Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq87054 480 2e-132 seq137177 105 2e-19 seq77957 82.4 2e-12 >seq87054 Length=8607 Score = 480 bits (532), Expect = 2e-132 Identities = 570/772 (74%), Gaps = 28/772 (4%) Strand=Plus/Minus Query 2799 CAGCAGCGCCCTCTAGTGTGGGATCTGGTACAGTGGCTGCAGGCGGTGGCGCACCAATGG 2858 ||||| |||| | |||| ||| | | | ||||| ||||||||||||| ||||||| Sbjct 7263 CAGCACTGCCCGCGAGTGCAGGAGATATTGAAATGGCTTCAGGCGGTGGCGCGCCAATGG 7204 Query 2859 CAGACAATAACGAAGGTGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATT 2918 ||||| | |||||||||| ||| | |||||| |||| ||||||||||||||||||| Sbjct 7203 GCAACAATCAACAAGGTGCCGATGGAATCGGTAATTCCTCGGGAAATTGGCATTGCGATT 7144 Query 2919 CCACATGGCTGGGCGACAGAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCT 2978 || ||| ||| |||| |||| | ||| | |||| ||||||||| || |||| || Sbjct 7143 CCCTTTGGATGGACGACCGAGTGCTCACCCGAACCACCAGAACCTGGGTGCTCCCCAGCT 7084 Query 2979 ACAACAACCACCTCTACAAGCAAATCTCCAGTGAAACTGCAGGTAGTACCAACGACAACA 3038 |||||||||| ||||| ||| ||| ||| || || |||||| |||| Sbjct 7083 ACAACAACCATCTCTATAAGGCGATC--------AAC-GCCGG------CAACGAAAACA 7039 Query 3039 CCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACT 3098 | || || ||||||||||||||||| || |||||||| ||| ||||||||||||||| Sbjct 7038 AGTGGTTTGGATACAGCACCCCCTGGGGATACTTTGACTTCAACCGATTCCACTGCCACT 6979 Query 3099 TCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAAGC 3158 || | || || |||||||||| ||||||||||||| | |||||| | |||||| | Sbjct 6978 TCCCGCCCCGAGACTGGCAGCAACTCATCAACAACTAT---GGATTCAGACCCAAGTGGA 6922 Query 3159 TGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTACGA 3218 ||| |||||||||| ||||||||| | |||||||||||||||| | ||| | || || | Sbjct 6921 TGCACTTCAAGCTCTCCAACATCCAAGCCAAGGAGGTCACGACGCAGGACAGTGTCACAA 6862 Query 3219 CCATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGCTGC 3278 ||||||| |||||||| |||||| || | | ||| || |||| |||| || | || | Sbjct 6861 CCATCGCCAATAACCTCACCAGCTCGGTGCCGGTCTTTGTGGACACGGACTATAATCTAC 6802 Query 3279 CGTACGTCCTCGGCTCTGCGCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCTTCA 3338 | ||||| || ||| |||||| ||||| ||||| || |||||||| ||| | || Sbjct 6801 CCTACGTGCTAGGCAACGCGCACAAGGGCACGCTGCCACCCTTCCCGGCAGACATGTTTC 6742 Query 3339 TGATTCCTCAGTACGGCTACCTGACTCTCAACAATGGCA-----GTCAGTCTGTGGGACG 3393 | | || |||||||||||||| || |||||| | ||| | || | | ||| | Sbjct 6741 AGCTACCGCAGTACGGCTACCTCACACTCAACGACAGCAACAGCGCCATCCGGCGGGGGG 6682 Query 3394 TTCCTCCTTCTACTGCCTGGAGTACTTCCCCTCTCAGATGCTGAGAACGGGCAACAACTT 3453 ||||||||||| | ||||||||||| |||||||| || || ||||||||||| Sbjct 6681 -----CCTTCTACTGCTTTGAGTACTTCCCGAGCCAGATGCTCAGGACCGGCAACAACTT 6627 Query 3454 TGAGTTCAGCTACAGCTTCGAGGACGTGCCTTTCCACAGCAGCTACGCACACAGCCAGAG 3513 ||||||| |||| || ||||||||||| |||||| |||||| ||| || Sbjct 6626 TGAGTTCGTCTACGAGTTTGAGGACGTGCCCTTCCACTCGAGCTACATGCACTCTCAATT 6567 Query 3514 CCTGGACCGGCTGATGAATCCCCTCATCGACCAGTACTTGTACTACCTGGCC 3565 || | || || |||||||| ||||| ||||||||| ||| | |||| || Sbjct 6566 GCTCTATCGACTCATGAATCCTCTCATGGACCAGTACCTGTGGTTCCTGTCC 6515 Score = 185 bits (204), Expect = 3e-43 Identities = 256/353 (73%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 2291 GACCTGAAACCTGGAGCCCCGAAACCCAAAGCCAACCAGCAAAAGCAGGACAACGGCCGG 2350 ||||| ||||| || || || || | ||| || ||||| ||||| ||| | || Sbjct 7783 GACCTCAAACCCGGCCGGCCAAAGCCGAGAGCGAATCAGCAGAAGCAAGACTCCTCACGT 7724 Query 2351 GGTCTGGTGCTTCCTGGCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAG 2410 ||||| || |||| || || ||||||||||||||||||||||| || || || || || Sbjct 7723 GGTCTTGTCCTTCTGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAG 7664 Query 2411 CCCGTCAACGCGGCGGACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTC 2470 ||||| ||| || |||| | || |||||||| |||| ||| | | || ||| Sbjct 7663 CCCGTGAACAGAGCCAACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTT 7604 Query 2471 AA-AGCGGGTGACAATCCGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCG 2529 | ||||| |||||||| || || ||| || ||||| ||||| ||||| || ||| Sbjct 7603 GAGAGCGGA-GACAATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAA 7545 Query 2530 TCTGCAAGAAGATACGTCATTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAA 2589 || |||||||| | || || || | |||||| ||||||||| ||||||||||| Sbjct 7544 GCTCCAAGAAGACTCCAGCTTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAA 7485 Query 2590 GCGGGTTCTCGAACCTCTCGGTCTGGTTGAGGAAGGC-GCTAAGACGGCTCCT 2641 |||||||||||||| | | | |||| ||| ||| | | ||||||||||||| Sbjct 7484 AAGGGTTCTCGAACCTTTTGATTTGGTCGAG-AAGCCTGTTAAGACGGCTCCT 7433 Score = 102 bits (112), Expect = 2e-18 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 1041 CACCTCCGAGAAGCAGTGGATCCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGC 1100 |||||| ||| || ||||| || ||| ||| |||| || ||| | | | | ||||| | Sbjct 8607 CACCTCGGAGCAGAAGTGGGTCTAGGTAGACAAGGCATCCTACCTGTGGTACCACGCCTC 8548 Query 1101 CTCCAACTCGCGGTCCCAGATCAAGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCT 1160 | ||| | | ||| ||||| ||| || |||| ||| ||| | | ||| |||| Sbjct 8547 AGGAACATCGAGCGCTCAGGTCAAGCGCGCCCTCCACAACGCCTGCAGGCTGATGACGCT 8488 Query 1161 GACCAAATCCGCGCCCGACTACCTGGTGGGGCCCTCGCTGCCCGCGGACATTAAAACCAA 1220 |||||| |||| || | ||||| | ||| | |||||||||||| || Sbjct 8487 GACCAAGACCGCCTCCAATTACCTCATAGGGAAGGAGACGCCCGCGGACATCTCGCGGAA 8428 Query 1221 CCGCATCTACCGCATCCTGGAGCTGAACGGGTACGATCC 1259 |||||||||| | ||||||||||||||||| |||||||| Sbjct 8427 CCGCATCTACTGGATCCTGGAGCTGAACGGCTACGATCC 8389 >seq137177 Length=6214 Score = 105 bits (116), Expect = 2e-19 Identities = 140/193 (73%), Gaps = 5/193 (3%) Strand=Plus/Minus Query 2937 GAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACA 2996 ||||| | |||| | || | ||||| ||| ||||||| ||||||| ||||||| |||| Sbjct 189 GAGTCCTCACCAGAACCAACGGAACCCGGGTGCTGCCCAGCTACAACCACCACCTGTACA 130 Query 2997 AGCAAATCTCCAGTGA-AACTGCAGGTAGTACCAACGACAACACCTACTTCGGCTACAGC 3055 || ||| || | |||| || | | || ||||| | ||| | |||||| Sbjct 129 AGGCCATCGACACCGGCAACTCCATCAATGAGCA----CAACAAGTGGTTCAGATACAGC 74 Query 3056 ACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGG 3115 || ||||| || | | |||||| ||| ||| ||||||||||| |||||| | | |||| Sbjct 73 ACACCCTGAGGACACTGTGACTTCAACCGATGTCACTGCCACTTTTCACCAAGAGGCTGG 14 Query 3116 CAGCGACTCATCA 3128 ||||||||||||| Sbjct 13 CAGCGACTCATCA 1 >seq77957 Length=1537 Score = 82.4 bits (90), Expect = 2e-12 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 4035 GCATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATTCCTC 4094 ||||||||||||||| |||||| ||||| | | || | |||||||||| | || Sbjct 67 GCATGGTCTGGCAGAGTCGGGACATGTACTTCAACGGGCAGGTCTGGGCCAACACCCCAG 126 Query 4095 ACACGGATGGCAACTTTCACCCGTCTCCTTTGATGGGCGGCTTTGGACTTAAACATCCGC 4154 |||| || |||| || || || | || |||| || || || ||||| | | | |||| Sbjct 127 ACACCGAAGGCAGCTCCCATCCACCGCCGCTGATTGGAGGGTTCGGACTGAGAAAACCGC 186 Query 4155 CTCCTCAGATCCTGATCAAGAACACTCCCG 4184 |||||||| || ||||| | ||| |||| Sbjct 187 CTCCTCAGGCACTCATCAAAACCACGCCCG 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14963567063280