Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq18467 277 5e-71 >seq18467 Length=3096793 Score = 277 bits (306), Expect = 5e-71 Identities = 407/572 (71%), Gaps = 22/572 (4%) Strand=Plus/Plus Query 2792 CCACAAGTTTGGGATCTAATACAATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATA 2851 || ||| ||||||||||| |||||||||| |||| |||||| ||||||| |||||| Sbjct 748840 CCTCAAATTTGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATA 748899 Query 2852 ACGAGGGTGCCGATGGAGTGGGTAATTCCTCAGGAAATTGGCATTGCGATTCCCAATGGC 2911 ||||| ||||||||||||| | |||||| ||||||||||||||||||||| |||| Sbjct 748900 TGCAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGG 748959 Query 2912 TGGGCGACAGAGTCATCACCACCAGCACCAGAACCTGGGCCCTGCCCACTTACAACAACC 2971 | || |||||||||||||| | ||| | |||||||||||||| || |||||||||| Sbjct 748960 TTGGTGACAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTGCCAACCTACAACAACC 749019 Query 2972 ATCTCTACAAGCAAATCTCCAGCCAATCAGGAG---CTTCAAA---CGACAACCACTACT 3025 | || |||||| |||| || | | || |||| || ||| ||||||||| |||| Sbjct 749020 ACCTGTACAAGAAAAT---CAACAACTCTGGAGCGACTGGAAACAGCGACAACCAGTACT 749076 Query 3026 TTGGCTACAGCACCCCTTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCAC 3085 | | ||||| || ||||| || || ||||| | | ||||| ||||||| || | Sbjct 749077 ACAGATTCAGCATCCTGTGGGGATACTTGGACTTCAGTCGGTTCCATGGCCACTTTTCCC 749136 Query 3086 CACGTGACTGGCAGCGACTCATTAACAACAACTGGGGATTCCGGCCCAAGAAACTCAGCT 3145 | |||||||| | ||||| || | |||||||||| || || | || || Sbjct 749137 TTCAAGACTGGCAACATCTCATCAATAGCAACTGGGGA------CCAAAAAGGCTTGACT 749190 Query 3146 TCAAGCTCTTCAACATCCAAGTTAGAGGGGTCACGCAGAACGATGGCACGACGACTATTG 3205 | ||||| |||||||| ||||| | || |||| | || ||| || || || Sbjct 749191 TGAAGCTTTTCAACATTCAAGTCAAAGAAGTCA--TAACAC-ATGACAACAC----ATCA 749243 Query 3206 CCAATAACCTTACCAGCACGGTTCAAGTGTTTACGGACTCGGAGTATCAGCTCCCGTACG 3265 | ||||| || || ||||| | || ||||| ||||||| || | |||||| | ||| | Sbjct 749244 CTAATAATCTCACAAGCACAATCCAGGTGTTGGCGGACTCAGACTGTCAGCTACGGTATG 749303 Query 3266 TGCTCGGGTCGGCGCACCAAGGCTGTCTCCCGCCGTTTCCAGCGGACGTCTTCATGGTCC 3325 ||| || ||| |||| || || | ||||||||| | | ||||||| | Sbjct 749304 CAGCGGGGAATGCACACGAAGGAACGCTGCCTCTGTTTCCAGCAGGTCTATTCATGGCTC 749363 Query 3326 CTCAGTATGGATACCTCACCCTGAACAACGGA 3357 ||| ||||||| || || || |||||| || Sbjct 749364 TACAGCATGGATATCTAACTCTCAACAACAGA 749395 Score = 203 bits (224), Expect = 1e-48 Identities = 545/822 (66%), Gaps = 16/822 (2%) Strand=Plus/Plus Query 1023 ATCACGTCAGAAAAGCAATGGATTCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCC 1082 ||||| |||||||| |||||||| || ||| ||||| || || | || ||| || Sbjct 747117 ATCACCTCAGAAAAACAATGGATACAAGAGAGCCAGGAATCTTATCTGAGCTACAATGCA 747176 Query 1083 GCCTCCAACTCGCGGTCCCAGATCAAGGCCGCGCTGGACAATGCCTCCAAGATCATGAGC 1142 | | || || |||||| || | || |||| ||||| | ||||| | || Sbjct 747177 ACTGGAATATCCAGGAGCCAGATTAAATCTGCTTTGGAGAATGCATGTAAGATGACGAAT 747236 Query 1143 CTGACAAAGACGGCTCCGGACTACCTGGTGGGCAGCAACCCGCCGGAGGACATTACCAAA 1202 ||||||| || | || || ||| || | | | ||| | ||||||| | Sbjct 747237 CTGACAACAACCAGT---GATTATTTGGCCGGTAATGAACTGCCAAATGACATTAAGACC 747293 Query 1203 AATCGGATCTACCAAATCCTGGAGCTGAACGGGTACGATCC-GCAGTACGCGGCCTCCGT 1261 ||| |||| ||| |||| | || || || || || ||||| ||| || || | || Sbjct 747294 AATTGGATATACAAAATGTTTGAACTAAATGGATATGATCCTGCA-TATGCTGGAAGGGT 747352 Query 1262 CTTCCTGGGCTGGGCGCAAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCC 1321 | |||||| ||||| ||||| || || || ||||| |||||| | ||||| || Sbjct 747353 GCTGTATGGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGGGTGTTTGGTCC 747412 Query 1322 G---GCCACGACGGGTAAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTA 1378 || || | || || || ||||| || ||||||||| | | | || | || || Sbjct 747413 TAATGCAACTGCCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTTGTTCTGTTTTA 747472 Query 1379 CGGCTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGT 1438 || || || | ||| ||||||| |||||||| ||||| || ||| || |||||||| | Sbjct 747473 TGGATGTGTTTATTGGGCCAATGAAAACTTTCCATTCAATGACTGCATCAACAAGATGAT 747532 Query 1439 GATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGAGCGCCAAGGCCATTCT 1498 ||||||||||| || || || ||||| |||||||| || || || ||||||||||| Sbjct 747533 CATCTGGTGGGAAGAAGGAAAAATGACTGCCAAGGTTGT-CAGTCTGCAAAGGCCATTCT 747591 Query 1499 GGGCGGAAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGAACCCAC 1558 | ||||| || | | |||| |||| ||||||| || |||| || | || Sbjct 747592 CGATGGAAGTCCTGTTTGTATAGACC-AAAGGGCAAGTCCTCTCAACAGACTGATCTGAC 747650 Query 1559 TCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCAC 1618 || || | || || || || || ||||| | | || || || || || | || Sbjct 747651 ACCAGTAACTGTGACTTCAAATACTGACATGGGTGTTGTCATGGATGGAAATTCAATAAC 747710 Query 1619 CTTCGAGCATCAGCAGCCGCTGCAGGACCGGATGTTTGAATTTGAACTTACCCGCCGTTT 1678 ||||| ||||| ||||| || | || | || || ||||||||||| || ||| | Sbjct 747711 ATTCGAACATCAACAGCCATTGGAAGATCAAATATTCAAATTTGAACTTGCCTGCCAACT 747770 Query 1679 GGACCATGACTTTGGGAAGGTCACCAAACAGGAAGTAAAGGACTTTTTCCGGTGGGCTTC 1738 || ||||||||| ||||| |||| ||| || | || || || || ||||| Sbjct 747771 CGATCATGACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAA 747830 Query 1739 CGATCACGTGA--CTGACGTGGCTCATGAGTTCTACGTCAGAAAGGGTGGA-GCTAAGAA 1795 | | |||| ||| || | | |||||| | || | |||||||||| |||||||| Sbjct 747831 GG--CCAGTGAGTGTGATGTCACGCGTGAGTTTAATGTTA-AAAGGGTGGAGGCTAAGAA 747887 Query 1796 ACGCCCCGCCTCCAATGACGCGGATGTAAGCGAGCCAAAACG 1837 | | ||||| | || | | || ||||| ||||||||| Sbjct 747888 AAGATCCGCCCCTTCTGCAGAGAATATAAGCCTGCCAAAACG 747929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14994491056735