Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq87054 300 5e-78 >seq87054 Length=8607 Score = 300 bits (332), Expect = 5e-78 Identities = 476/674 (71%), Gaps = 34/674 (5%) Strand=Plus/Minus Query 2664 AATGGCTCAAGGAGGTGGCGGACCAATGGCAGACGATAACCAAGGCGCCGAGGGAGTGGG 2723 ||||||| ||| ||||||| ||||||| || || | ||||| ||||| ||| | || Sbjct 7232 AATGGCTTCAGGCGGTGGCGCGCCAATGGGCAACAATCAACAAGGTGCCGATGGAATCGG 7173 Query 2724 TAATGCCTCGGGAGATTGGCATTGCGATACCCAATGGCTGGGCGACCACGTCATTACAAA 2783 |||| |||||||| |||||||||||||| ||| ||| ||| ||||| || | || Sbjct 7172 TAATTCCTCGGGAAATTGGCATTGCGATTCCCTTTGGATGGACGACCGAGTGCTCACCCG 7113 Query 2784 ATCTACCAGAACTTGGGTTCTGCCCTCTTACGGGAATCATCTCTACTCGCCCATCAACTT 2843 | | |||||||| ||||| || ||| ||| || |||||||| | | |||||| Sbjct 7112 AACCACCAGAACCTGGGTGCTCCCCAGCTACAACAACCATCTCTATAAGGCGATCAACG- 7054 Query 2844 TGATGGAACCACAGGGAACGGAACCCAAGCCGCTTACTGCGGATACGCTACCCCCTGGGC 2903 | || |||| || | ||| | || |||||| |||||||||| Sbjct 7053 -----------CCGGCAACGAAAAC-AAGTGGTTT-----GGATACAGCACCCCCTGGGG 7011 Query 2904 CTACTTTGACTTTAACCGATTCCACTGCCACTTTTCCCCCCGAGACTGGCAAAGACTCAT 2963 ||||||||||| |||||||||||||||||||| | |||||||||||||| |||||| Sbjct 7010 ATACTTTGACTTCAACCGATTCCACTGCCACTTCCCGCCCCGAGACTGGCAGCAACTCAT 6951 Query 2964 TAACAACCATACCGGAATACGACC--AGTCGGACTCAAATTCAAGCTGTTCAACATCCAG 3021 |||||| || ||| | |||| ||| ||| || |||||||| | ||||||||| Sbjct 6950 CAACAACTAT---GGATTCAGACCCAAGT-GGATGCAC-TTCAAGCTCTCCAACATCCAA 6896 Query 3022 GTCAAGGAAATCACAGTACAAGATTCGACCAAAACGATCGCCAACAATCTCACCAGCACC 3081 | |||||| |||| || || || ||| |||||||| || ||||||||| | Sbjct 6895 GCCAAGGAGGTCACGACGCAGGACAGTGTCACAACCATCGCCAATAACCTCACCAGCTCG 6836 Query 3082 GTACAGGTCTTTGCGGACACGGAGCACCAGCTCCCGTACGTATTAGGAAATGC-CACGCA 3140 || | |||||||| ||||||||| | | || || ||||| |||| || || ||| | Sbjct 6835 GTGCCGGTCTTTGTGGACACGGACTATAATCTACCCTACGTGCTAGGCAACGCGCACA-A 6777 Query 3141 GGGCACGTTTCCTCCCTTTCCGGCTGAAGTCTTTCAGTTGCCTCAGTACGGCTACTGTAC 3200 ||||||| | || ||||| ||||| || | |||||| | || |||||||||||| || Sbjct 6776 GGGCACGCTGCCACCCTTCCCGGCAGACATGTTTCAGCTACCGCAGTACGGCTACCTCAC 6717 Query 3201 CATCCAAGGC--CCTCAGGGTAAGTTTACCGACAGAAGTGCCTTCTACTGCTTGGAGTAC 3258 || | | | | ||| | | ||| | | | |||||||||||||| |||||| Sbjct 6716 ACTCAACGACAGCAACAGCGCCA----TCCGGC-GGGGGGCCTTCTACTGCTTTGAGTAC 6662 Query 3259 TTTCCTTCCAAGATGCTGAGAACGGGGAATAACTTTGAATTTACTTACAAGTTCGAGAAG 3318 || || | ||||||| || || || || |||||||| || ||| |||| ||| | Sbjct 6661 TTCCCGAGCCAGATGCTCAGGACCGGCAACAACTTTGAGTTCGTCTACGAGTTTGAGGAC 6602 Query 3319 GTTCCCTTCCATTC 3332 || |||||||| || Sbjct 6601 GTGCCCTTCCACTC 6588 Score = 111 bits (122), Expect = 5e-21 Identities = 194/280 (69%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 2211 ACGCGGTCTAGTGGTTCCAGGTTATAAATACCTCGGTCCATTCAACGGATTAGACAAGGG 2270 ||| ||||| || ||| || ||||| |||||||| || |||||||| | || || || Sbjct 7727 ACGTGGTCTTGTCCTTCTGGGGTATAAGTACCTCGGACCCTTCAACGGCCTTGATAAAGG 7668 Query 2271 CGAGCCTGTCAACGCAGCTGACGCGGCTGCCCTTGAACACGACAAAGCTTATAACGAGCT 2330 | |||| || ||| ||| |||| | || || ||||| | ||||| || ||| Sbjct 7667 CCAGCCCGTGAACAGAGCCAACGCCGTCACCAAGGAGCACGATGAGGCTTACAATCGGCT 7608 Query 2331 TCTCGAGGCTGGAGACAACCCGTACATCAAGTACAACCACGCGGACGCCGTCTTTCAAGA 2390 || ||| |||||||| || || |||||||||| ||||||||||| | || ||||| Sbjct 7607 GCTTGAGAGCGGAGACAATCCATATCTCAAGTACAATCACGCGGACGCGGAGTTCCAAGA 7548 Query 2391 -ACGCTTGCAAGGAGATACTAGTTTGGGTGGTAACGCGGCTAACGCGGTTTTTCAATTCA 2449 | || | |||| ||| | || || || || | | | || || || ||||| || Sbjct 7547 GAAGC-TCCAAGAAGACTCCAGCTTCGGAGGGACCCTCGGAAAAGCAGTCTTTCAGGCCA 7489 Query 2450 AGAAGCGGTTGCTCGAGCCGTTTGGAGCGGTCGAGCAGCC 2489 |||| || | ||||| || |||| ||||||| |||| Sbjct 7488 AGAAAAGGGTTCTCGAACCTTTTGATTTGGTCGAGAAGCC 7449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14545251381400