Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq87054 495 1e-136 seq77957 77.0 9e-11 >seq87054 Length=8607 Score = 495 bits (548), Expect = 1e-136 Identities = 554/742 (75%), Gaps = 30/742 (4%) Strand=Plus/Minus Query 2636 TGGCTGCGGGTGGTGGCGGACCAGTGGGCGACGATGCACAAGGTGCCGATGGAGTGGGTA 2695 ||||| | || ||||||| ||| ||||| || || |||||||||||||||| | |||| Sbjct 7230 TGGCTTCAGGCGGTGGCGCGCCAATGGGCAACAATCAACAAGGTGCCGATGGAATCGGTA 7171 Query 2696 ATGCCTCAGGAAATTGGCATTACGATTCCGTTTGGATGGACGGCGCTGTCATCACCAAGT 2755 || |||| ||||||||||||| ||||||| |||||||||||| | || ||||| Sbjct 7170 ATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCACCCGAA 7111 Query 2756 CCACCCGAACCTGGAGCCTGCCCGCCTACAACAACCACCTCTACCGCCAGATCCAGTCCA 2815 ||||| |||||||| || ||| |||||||||||| ||||| |||| | || Sbjct 7110 CCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATCAACGCC- 7052 Query 2816 GCGGCACCGGAGACGGCACGTACTTTGGTTACAGCACGCCTTGGGGATACTTCGATTTCA 2875 |||| || | || | || ||||| |||||||| || ||||||||||| || |||| Sbjct 7051 --GGCAACGAAAAC---AAGTGGTTTGGATACAGCACCCCCTGGGGATACTTTGACTTCA 6997 Query 2876 ATCGATTCCACTGCCACTTTTCTCCCAGGGACTGGCAGCGGCTCATCAACAACCACTGGG 2935 | ||||||||||||||||| | ||| | |||||||||| |||||||||||| | | Sbjct 6996 ACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACTCATCAACAACTAT---G 6940 Query 2936 GCATCCGCCCCAAGCGGCTCCACTTTAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGA 2995 | || | |||||| || | ||||| ||||||| ||||||||| | |||||||||||||| Sbjct 6939 GATTCAGACCCAAGTGGATGCACTTCAAGCTCTCCAACATCCAAGCCAAGGAGGTCACGA 6880 Query 2996 CGACCGACGGCACCACGACCATCGCCAACAACCTCACCAGCACCATACAGGTCTTTGCGG 3055 || ||| | ||| ||||||||||| |||||||||||| | | | |||||||| || Sbjct 6879 CGCAGGACAGTGTCACAACCATCGCCAATAACCTCACCAGCTCGGTGCCGGTCTTTGTGG 6820 Query 3056 ACACGGAGTACCAGCTCCCGTACGTGCTCGGCAACGCCCACGAGGGCTGCCTGCCGCCGT 3115 ||||||| || | || || |||||||| |||||||| ||| ||||| ||||| || | Sbjct 6819 ACACGGACTATAATCTACCCTACGTGCTAGGCAACGCGCACAAGGGCACGCTGCCACCCT 6760 Query 3116 TCCCGGCGGACGTCTTCATGCTGCCGCAGTACGCGTACCTGACGCTCAACGCCAACCCCA 3175 ||||||| ||| | || ||| |||||||||| ||||| || ||||||| || Sbjct 6759 TCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCTACCTCACACTCAACGACA------ 6706 Query 3176 CGAACCAGGGCGCGGCCGCGCTCAGCCTGCCGCAGAGCGCCTTCTACTGCCTGGAGTACT 3235 | | ||| || | | | || | | |||||||||||| | ||||||| Sbjct 6705 -GCAACAGCGC--------------CATCCGGCGGGGGGCCTTCTACTGCTTTGAGTACT 6661 Query 3236 TTCCGAGCCAGATGCTGAGGACCGGGAACAACTTCTCGTTCAGCTACGAGTTCGAGAAGC 3295 | |||||||||||||| |||||||| |||||||| |||| ||||||||| ||| | Sbjct 6660 TCCCGAGCCAGATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACGAGTTTGAGGACG 6601 Query 3296 TGCCCTTCCACTCGATGTTCATGCACAGCCAGAGCCTGGACCGGCTCATGAACCCGCTCA 3355 ||||||||||||||| | ||||||| || || | || |||||||| || |||| Sbjct 6600 TGCCCTTCCACTCGAGCTACATGCACTCTCAATTGCTCTATCGACTCATGAATCCTCTCA 6541 Query 3356 TCGACCAGTACCTCTGGTACCT 3377 | ||||||||||| |||| ||| Sbjct 6540 TGGACCAGTACCTGTGGTTCCT 6519 Score = 192 bits (212), Expect = 2e-45 Identities = 306/437 (70%), Gaps = 8/437 (2%) Strand=Plus/Minus Query 2018 GACGACGTCAATAAAGAGCAATAAAATGATTTACAGCAGTCATGTCGTTTGTCGATCACC 2077 ||||| |||||||||||| |||| ||| | || ||||||||||||||| ||||||| Sbjct 7888 GACGATTGCAATAAAGAGCAGTAAA-TGAGTCG-AGTAGTCATGTCGTTTGTTGATCACC 7831 Query 2078 CCCCAGACTGGCTCGAGGAGATCGGAGAGGGGCTCTCCGAGTTCATCGGACTAGAGGCGG 2137 | ||||| || ||| || || || || | || | ||||||| |||| || | | | Sbjct 7830 CTCCAGATTGCCTCAAGAAGCTCAGATACGGTCCAGCCGAGTTTATCGACCTCAAACCCG 7771 Query 2138 GACCGCCGAAGCCTAAGCCGGGCTACCAG------GACCGCGCGCGCGGCCTCGTCGTCC 2191 | | ||| ||||| | || | ||| ||| | | || || || ||| | | Sbjct 7770 GCCGGCCAAAGCCGAGAGCGAATCAGCAGAAGCAAGACTCCTCACGTGGTCTTGTCCTTC 7711 Query 2192 CCGGCTACAAGTACCTCGGGCCCTTCAACGGACTCGACAGGGGCGAGCCCGTCAACGCGG 2251 || || ||||||||||| ||||||||||| || || | ||| ||||||| ||| | Sbjct 7710 TGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGGCCAGCCCGTGAACAGAG 7651 Query 2252 CCGACGCGGCGGCCAAGAAGCACGACGAGGAGTACGACCGGCTCCTCAAGGCGGGGGACA 2311 || |||| | ||||| ||||||| |||| ||| | ||||| || || || |||| Sbjct 7650 CCAACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCTGCTTGAGAGCGGAGACA 7591 Query 2312 ACCCGTACCTCGCCTACAACCACGCGGACGCCGAGTTCCAGAAGGACCTCAGCGGCGACT 2371 | || || ||| ||||| ||||||||||| |||||||| || | ||| | |||| Sbjct 7590 ATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGAGAAGCTCCAAGAAGACT 7531 Query 2372 CCAGCCTAGCCGGCAACGCCGCGAACGCGCTCTTCCAGGCCAAGAAGAGGGTCCTCGAGC 2431 ||||| | | || | | || || || |||| ||||||||||| ||||| ||||| | Sbjct 7530 CCAGCTTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCAAGAAAAGGGTTCTCGAAC 7471 Query 2432 CCTTCGGACTGGTCGAG 2448 | || | |||||||| Sbjct 7470 CTTTTGATTTGGTCGAG 7454 >seq77957 Length=1537 Score = 77.0 bits (84), Expect = 9e-11 Identities = 107/150 (71%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 3833 GCATGGTCTGGCAGGACCGCGACATCTACCTGCAGGGCCCGATATGGGCCAAGATCCCGG 3892 |||||||||||||| || ||||| ||| | | || | | | |||||||| | ||| | Sbjct 67 GCATGGTCTGGCAGAGTCGGGACATGTACTTCAACGGGCAGGTCTGGGCCAACACCCCAG 126 Query 3893 AGACGGACGGCCACTTCCACCCGTCCCCGCTCATGGGCGGCTTCGGGCTCAAGAACCCGC 3952 | || || ||| || ||| || | ||||| || || || ||||| || | || |||| Sbjct 127 ACACCGAAGGCAGCTCCCATCCACCGCCGCTGATTGGAGGGTTCGGACTGAGAAAACCGC 186 Query 3953 CGCCGCAGATCCTCGTCAAGAACACGCCCG 3982 | || ||| ||| |||| | |||||||| Sbjct 187 CTCCTCAGGCACTCATCAAAACCACGCCCG 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13574503539480