Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq18467 149 2e-32 >seq18467 Length=3096793 Score = 149 bits (164), Expect = 2e-32 Identities = 230/322 (71%), Gaps = 11/322 (3%) Strand=Plus/Plus Query 3794 CCAGGTATGGTGTGGTC---TAATAGAG-ACATTTACTTACAGGGGCCTATTTGGGCTAA 3849 || || |||||||||| | || || ||| || ||| ||||| || ||| || |||| Sbjct 750295 CCGGGAATGGTGTGGTGAGATCATGAAGTACACTTCCTTCCAGGGACCGATTGGGTCTAA 750354 Query 3850 AATTCCAAATACAGATGGACATTTTCATCCTTCTCCCAGAATGGGTGGTTTTGGATTAAA 3909 || ||| | |||||||||||||||||||| || || | || ||| ||||||| || Sbjct 750355 AAATCCTCACACAGATGGACATTTTCATCCCTCACCGCTGACGGATGGATTTGGATGGAA 750414 Query 3910 ACATCCTCCGCCTATGATTCTGATCAAAAATACACCAGTTCCTGCTGATCCTCCAACTAC 3969 | |||| |||||| ||||| || |||||||| | |||||||| ||||||||| || Sbjct 750415 ATATCC-CCGCCTCAAATTCTAATGAAAAATACTCTGGTTCCTGCAAGTCCTCCAACAAC 750473 Query 3970 CTTCAATCCAATGCCACAGACTA---GTTTCATTACTGAATACAGTACAGGACAAGTAAC 4026 |||| ||| || |||| | | ||| || | || ||||||||||| || Sbjct 750474 GTTCA--CCACCAGCA-AGACCAACCCGTGCATCTCTCAGTATTCCACAGGACAAGTGAC 750530 Query 4027 TGTTGAAATGTTGTGGGAGGTACAGAAAGAATCCTCCAAAAGATGGAATCCAGAAGTACA 4086 |||||||| |||||| | || ||||| || |||| |||||| ||||||||| || Sbjct 750531 GGTTGAAATCGAATGGGAGCTTCAAAAAGAGTCATCCACGAGATGGGGTCCAGAAGTGCA 750590 Query 4087 GTTTACTTCCAATTTTGGAACT 4108 || || | || ||||| ||| Sbjct 750591 GTCCACAGCAAACTTTGGCACT 750612 Score = 122 bits (134), Expect = 2e-24 Identities = 294/436 (67%), Gaps = 18/436 (4%) Strand=Plus/Plus Query 2600 ATGGCTACAGGAGGAGGCGGTCCGATGGCAGACGATAACCAGGGCGCCGAGGGAGTGGGT 2659 |||||| |||| || ||| | || |||| || ||| ||||| |||| |||||||| Sbjct 748863 ATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATATGCAGGGTTCCGATGGAGTGGGC 748922 Query 2660 AATTCCTCAGGTGATTGGCATTGCGATACCAAGTGGATGGGAGACCACGTCATTACAAAG 2719 | |||||| || |||||||||||||| ||| ||| | || ||| ||||| ||||| Sbjct 748923 ACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGGTTGGTGACAGAGTCATCACAAAA 748982 Query 2720 TCAACCAGAACTTGGGTGCTCCCCACTTACGGGAATCATCTCTACGGGCCTATCAACTTT 2779 || ||| | || |||| || || || ||| || || || ||| | |||||| Sbjct 748983 TCTACCGGTACCTGGGCCCTGCCAACCTACAACAACCACCTGTACAAGAAAATCAACAAC 749042 Query 2780 GACGGCACCACAGGTTCGGGTGCTAATGCAGCCTA-TGCAGGATACAAGACTCCCTGGGG 2838 || | || || | | || ||| || | || ||| || | | ||||| Sbjct 749043 TCTGGAGCGACTGGAAACAGCGACAA-CCAG--TACTACA-GATTCAGCATCCTGTGGGG 749098 Query 2839 GTACTTTGACTTCAATCGATTCCATTGCCACTTCTCCCCCCGAGACTGGCAAAGACTCAT 2898 ||||| ||||||| ||| |||||| ||||||| |||| | |||||||||| ||||| Sbjct 749099 ATACTTGGACTTCAGTCGGTTCCATGGCCACTTTTCCCTTCAAGACTGGCAACATCTCAT 749158 Query 2899 CAACAACCACACAGGCATCAGGCCGAAAGGACTCAAAATCAAAGTCTTTAACGTCCAAGT 2958 ||| | | || || | || ||| | || | | || | || ||| | ||||| Sbjct 749159 CAATAGC--AACTGG----GGACCAAAAAGGCTTGACTTGAAGCTTTTCAACATTCAAGT 749212 Query 2959 CAAAGAAGTTACAACACAAGATTCAACGAAAACAATTGCCAACAATCTCACCAGCACCGT 3018 ||||||||| | |||||| || |||| || || | || |||||||| ||||| | Sbjct 749213 CAAAGAAGTCATAACACATGA--CAAC----AC-ATCACTAATAATCTCACAAGCACAAT 749265 Query 3019 ACAGATCTTTGCGGAC 3034 ||| | || |||||| Sbjct 749266 CCAGGTGTTGGCGGAC 749281 Score = 95.1 bits (104), Expect = 3e-16 Identities = 139/193 (72%), Gaps = 13/193 (7%) Strand=Plus/Plus Query 1269 AAGAACTTTGGCAAGAGAAACACCATCTGGCTGTATGGTCCA---GCTACTACCGGCAAA 1325 || || ||||| || |||||||| |||||| ||| |||||| || ||| |||| || Sbjct 747372 AAAAAGTTTGGAAAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCAACTGCCGGAAAG 747431 Query 1326 ACCATCATCGCTCAAGCTATTGCACATGCTGTTAAACTGTTTGCTGG---TGTTAATTGG 1382 || | ||| || |||| || || ||| |||| |||||| ||| |||| ||||| Sbjct 747432 ACAAACATTGCAGAAGCCATCTCATATGTTGTT---CTGTTTTATGGATGTGTTTATTGG 747488 Query 1383 ACTAATGAAAACTTTCCCTTCTGTAACTG--TCCAGGGAAACTGCTTATCTGGTGGGAGG 1440 | |||||||||||||| ||| | |||| || | || || | ||||||||||| | Sbjct 747489 GCCAATGAAAACTTTCCATTCAATGACTGCATCAA--CAAGATGATCATCTGGTGGGAAG 747546 Query 1441 AGGGCAAGATGAC 1453 | || || ||||| Sbjct 747547 AAGGAAAAATGAC 747559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14054738259745