Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq87054 437 3e-119 seq137177 93.3 1e-15 >seq87054 Length=8607 Score = 437 bits (484), Expect = 3e-119 Identities = 532/733 (73%), Gaps = 18/733 (2%) Strand=Plus/Minus Query 2828 AATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGCGCCGACGGAGTGGG 2887 ||||||||||||||||||||| ||||||| ||||| | |||| ||||| ||| | || Sbjct 7232 AATGGCTTCAGGCGGTGGCGCGCCAATGGGCAACAATCAACAAGGTGCCGATGGAATCGG 7173 Query 2888 TAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAGAGTCATCACCAN 2947 |||| |||| ||||||||||||||||||||| ||| ||| |||| |||| ||||| Sbjct 7172 TAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCACCCG 7113 Query 2948 NNNNNNNNNNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACAAGCAAATCTCCAG 3007 | |||| |||||| ||||| ||||| ||| ||| Sbjct 7112 AACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATC----- 7058 Query 3008 TGCTTCAACGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCACCCCCTGGGGGTA 3067 |||| || ||||||| ||| | | || || ||||||||||||||||| || Sbjct 7057 ------AACG----CCGGCAACGAAAACAAGTGGTTTGGATACAGCACCCCCTGGGGATA 7008 Query 3068 TTTTGATTTCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGCAGCGACTCATCAA 3127 ||||| |||||| |||||||||||||||| | || || |||||||||| ||||||||| Sbjct 7007 CTTTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACTCATCAA 6948 Query 3128 CAACAATTGGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCAACATCCAAGTCAA 3187 |||| || |||||| | |||||| | | ||||||| |||| ||||||||||| ||| Sbjct 6947 CAACTAT---GGATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAACATCCAAGCCAA 6891 Query 3188 GGAGGTCACGACGAATGATGGCGTCACAACCATCGCTAATAACCTTACCAGCACGGTTCA 3247 ||||||||||||| | || | |||||||||||||| |||||||| |||||| |||| | Sbjct 6890 GGAGGTCACGACGCAGGACAGTGTCACAACCATCGCCAATAACCTCACCAGCTCGGTGCC 6831 Query 3248 AGTCTTCTCGGACTCGGAGTACCAGCTTCCGTACGTCCTCGGCTCTGCGCACCAGGGCTG 3307 ||||| |||| |||| || | || || ||||| || ||| |||||| ||||| Sbjct 6830 GGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGCGCACAAGGGCAC 6771 Query 3308 CCTCCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATACGGCTACCTGACGCTCAA 3367 || || || |||||||| ||| |||| | | ||||| ||||||||||| || ||||| Sbjct 6770 GCTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCTACCTCACACTCAA 6711 Query 3368 CAATGGCAGCCAAGCCGTGGGACGTTCATCCTTTTACTGCCTGGAATATTTCCCTTCTCA 3427 | | ||| | ||| | | || |||| |||||| | || || ||||| || Sbjct 6710 CGACAGCAACAGCGCCATCCGGCGGGGGGCCTTCTACTGCTTTGAGTACTTCCCGAGCCA 6651 Query 3428 GATGCTGAGAACGGGCAACAACTTTACCTTCAGCTACACCTTTGAGGAAGTGCCTTTCCA 3487 |||||| || || |||||||||||| ||| |||| |||||||| ||||| ||||| Sbjct 6650 GATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACGAGTTTGAGGACGTGCCCTTCCA 6591 Query 3488 CAGCAGCTACGCGCACAGCCAGAGCCTGGACCGGCTGATGAATCCTCTCATCGACCAATA 3547 | |||||| |||| || || | || || |||||||||||||| ||||| || Sbjct 6590 CTCGAGCTACATGCACTCTCAATTGCTCTATCGACTCATGAATCCTCTCATGGACCAGTA 6531 Query 3548 CCTGTATTACCTG 3560 ||||| | |||| Sbjct 6530 CCTGTGGTTCCTG 6518 Score = 185 bits (204), Expect = 3e-43 Identities = 256/353 (73%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 2292 GACTTGAAACCTGGAGCCCCGAAGCCCAAAGCCAACCAGCAAAAGCAGGACGACGGCCGG 2351 ||| | ||||| || || ||||| | ||| || ||||| ||||| ||| | || Sbjct 7783 GACCTCAAACCCGGCCGGCCAAAGCCGAGAGCGAATCAGCAGAAGCAAGACTCCTCACGT 7724 Query 2352 GGTCTGGTGCTTCCTGGCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAG 2411 ||||| || |||| || || ||||||||||||||||||||||| || || || || || Sbjct 7723 GGTCTTGTCCTTCTGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAG 7664 Query 2412 CCCGTCAACGCGGCGGACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTC 2471 ||||| ||| || |||| | || |||||||| |||| ||| | | || ||| Sbjct 7663 CCCGTGAACAGAGCCAACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTT 7604 Query 2472 AA-AGCGGGTGACAATCCGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCG 2530 | ||||| |||||||| || || ||| || ||||| ||||| ||||| || ||| Sbjct 7603 GAGAGCGGA-GACAATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAA 7545 Query 2531 TCTGCAAGAAGATACGTCTTTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAA 2590 || |||||||| | || || || | |||||| ||||||||| ||||||||||| Sbjct 7544 GCTCCAAGAAGACTCCAGCTTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAA 7485 Query 2591 GCGGGTTCTCGAACCTCTCGGTCTGGTTGAGGAAGGC-GCTAAGACGGCTCCT 2642 |||||||||||||| | | | |||| ||| ||| | | ||||||||||||| Sbjct 7484 AAGGGTTCTCGAACCTTTTGATTTGGTCGAG-AAGCCTGTTAAGACGGCTCCT 7433 Score = 107 bits (118), Expect = 6e-20 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 1042 CACCTCCGAGAAGCAGTGGATCCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGC 1101 |||||| ||| || ||||| || ||| ||| |||| || ||| | | | | ||||| | Sbjct 8607 CACCTCGGAGCAGAAGTGGGTCTAGGTAGACAAGGCATCCTACCTGTGGTACCACGCCTC 8548 Query 1102 TTCCAACTCGCGGTCCCAGATCAAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCT 1161 | ||| | | ||| ||||| ||| || |||| ||| ||| | | ||| |||| Sbjct 8547 AGGAACATCGAGCGCTCAGGTCAAGCGCGCCCTCCACAACGCCTGCAGGCTGATGACGCT 8488 Query 1162 GACCAAATCCGCGCCCGACTACCTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAA 1221 |||||| |||| || | ||||| |||| | ||||||||||||| || Sbjct 8487 GACCAAGACCGCCTCCAATTACCTCATAGGGAAGGAGACGCCCGCGGACATCTCGCGGAA 8428 Query 1222 CCGCATCTACCGCATCCTGGAGCTGAACGGCTACGAACC 1260 |||||||||| | ||||||||||||||||||||||| || Sbjct 8427 CCGCATCTACTGGATCCTGGAGCTGAACGGCTACGATCC 8389 >seq137177 Length=6214 Score = 93.3 bits (102), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 9/162 (6%) Strand=Plus/Minus Query 2968 TGCCCACCTACAATAACCACCTCTACAAGCAAATCTCCAGTGCTTCAACGGGGGCCAGCA 3027 |||||| |||||| ||||||| |||||| ||| || | |||| ||| || Sbjct 156 TGCCCAGCTACAACCACCACCTGTACAAGGCCATCGACACCGG--CAACT----CCATCA 103 Query 3028 ACGA---CAACCACTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATTTCAACAGAT 3084 | || |||| | | ||| | |||||||| ||||| || | | ||| |||||| ||| Sbjct 102 ATGAGCACAACAAGTGGTTCAGATACAGCACACCCTGAGGACACTGTGACTTCAACCGAT 43 Query 3085 TCCACTGCCACTTTTCACCACGTGACTGGCAGCGACTCATCA 3126 |||||||||||||||||| | | ||||||||||||||||| Sbjct 42 GTCACTGCCACTTTTCACCAAGAGGCTGGCAGCGACTCATCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14953987314840