Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq87054 251 2e-63 >seq87054 Length=8607 Score = 251 bits (278), Expect = 2e-63 Identities = 479/695 (69%), Gaps = 34/695 (5%) Strand=Plus/Minus Query 3086 GGTGCCGATGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGA 3145 |||||||||||| | |||||| |||| |||||||||||||||||||||| ||| ||| Sbjct 7189 GGTGCCGATGGAATCGGTAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGAC 7130 Query 3146 GACACAGTCATTACCAAGACTACAAGAACCTGGGTCCTGCCAAGCTACAACAACCACATG 3205 ||| ||| | ||| || || ||||||||||| || || |||||||||||||| | Sbjct 7129 GACCGAGTGCTCACCCGAACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTC 7070 Query 3206 TACCAAGCCATCACAAGCGGAACAAACCCAGACTCAAATACCCAATATGCTGGATACAGC 3265 || | || |||| ||| | || ||| | | | |||||||||| Sbjct 7069 TATAAGGCGATCAACGCCGGCA---------ACGAAAACA---AGTGGTTTGGATACAGC 7022 Query 3266 ACCCCCTGGGGGTACTTTGATTTCAACAGATTCCACTGCCATTTCTCTCCAAGAGACTGG 3325 ||||||||||| |||||||| |||||| ||||||||||||| ||| | || |||||||| Sbjct 7021 ACCCCCTGGGGATACTTTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGG 6962 Query 3326 CAGAGACTCATCAACAACCATTGGGGGATT-AGACCGAAAGCACTCAAATTCAAGATATT 3384 ||| ||||||||||||| || ||||| ||||| || | | |||||| | | Sbjct 6961 CAGCAACTCATCAACAACTAT----GGATTCAGACCCAAGTGGATGCACTTCAAGCTCTC 6906 Query 3385 CAATGTGCAAGTTAAAGAAGTCACGACGCAAGACCA-GACAAAGACTATTGCTAACAACC 3443 ||| | |||| || || ||||||||||| ||| | || | || || || || |||| Sbjct 6905 CAACATCCAAGCCAAGGAGGTCACGACGCAGGACAGTGTCACA-ACCATCGCCAATAACC 6847 Query 3444 TTACCTCTACAATCCAGATATTCACGGATAATGAACACCAGCTGCCCTATGTTCTGGGCT 3503 | ||| | | | | | || ||| | || | | || ||||| || || ||| Sbjct 6846 TCACCAGCTCGGTGCCGGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCA 6787 Query 3504 CGGC-CACGGAGGGGACGATGCCACCGTTCCCCTCAGATGTGTATGCCTTGCCCCAGTAC 3562 || ||| |||| ||| ||||||| ||||| |||| ||| | | || |||||| Sbjct 6786 ACGCGCACA-AGGGCACGCTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTAC 6728 Query 3563 GGCTACTGCACAATGCACACCAACCAGAGTGGAGCGAGATTCAATGACAGAAGTGCCTTC 3622 |||||| |||| | || || | | |||| || | | | | | |||||| Sbjct 6727 GGCTACCTCACACTCAACGACAGCAA-----CAGCGCCATCC---GGC-GGGGGGCCTTC 6677 Query 3623 TATTGCTTAGAGTACTTCCCCAGTCAGATGCTGAGAACAGGGAATAATTTTGAATTCAGT 3682 || ||||| ||||||||||| || |||||||| || || || || || ||||| ||| Sbjct 6676 TACTGCTTTGAGTACTTCCCGAGCCAGATGCTCAGGACCGGCAACAACTTTGAGTTCGTC 6617 Query 3683 TTTGAGTTTGAAGAAGTTCCCTTCCATAGCATGTTCGCTCATTCACAGGATT--TAGACA 3740 | |||||||| || || |||||||| | | | || || || ||| | | Sbjct 6616 TACGAGTTTGAGGACGTGCCCTTCCACTCGAGCTACATGCACTCTCA--ATTGCTCTATC 6559 Query 3741 GGCTAATGAATCCTCTCCTAGATCAGTACCTGTGG 3775 | || |||||||||||| | || |||||||||||| Sbjct 6558 GACTCATGAATCCTCTCATGGACCAGTACCTGTGG 6524 Score = 109 bits (120), Expect = 2e-20 Identities = 198/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 2607 TTGTACTTCCTGGCTATAAGTATGTTGGGCCTGGTAACGGCCTTGATAAAGGGCCACCTG 2666 |||| |||| || |||||||| | || || ||||||||||||||||| | || | Sbjct 7719 TTGTCCTTCTGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAGCCCG 7660 Query 2667 TCAATAAAGCGGACAGCGTCGCGCTTGAGCACGATAAAGCGTACGACCAGCAGCTCAAGG 2726 | || | ||| || |||| | ||||||||| | || ||| | | || ||| || Sbjct 7659 TGAACAGAGCCAACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTTGAGA 7600 Query 2727 CAGGAGACAACCCCTATATAAAATTTAAGCACGCAGATCAAGAATTTATAGATAATCTGC 2786 |||||||| || ||| | || | || ||||| || || || ||| || || | Sbjct 7599 GCGGAGACAATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAAGCTCC 7540 Query 2787 AAGGTGATACCTCCTTTGGAGGCAACCTCGGAAAAGCCGTATTCCAAGCTaaaaaaaGAA 2846 ||| || || ||| ||||| | |||||||||||| || || || || || ||||| Sbjct 7539 AAGAAGACTCCAGCTTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAAAAGGG 7480 Query 2847 TTCTAGAGCCTTTAGGCCTAGTAGAAGAACCTGTAAACATGGCTCCTGCT 2896 |||| || ||||| | | || || | ||||| || | ||||||| || Sbjct 7479 TTCTCGAACCTTTTGATTTGGTCGAGAAGCCTGTTAAGACGGCTCCTCCT 7430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16275992599560