Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq87054 185 2e-43 >seq87054 Length=8607 Score = 185 bits (204), Expect = 2e-43 Identities = 333/485 (69%), Gaps = 34/485 (7%) Strand=Plus/Minus Query 2600 ATGGCTACAGGAGGAGGCGGTCCGATGGCAGACGATAACCAGGGCGCCGAGGGAGTGGGT 2659 |||||| |||| || |||| || |||| || || | || || ||||| ||| | ||| Sbjct 7231 ATGGCTTCAGGCGGTGGCGCGCCAATGGGCAACAATCAACAAGGTGCCGATGGAATCGGT 7172 Query 2660 AATTCCTCAGGTGATTGGCATTGCGATACCAAGTGGATGGGAGACCACGTCATTACAAAG 2719 |||||||| || |||||||||||||| || ||||||| |||| || | || Sbjct 7171 AATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCACCCGA 7112 Query 2720 TCAACCAGAACTTGGGTGCTCCCCACTTACGGGAATCATCTCTACGGGCCTATCAACTTT 2779 | |||||||| ||||||||||||| ||| || |||||||| | | |||||| Sbjct 7111 ACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATCAAC--- 7055 Query 2780 GACGGCACC----ACAGGTTCGGGTGCTAATGCAGCCTATGCAGGATACAAGACTCCCTG 2835 | ||||| | ||| || ||| ||||||| || ||||| Sbjct 7054 GCCGGCAACGAAAACAAGT---GGTTT----------------GGATACAGCACCCCCTG 7014 Query 2836 GGGGTACTTTGACTTCAATCGATTCCATTGCCACTTCTCCCCCCGAGACTGGCAAAGACT 2895 ||| |||||||||||||| |||||||| ||||||||| | |||||||||||||| ||| Sbjct 7013 GGGATACTTTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACT 6954 Query 2896 CATCAACAACCACACAGGCATCAGGCCGAAAGGACTCAAAATCAAAGTCTTTAACGTCCA 2955 |||||||||| | || |||| || || | | | |||| ||| ||| |||| Sbjct 6953 CATCAACAACTA---TGGATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAACATCCA 6897 Query 2956 AGTCAAAGAAGTTACAACACAAGATTCAACG--AAAACAATTGCCAACAATCTCACCAGC 3013 || ||| || || || || || || || | | ||| || ||||| || ||||||||| Sbjct 6896 AGCCAAGGAGGTCACGACGCAGGA--CAGTGTCACAACCATCGCCAATAACCTCACCAGC 6839 Query 3014 ACCGTACAGATCTTTGCGGACGAGAACTACGACTTACCATATGTATTAGGCAGTGCTACA 3073 | || | | |||||| |||| | |||| | |||| || || |||||| || || Sbjct 6838 TCGGTGCCGGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGC-GCA 6780 Query 3074 CAAGG 3078 ||||| Sbjct 6779 CAAGG 6775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14040717963560