Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq18467 149 2e-32 >seq18467 Length=3096793 Score = 149 bits (164), Expect = 2e-32 Identities = 255/364 (70%), Gaps = 17/364 (5%) Strand=Plus/Plus Query 3068 ATGGGCGAC--TCTGCAGGGGGTGCCGATGGAGTGGGTAATGCCTCAGGAAATTGGCATT 3125 |||||| || | ||||||| | ||||||||||||| | | |||| ||||||||||||| Sbjct 748887 ATGGGCCACAATATGCAGGG--TTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATT 748944 Query 3126 GCGATTCCCAATGGCTGGGAGACACAGTCATTACCAAGACTACAAGAACCTGGGTCCTGC 3185 |||||||| |||| | || |||| |||||| || || |||| | ||||||| ||||| Sbjct 748945 GCGATTCCACATGGGTTGGTGACAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTGC 749004 Query 3186 CAAGCTACAACAACCACATGTACCAAGCCATC-ACAA--GCGGAACAAACCCAGACTCAA 3242 ||| ||||||||||||| ||||| | ||| |||| ||| | | | || Sbjct 749005 CAACCTACAACAACCACCTGTACAAGAAAATCAACAACTCTGGAGCGACTGGAAACAGCG 749064 Query 3243 ATACCCAATATGCTGGATACAGCACCCCCTGGGGGTACTTTGATTTCAACAGATTCCACT 3302 | | ||| || ||| ||||| || ||||| ||||| || |||| | ||||| Sbjct 749065 ACAACCAGTACTACAGATTCAGCATCCTGTGGGGATACTTGGACTTCAGTCGGTTCCATG 749124 Query 3303 GCCA--TTTCTCTCCAAGAGACTGGCAGAGACTCATCAACAACCATTGGGGGATTAGACC 3360 |||| |||| || || ||||||||| |||||||| | | | |||| |||| Sbjct 749125 GCCACTTTTCCCTTCA--AGACTGGCAACATCTCATCAATAGCAACTGGG------GACC 749176 Query 3361 GAAAGCACTCAAATTCAAGATATTCAATGTGCAAGTTAAAGAAGTCACGACGCAAGACCA 3420 ||| || | || ||| | ||||| | ||||| |||||||||| || || ||| | Sbjct 749177 AAAAAGGCTTGACTTGAAGCTTTTCAACATTCAAGTCAAAGAAGTCATAACACATGACAA 749236 Query 3421 GACA 3424 ||| Sbjct 749237 CACA 749240 Score = 105 bits (116), Expect = 2e-19 Identities = 195/280 (70%), Gaps = 7/280 (3%) Strand=Plus/Plus Query 1427 GACATTACTAAAAATCGGATCTATCAAAT-TCTGAAGTTGAATAACTATAACCCTCAATA 1485 ||||||| | ||| |||| || |||| | |||| | ||| ||| | ||| ||| Sbjct 747282 GACATTAAGACCAATTGGATATACAAAATGTTTGAACTA-AATGGATATGATCCTGCATA 747340 Query 1486 TGTAGGGAGCGTCCTATGCGGATGG-GTGAAAAGAGAATTCAACAAAAGAAATGCCATAT 1544 || || || || || | || ||| || |||| | || | |||||||| | || | Sbjct 747341 TGCTGGAAGGGTGCTGTATGGCTGGTGTCAAAAAAAGTTTGGA-AAAAGAAACACTATCT 747399 Query 1545 GGCTCTACGGACCT---GCGACCACCGGAAAGACCAACATAGCCGAGGCTATTGCCCATG 1601 || | | || ||| || || |||||||||| ||||| || || || || | ||| Sbjct 747400 GGGTGTTTGGTCCTAATGCAACTGCCGGAAAGACAAACATTGCAGAAGCCATCTCATATG 747459 Query 1602 CTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGCG 1661 ||| | || ||||| |||||| | ||| | ||||| ||||| ||||| ||||||||| Sbjct 747460 TTGTTCTGTTTTATGGATGTGTTTATTGGGCCAATGAAAACTTTCCATTCAATGACTGCA 747519 Query 1662 TTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGAC 1701 | | || ||| | || |||||||| || ||||||||||| Sbjct 747520 TCAACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGAC 747559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16292244919245