Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006261.1 Length=4393 Score E Sequences producing significant alignments: (Bits) Value seq87054 450 4e-123 seq137177 116 1e-22 seq77957 84.2 6e-13 >seq87054 Length=8607 Score = 450 bits (498), Expect = 4e-123 Identities = 557/760 (73%), Gaps = 23/760 (3%) Strand=Plus/Minus Query 2698 CAGCAGCGCCCTCTGGTGTGGGACCTAATACAATGGCTGCAGGCGGTGGCGCACCAATGG 2757 ||||| |||| | ||| ||| || | ||||||| ||||||||||||| ||||||| Sbjct 7263 CAGCACTGCCCGCGAGTGCAGGAGATATTGAAATGGCTTCAGGCGGTGGCGCGCCAATGG 7204 Query 2758 CAGACAATAACGAAGGCGCCGACGGAGTGGGTAGTTCCTCGGGAAATTGGCATTGCGATT 2817 ||||| | |||| ||||| ||| | |||| |||||||||||||||||||||||||| Sbjct 7203 GCAACAATCAACAAGGTGCCGATGGAATCGGTAATTCCTCGGGAAATTGGCATTGCGATT 7144 Query 2818 CCACATGGCTGGGCGACAGAGTCATCACCACCAGCACCCGAACCTGGGCCCTGCCCACCT 2877 || ||| ||| |||| |||| ||||| | |||| ||||||||| || |||| || Sbjct 7143 CCCTTTGGATGGACGACCGAGTGCTCACCCGAACCACCAGAACCTGGGTGCTCCCCAGCT 7084 Query 2878 ACAACAACCACCTCTACAAGCAAATCTCCAACGGGACATCGGGAGGAGCCACCAACGACA 2937 |||||||||| ||||| ||| ||| |||| ||| |||||| | Sbjct 7083 ACAACAACCATCTCTATAAGGCGATC---AACGC-----CGG----------CAACGAAA 7042 Query 2938 ACACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCC 2997 ||| | || || ||||||||||||||||| || |||||||| ||| |||||||||||| Sbjct 7041 ACAAGTGGTTTGGATACAGCACCCCCTGGGGATACTTTGACTTCAACCGATTCCACTGCC 6982 Query 2998 ACTTTTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGA 3057 |||| | || || |||||||||| ||||||||||||| | |||||| | |||||| Sbjct 6981 ACTTCCCGCCCCGAGACTGGCAGCAACTCATCAACAACTAT---GGATTCAGACCCAAGT 6925 Query 3058 GACTCAGCTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGCAGAATGAAGGCACCA 3117 | | ||||||||||| ||||||||| | ||||||||||||| | | || | || Sbjct 6924 GGATGCACTTCAAGCTCTCCAACATCCAAGCCAAGGAGGTCACGACGCAGGACAGTGTCA 6865 Query 3118 AGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTACGGACTCGGAGTACCAGC 3177 |||||||||||||||||||||||| | | | ||| ||| |||| |||| || | | Sbjct 6864 CAACCATCGCCAATAACCTCACCAGCTCGGTGCCGGTCTTTGTGGACACGGACTATAATC 6805 Query 3178 TGCCGTACGTTCTCGGCTCTGCCCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTGT 3237 | || ||||| || ||| || ||| ||||| ||||| || |||||||| ||| ||| Sbjct 6804 TACCCTACGTGCTAGGCAACGCGCACAAGGGCACGCTGCCACCCTTCCCGGCAGACATGT 6745 Query 3238 TCATGATTCCCCAGTACGGCTACCTAACACTCAACAACGGTAGTCAG-GCCGTGGGACGC 3296 | | | || |||||||||||||| ||||||||| || | | ||| ||| | | || Sbjct 6744 TTCAGCTACCGCAGTACGGCTACCTCACACTCAACGACAGCA-ACAGCGCCATCCGGCGG 6686 Query 3297 TCCTCCTTCTACTGCCTGGAATACTTTCCTTCGCAGATGCTGAGAACCGGCAACAACTTC 3356 ||||||||||| | || ||||| || |||||||| || |||||||||||||| Sbjct 6685 GGGGCCTTCTACTGCTTTGAGTACTTCCCGAGCCAGATGCTCAGGACCGGCAACAACTTT 6626 Query 3357 CAGTTTACTTACACCTTCGAGGACGTGCCTTTCCACAGCAGCTACGCCCACAGCCAGAGC 3416 |||| ||| || ||||||||||| |||||| |||||| ||| || Sbjct 6625 GAGTTCGTCTACGAGTTTGAGGACGTGCCCTTCCACTCGAGCTACATGCACTCTCAATTG 6566 Query 3417 TTGGACCGGCTGATGAATCCTCTGATTGACCAGTACCTGT 3456 | | || || ||||||||||| || ||||||||||||| Sbjct 6565 CTCTATCGACTCATGAATCCTCTCATGGACCAGTACCTGT 6526 Score = 185 bits (204), Expect = 2e-43 Identities = 243/334 (73%), Gaps = 2/334 (1%) Strand=Plus/Minus Query 2208 CCGAAGCCCAAAGCCAACCAGCAAAAGCAGGACGACGGCCGGGGTCTGGTGCTTCCTGGC 2267 || ||||| | ||| || ||||| ||||| ||| | || ||||| || |||| || Sbjct 7765 CCAAAGCCGAGAGCGAATCAGCAGAAGCAAGACTCCTCACGTGGTCTTGTCCTTCTGGGG 7706 Query 2268 TACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGGAC 2327 || ||||||||||||||||||||||| || || || || ||||||| ||| || || Sbjct 7705 TATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAGCCCGTGAACAGAGCCAAC 7646 Query 2328 GCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTGCAGGCGGGTGACAATCCG 2387 || | || |||||||| |||| ||| | | || ||| || || |||||||| Sbjct 7645 GCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTTGAGAGCGGAGACAATCCA 7586 Query 2388 TACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGTCT 2447 || || ||| || ||||| ||||| ||||| || ||| || |||||||| | Sbjct 7585 TATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAAGCTCCAAGAAGACTCCAGC 7526 Query 2448 TTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTCTC 2507 || || || | |||||| ||||||||| ||||||||||| |||||||||||||| | Sbjct 7525 TTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAAAAGGGTTCTCGAACCTTTT 7466 Query 2508 GGTCTGGTTGAGGAAGGC-GCTAAGACGGCTCCT 2540 | | |||| ||| ||| | | ||||||||||||| Sbjct 7465 GATTTGGTCGAG-AAGCCTGTTAAGACGGCTCCT 7433 Score = 98.7 bits (108), Expect = 3e-17 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 940 CACCTCCGAGAAGCAGTGGATCCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGC 999 |||||| ||| || ||||| || ||| ||| |||| || ||| | | | | ||||| | Sbjct 8607 CACCTCGGAGCAGAAGTGGGTCTAGGTAGACAAGGCATCCTACCTGTGGTACCACGCCTC 8548 Query 1000 CTCCAACTCGCGGTCCCAGATCAAGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCT 1059 | ||| | | ||| ||||| ||| || |||| ||| ||| | | ||| |||| Sbjct 8547 AGGAACATCGAGCGCTCAGGTCAAGCGCGCCCTCCACAACGCCTGCAGGCTGATGACGCT 8488 Query 1060 GACCAAATCCGCGCCCGACTACCTGGTGGGGCCCTCGCTGCCCGCGGACATTACCCAGAA 1119 |||||| |||| || | ||||| | ||| | |||||||||||| | | ||| Sbjct 8487 GACCAAGACCGCCTCCAATTACCTCATAGGGAAGGAGACGCCCGCGGACATCTCGCGGAA 8428 Query 1120 CCGCATCTACCGCATCCTCGCTCTCAACGGCTACGACCC 1158 |||||||||| | ||||| | || ||||||||||| || Sbjct 8427 CCGCATCTACTGGATCCTGGAGCTGAACGGCTACGATCC 8389 >seq137177 Length=6214 Score = 116 bits (128), Expect = 1e-22 Identities = 144/198 (73%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 2836 GAGTCATCACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACA 2895 ||||| |||||| | || | ||||| ||| ||||||| ||||||| ||||||| |||| Sbjct 189 GAGTCCTCACCAGAACCAACGGAACCCGGGTGCTGCCCAGCTACAACCACCACCTGTACA 130 Query 2896 AGCAAATCTCCAACGGGACATCGGGAGGAGCCACCAACGA---CAACACCTACTTCGGCT 2952 || ||| || ||| | || || ||| || ||||| | ||| | | Sbjct 129 AGGCCATCGACACCGGCAACTC---------CATCAATGAGCACAACAAGTGGTTCAGAT 79 Query 2953 ACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTTTCACCACGTG 3012 ||||||| ||||| || | | |||||| ||| ||| |||||||||||||||||| | | Sbjct 78 ACAGCACACCCTGAGGACACTGTGACTTCAACCGATGTCACTGCCACTTTTCACCAAGAG 19 Query 3013 ACTGGCAGCGACTCATCA 3030 ||||||||||||||||| Sbjct 18 GCTGGCAGCGACTCATCA 1 >seq77957 Length=1537 Score = 84.2 bits (92), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 3939 ATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATTCCTCAC 3998 ||||||||||||| |||||| ||||| | | || | |||||||||| | || || Sbjct 69 ATGGTCTGGCAGAGTCGGGACATGTACTTCAACGGGCAGGTCTGGGCCAACACCCCAGAC 128 Query 3999 ACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAAACATCCTCCG 4058 || || |||| || ||| || | |||||||| || || || || |||| | | || || Sbjct 129 ACCGAAGGCAGCTCCCATCCACCGCCGCTGATTGGAGGGTTCGGACTGAGAAAACCGCCT 188 Query 4059 CCTCAGATCCTGATCAAGAACACGCC 4084 |||||| || ||||| | |||||| Sbjct 189 CCTCAGGCACTCATCAAAACCACGCC 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13916181233840