ||| |||||||||||| | ||||||||||| |||||| | | ||||||||||||||| Sbjct 62 ACACTGTGACTTCAACCGATGTCACTGCCACTTTTCACCAAGAGGCTGGCAGCGACTCAT 3 Query 3132 CA 3133 || Sbjct 2 CA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15110456539360