Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq18467 241 4e-60 >seq18467 Length=3096793 Score = 241 bits (266), Expect = 4e-60 Identities = 434/624 (70%), Gaps = 13/624 (2%) Strand=Plus/Plus Query 1208 GACATTAAAACCAACCGCATCTACCGCATCCTGGAGCTGAACGGCTACGAACCTGCCTAC 1267 |||||||| ||||| | || ||| || | || || || || || || ||||| || Sbjct 747282 GACATTAAGACCAATTGGATATACAAAATGTTTGAACTAAATGGATATGATCCTGCATAT 747341 Query 1268 GCCGGCTCCGT-CTTTCTCGGCTGGGCCCAGAAAAGGTTCGGGAAGCGCAACACCATCTG 1326 || || || || | | |||||| || |||| ||| || || | ||||| ||||| Sbjct 747342 GCTGGAAGGGTGCTGTAT-GGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTG 747400 Query 1327 GCTGTTTGGGCCG---GCCACCACGGGCAAGACCAACATCGCGGAAGCCATCGCCCACGC 1383 | ||||||| || || || | || ||||| ||||| || ||||||||| | | | Sbjct 747401 GGTGTTTGGTCCTAATGCAACTGCCGGAAAGACAAACATTGCAGAAGCCATCTCATATGT 747460 Query 1384 CGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAATGATTGCGT 1443 || | || || || || || | ||| ||||||| |||||||| |||||||| ||| | Sbjct 747461 TGTTCTGTTTTATGGATGTGTTTATTGGGCCAATGAAAACTTTCCATTCAATGACTGCAT 747520 Query 1444 CGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGC 1503 | |||||||| | ||||||||||| || || || ||||| |||||||| || |||| || Sbjct 747521 CAACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGACTGCCAAGGTTGT-CAGTCTGC 747579 Query 1504 CAAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCA 1563 ||||||||||||| || || || | | |||| |||| ||||||| || || Sbjct 747580 AAAGGCCATTCTCGATGGAAGTCCTGTTTGTATAGACC-AAAGGGCAAGTCCTCTCAACA 747638 Query 1564 GATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGG 1623 || || | || || || | || || || || || ||||| | | || || || || Sbjct 747639 GACTGATCTGACACCAGTAACTGTGACTTCAAATACTGACATGGGTGTTGTCATGGATGG 747698 Query 1624 GAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGACCGGATGTTCAAATTTGAACT 1683 || | || ||||| || || ||||| ||| | || | || |||||||||||||| Sbjct 747699 AAATTCAATAACATTCGAACATCAACAGCCATTGGAAGATCAAATATTCAAATTTGAACT 747758 Query 1684 CACCCGCCGTCTGGAGCATGACTTTGGCAAGGTGACAAAGCAGGAAGTCAAAGAGTTCTT 1743 || ||| || || ||||||||| | ||| | ||||| || ||||||||||||| Sbjct 747759 TGCCTGCCAACTCGATCATGACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTT 747818 Query 1744 CCGCTGGGCGCAGGATCACGTGA--CCGAGGTGGCGCATGAGTTCTACGTCAGAAAGGGT 1801 |||||| ||| | |||| || || ||| |||||| | || | ||||||| Sbjct 747819 TGCCTGGGCAAAGG--CCAGTGAGTGTGATGTCACGCGTGAGTTTAATGTTA-AAAGGGT 747875 Query 1802 GGA-GCCAACAAAAGACCCGCCCC 1824 ||| || || |||||| ||||||| Sbjct 747876 GGAGGCTAAGAAAAGATCCGCCCC 747899 Score = 226 bits (250), Expect = 9e-56 Identities = 326/467 (70%), Gaps = 15/467 (3%) Strand=Plus/Plus Query 2815 TGGGACCTACTACAATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGCG 2874 ||||| ||| |||||||||| |||| |||||| ||||||| |||||| | || Sbjct 748849 TGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATATGCAGGGTT 748908 Query 2875 CCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACA 2934 |||| |||||||| | | |||| ||||||||||||||||||||||||||| | || |||| Sbjct 748909 CCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGGTTGGTGACA 748968 Query 2935 GAGTCATCACCANNNNNNNNNNNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACA 2994 |||||||||| | |||| |||||||| |||||||| |||| Sbjct 748969 GAGTCATCACAAAATCTACCGGTACCTGGGCCCTGCCAACCTACAACAACCACCTGTACA 749028 Query 2995 AGCAAATCTCCAGTGCTTCAACGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCA 3054 || ||||| || || | || | | || ||||||||| |||| | | | ||||| Sbjct 749029 AGAAAATCAACAACTCTGGAGCGACTGGAAACAGCGACAACCAGTACTACAGATTCAGCA 749088 Query 3055 CCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGC 3114 || ||||| || || || |||| | ||||| |||||||||| | | ||||||| Sbjct 749089 TCCTGTGGGGATACTTGGACTTCAGTCGGTTCCATGGCCACTTTTCCCTTCAAGACTGGC 749148 Query 3115 AGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCA 3174 | | |||||||| | ||| |||||| || || || || |||| || || |||| Sbjct 749149 AACATCTCATCAATAGCAACTGGGGA------CCAAAAAGGCTTGACTTGAAGCTTTTCA 749202 Query 3175 ACATCCAAGTCAAGGAGGTCACGACGAATGATGGCGTCACAAC-CATCGCTAATAACCTT 3233 |||| |||||||| || |||| || ||| ||||| |||| ||||||| || Sbjct 749203 ACATTCAAGTCAAAGAAGTCATAACACATG--------ACAACACATCACTAATAATCTC 749254 Query 3234 ACCAGCACGGTTCAAGTCTTCTCGGACTCGGAGTACCAGCTTCCGTA 3280 || ||||| | || || || ||||||| || | ||||| | ||| Sbjct 749255 ACAAGCACAATCCAGGTGTTGGCGGACTCAGACTGTCAGCTACGGTA 749301 Score = 122 bits (134), Expect = 3e-24 Identities = 186/264 (70%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 4065 CAGGGTCCCATTTGGGCCAAAATTCCTCACACAGATGGACACTTTCACCCGTCTCCTCTT 4124 ||||| || ||| || | |||| |||||||||||||||||| ||||| || || || || Sbjct 750335 CAGGGACCGATTGGGTCTAAAAATCCTCACACAGATGGACATTTTCATCCCTCACCGCTG 750394 Query 4125 ATGGGCGGCTTTGGACTCAAGAACCCGCCTCCTCAGATCCTCATCAAAAACACGCCTGTT 4184 | || || |||||| || | || || ||||| || || || ||||| || | ||| Sbjct 750395 ACGGATGGATTTGGATGGAAATATCC-CCGCCTCAAATTCTAATGAAAAATACTCTGGTT 750453 Query 4185 CCTGCGAATCCTCCGGCGGAGTTTTCAGCTACAAAGTTTGCTTCATTCATCACCCAATAC 4244 ||||| | |||||| | ||| | | | ||| | | |||| | || || Sbjct 750454 CCTGCAAGTCCTCCAACAACGTTCACCACCAGCAAGACCAACCCGTGCATCTCTCAGTAT 750513 Query 4245 TCCACAGGACAAGTGAGTGTGGAAATTGAATGGGAGCTGCAGAAAGAAAACAGCAAGCGC 4304 |||||||||||||||| || ||||| ||||||||||| || ||||| || | | Sbjct 750514 TCCACAGGACAAGTGACGGTTGAAATCGAATGGGAGCTTCAAAAAGAGTCATCCACGAGA 750573 Query 4305 TGGAATCCCGAAGTGCAGTACACA 4328 ||| ||| |||||||||| |||| Sbjct 750574 TGGGGTCCAGAAGTGCAGTCCACA 750597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14968919552055