Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq18467 237 5e-59 >seq18467 Length=3096793 Score = 237 bits (262), Expect = 5e-59 Identities = 255/335 (76%), Gaps = 2/335 (1%) Strand=Plus/Plus Query 2760 CCTCAAGTTTGGGAGCTGATACAATGTCTGCGGGAGGTGGCGGCCCATTGGGCGACAATA 2819 |||||| ||||||| || ||||||| |||| || |||||| ||||| ||||| |||||| Sbjct 748840 CCTCAAATTTGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATA 748899 Query 2820 ACCAAGGTGCCGATGGAGTGGGCAATGCCTCGGGAGATTGGCATTGCGATTCCACGTGGA 2879 || ||| ||||||||||||||| | |||||||| ||||||||||||||||||| ||| Sbjct 748900 TGCAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGG 748959 Query 2880 TGGGGGACAGAGTCGTCACCAAGTCCACCCGAACCTGGGTGCTGCCCAGCTACAACAACC 2939 | || ||||||||| |||| || || ||| | ||||||| ||||| | ||||||||||| Sbjct 748960 TTGGTGACAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTGCCAACCTACAACAACC 749019 Query 2940 ACCAGTACCGAGAGATCAAAAGCGGCTCCGTCGAC-GGAAGCAACGCCAACGCCTACTTT 2998 ||| |||| | ||||| | | || |||| |||| || || |||| |||| Sbjct 749020 ACCTGTACAAGAAAATCAACAAC-TCTGGAGCGACTGGAAACAGCGACAACCAGTACTAC 749078 Query 2999 GGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCACTGGAGCCCC 3058 ||| ||||| || ||||| ||||| ||||| | || ||||| |||||| || Sbjct 749079 AGATTCAGCATCCTGTGGGGATACTTGGACTTCAGTCGGTTCCATGGCCACTTTTCCCTT 749138 Query 3059 CGAGACTGGCAAAGACTCATCAACAACTACTGGGG 3093 | |||||||||| |||||||| | | ||||||| Sbjct 749139 CAAGACTGGCAACATCTCATCAATAGCAACTGGGG 749173 Score = 172 bits (190), Expect = 2e-39 Identities = 383/568 (67%), Gaps = 15/568 (3%) Strand=Plus/Plus Query 1245 AAATTTTTGAGATGAATGGCTACGACCCGGCCTACGCGGGATCCATCCTCTACGGCTGGT 1304 |||| ||||| | ||||| || || || || || || ||| | || || ||||||| Sbjct 747307 AAATGTTTGAACTAAATGGATATGATCCTGCATATGCTGGAAGGGTGCTGTATGGCTGGT 747366 Query 1305 GTCAGCGCTCCTTCAACAAGAGGAACACCGTCTGGCTCTACGGACCC---GCCACGACCG 1361 |||| || || || ||||| ||||| | | || || || || ||| Sbjct 747367 GTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCAACTGCCG 747426 Query 1362 GCAAGACCAACATCGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACT 1421 | ||||| ||||| || || |||||| | | ||| | ||||| || || || | | Sbjct 747427 GAAAGACAAACATTGCAGAAGCCATCTCATATGTTGTTCTGTTTTATGGATGTGTTTATT 747486 Query 1422 GGACCAATGAAAACTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGG 1481 || |||||||||||||||| || |||||||| | |||| ||| |||| |||||||| | Sbjct 747487 GGGCCAATGAAAACTTTCCATTCAATGACTGCATCAACAAGATGATCATCTGGTGGGAAG 747546 Query 1482 AGGGAAAGATGACCAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAG- 1540 | ||||| ||||| |||||| | | | || || |||||||| || | || ||| Sbjct 747547 AAGGAAAAATGACTGCCAAGGTTG-TCAGTCTGCAAAGGCCATTCTCGATGG----AAGT 747601 Query 1541 ---GTGCGGGTCGATCAGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATT 1597 || | | || || || | || |||||| || | |||| || || || | | Sbjct 747602 CCTGTTTGTATAGACCA-AAGGGCAAGTCCTCTCAACAGACTGATCTGACACCAGTAACT 747660 Query 1598 GTAACTTCCAATACAAACATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACAC 1657 || ||||| ||||| ||||| |||| || ||||||| ||||| | || || ||||| Sbjct 747661 GTGACTTCAAATACTGACATGGGTGTTGTCATGGATGGAAATTCAATAACATTCGAACAT 747720 Query 1658 CAGCAGCCGCTGGAGGACCGCATGTTCAAATTTGAACTGACTAAGCGGCTCCCGCCAGAT 1717 || ||||| |||| || | || |||||||||||||| | | ||| | || Sbjct 747721 CAACAGCCATTGGAAGATCAAATATTCAAATTTGAACTTGCCTGCCAACTCGATCATGAC 747780 Query 1718 TTTGGCAAGATTACTAAGCAGGAAGTCAAGGACTTTTTTGCTTGGGCAAAGGTCAATCAG 1777 ||| | ||||| || || || |||| || || ||||| |||||||||| || | || Sbjct 747781 TTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGGCCAGTGAG 747840 Query 1778 -GTGCCGGTGACTCACGAGTTTAAAGTT 1804 ||| || || | |||||||| ||| Sbjct 747841 TGTG-ATGTCACGCGTGAGTTTAATGTT 747867 Score = 170 bits (188), Expect = 6e-39 Identities = 284/407 (70%), Gaps = 4/407 (1%) Strand=Plus/Plus Query 2200 AGTAGTCATGTCTTTTGTTGATCACCCTCCAGATTGGTTGGAAGAAGTTGGTGAAGGTCT 2259 ||||||||||||| |||||| ||| ||||||| ||||||| || | ||||| | || Sbjct 748269 AGTAGTCATGTCTCTTGTTGCTCATCCTCCAGCTTGGTTGAAAAAGGTTGGCTGTGCACT 748328 Query 2260 TCGCGAGTTTTTGGGCCTTGAAGCGGGCCCACCGAAACCAAAACCCAATCAGCAGCATCA 2319 | |||||||| ||||| || | || || || |||||| | ||||| || |||| Sbjct 748329 TGCTGAGTTTTTTTATCTTGAGGCAAGACCTCCAAAGCCAAAAGCTAATCAACA-AATCA 748387 Query 2320 AGATCAAGCCCGTGGTCTTGTGCTGCCTGGTTATAACTATCTCGGACCCGGAAACGGTCT 2379 ||| | || | || | ||| | ||||| || || ||| | ||| | || ||||| Sbjct 748388 AGACAACACCAGAGGGCCTGTTGTTCCTGGATACAAATATTTTGGATCACTTAATGGTCT 748447 Query 2380 CGATCGAGGAGAGCCTGTCAACAGGGCAGACGAGGTCGCGCGAGAGCACGACATCTCGTA 2439 | | |||||||| || ||||| ||||| ||| || |||||| |||| | || Sbjct 748448 AGGTAAAGGAGAGCTAGTTAACAGAACAGACACGGTTGCCAAAGAGCATGACAAGGCATA 748507 Query 2440 CAACGAGCAGCTTGAGGCGGGAGACAACCCCTACCTCAAGTACAACCACGCGGACGCCGA 2499 || | | ||| | || || | || | || | |||||||||||||| || || Sbjct 748508 TAATCAACTCCTTAATAGTGGTGATTATCCACATCTAACATACAACCACGCGGATGCTGA 748567 Query 2500 GTTTCAGGAGAAGCTCGCCGACGACACATCCTTCGGGGGAAACCTCGG-AAAGGCAGTCT 2558 ||||||| ||||||| || |||| ||||| | || |||||||| || ||| | || | Sbjct 748568 GTTTCAGAAGAAGCTTGCTGACG--ACATCGCTAGGTGGAAACCTTGGAAAAAGTTGTTT 748625 Query 2559 TTCAGGCCAAGAAAAGGGTTCTCGAACCTTTTGGCCTGGTTGAAGAG 2605 | |||||||| ||| ||||| |||||| | || ||||| ||| || Sbjct 748626 TCCAGGCCAAAAAACAGGTTCCCGAACCCTGTGCGCTGGTAGAAAAG 748672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14725990257595