Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq87054 392 1e-105 seq137177 113 1e-21 >seq87054 Length=8607 Score = 392 bits (434), Expect = 1e-105 Identities = 528/729 (72%), Gaps = 27/729 (4%) Strand=Plus/Minus Query 2862 ATGGCTGAAGGAGGTGGCGGTCCAATGGGCGATGCAGGC--CAAGGTGCCGACGGAGTGG 2919 |||||| ||| ||||||| ||||||||| | || | ||||||||||| ||| | | Sbjct 7231 ATGGCTTCAGGCGGTGGCGCGCCAATGGGCAA--CAATCAACAAGGTGCCGATGGAATCG 7174 Query 2920 GCAATTCCTCGGGAAATTGGCATTGCGATTCCCAATGGCTGGACAACGGAGTCGTTACCC 2979 | ||||||||||||||||||||||||||||||| ||| ||||| || |||| | |||| Sbjct 7173 GTAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCACCC 7114 Query 2980 GAACCACTCGAACCTGGGTCCTGCCCAGCTACAACAACCACTTGTACAAGCGGATCCAAG 3039 ||||||| |||||||||| || ||||||||||||||||| | || ||| |||| | | Sbjct 7113 GAACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATCAACG 7054 Query 3040 GACCGGGAGGAACCGACCCCAACAATAAATTCTTTGGATTCAGCACCCCCTGGGGGTACT 3099 ||| | | | || || | ||||||| ||||||||||||||| |||| Sbjct 7053 ------------CCGGCAACGAAAACAAGTGGTTTGGATACAGCACCCCCTGGGGATACT 7006 Query 3100 TTGACTACAACCGATTCCACTGCCACTTCTCCCCCCGAGACTGGCAACGACTCATCAACA 3159 |||||| |||||||||||||||||||||| | |||||||||||||| | ||||||||| Sbjct 7005 TTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACTCATCAA-- 6948 Query 3160 ACAACTGGGGCATCCGACCCAAAGCGATGCGCTTTAGACTCTTTAACATCCAGGTTAAAG 3219 ||||| || || ||||||| ||||| ||| | |||| |||||||| | || | Sbjct 6947 -CAACTATGGATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAACATCCAAGCCAAGG 6889 Query 3220 AAGTCACTGTCCAAGACTCCAACACCACCATCGCCAACAACCTCACCAGCACGGTCCAAG 3279 | ||||| || ||| ||| ||||||||||| |||||||||||| |||| | | Sbjct 6888 AGGTCACGACGCAGGACAGTGTCACAACCATCGCCAATAACCTCACCAGCTCGGTGCCGG 6829 Query 3280 TCTTTGCGGACAAGGACTACCAGCTGCCGTACGTCCTCGG-ATCGGCTACAGAGGGCACC 3338 |||||| ||||| |||||| | || || ||||| || || | || ||| ||||||| Sbjct 6828 TCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGCGCACA-AGGGCACG 6770 Query 3339 TTCCCGCCGTTCCCAGCGGATATCTACACGATCCCGCAGTATGGTTACTGCACGCTAAAC 3398 | || || ||||| || || || | | | |||||||| || ||| ||| || ||| Sbjct 6769 CTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCTACCTCACACTCAAC 6710 Query 3399 TACAACAACGAGGCGGTGGATCGTTCGGCCTTCTACTGTCTAGACTATTTCCCCTCAGAC 3458 ||| |||| || | || |||||||||||| | || || ||||| | Sbjct 6709 GACAGCAACAGCGCCATCCGGCGGGGGGCCTTCTACTGCTTTGAGTACTTCCCGAGCCAG 6650 Query 3459 ATGCTGCGGACAGGAAATAACTTTGAATTCACTTACACGTTCGAGGACGTTCCTTTCCA- 3517 ||||| |||| || || |||||||| ||| ||| ||| |||||||| || ||||| Sbjct 6649 ATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACGAGTTTGAGGACGTGCCCTTCCAC 6590 Query 3518 --TAGCATGTTTGCTCACAACCAGACGCTAGACCGGCTGATGAATCCTCTCGTCGATCAG 3575 ||| | || ||| || ||| | || || |||||||||||| | || ||| Sbjct 6589 TCGAGC-TACATG--CACTCTCAATTGCTCTATCGACTCATGAATCCTCTCATGGACCAG 6533 Query 3576 TACCTGTGG 3584 ||||||||| Sbjct 6532 TACCTGTGG 6524 Score = 102 bits (112), Expect = 2e-18 Identities = 197/288 (68%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 2409 GGTCTCGTGTTCCCGGGTTACAAGTATCTAGGCCCTTTCAACGGTCTAGATAAAGGAAAA 2468 ||||| || | | ||| || ||||| || || || |||||||| || |||||||| | Sbjct 7723 GGTCTTGTCCTTCTGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAG 7664 Query 2469 CCCGTCAAC-GAGGCAGACGCTGCCGCCTTAGAGCACGACAAGGCTTACGACCTCGAACT 2527 ||||| ||| ||| || |||| | | || |||||||| |||||||| | | || Sbjct 7663 CCCGTGAACAGAGCCA-ACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCT 7605 Query 2528 CAAGGACGGGCACAACCCGTACTTTGAGTACAACGAGGCCGATAGACGTTTCCAGGAACG 2587 || ||| |||| || || | ||||||| | || || ||||| || Sbjct 7604 TGAGAGCGGAGACAATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAA 7545 Query 2588 TCTCAAAGACGATACCTCTTTCGGAGGGAATCTCGGTAAAGCCATCTTTCAGGCCAAAAA 2647 ||| |||| || || |||||||||| ||||| ||||| ||||||||||||| || Sbjct 7544 GCTCCAAGAAGACTCCAGCTTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAA 7485 Query 2648 GAGGGTCCTCGAGCCCTTTGGTCTGATTGAACAACCCGACAACACGGC 2695 ||||| ||||| || |||| | || | || | || | || ||||| Sbjct 7484 AAGGGTTCTCGAACCTTTTGATTTGGTCGAGAAGCCTGTTAAGACGGC 7437 >seq137177 Length=6214 Score = 113 bits (124), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 2946 GATTCCCAATGGCTGGACAACGGAGTCGTTACCCGAACCACTCGAACCTGGGTCCTGCCC 3005 ||||||| ||| || || ||||| | ||| |||||| ||||| |||| |||||| Sbjct 211 GATTCCCTTTGGATGCACGGTCGAGTCCTCACCAGAACCAACGGAACCCGGGTGCTGCCC 152 Query 3006 AGCTACAACAACCACTTGTACAAGCGGATCCAAGGACCGGGAGGAAC--CGACCCCAACA 3063 ||||||||| ||||| |||||||| ||| | ||||| | | | | ||| Sbjct 151 AGCTACAACCACCACCTGTACAAGGCCATCGAC--ACCGGCAACTCCATCAATGAGCACA 94 Query 3064 ATAAATTCTTTGGATTCAGCACCCCCTGGGGGTACTTTGACTACAACCGATTCCACTGCC 3123 | || | || ||| |||||| ||||| || ||| ||||| |||||||| ||||||| Sbjct 93 ACAAGTGGTTCAGATACAGCACACCCTGAGGACACTGTGACTTCAACCGATGTCACTGCC 34 Query 3124 ACTTCTCCCCCCGAGACTGGCAACGACTCATCA 3156 |||| || || ||| |||||| |||||||||| Sbjct 33 ACTTTTCACCAAGAGGCTGGCAGCGACTCATCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14839030333560