Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq18467 212 2e-51 >seq18467 Length=3096793 Score = 212 bits (234), Expect = 2e-51 Identities = 335/476 (70%), Gaps = 18/476 (4%) Strand=Plus/Plus Query 2839 CCTCTAGTGTGGGATCATCTGTCATGGCTGAAGGAGGTGGCGGTCCAATGGGCGATGCAG 2898 |||| | | ||||||| | ||||||| ||| |||||| | ||||||||| | Sbjct 748840 CCTCAAATTTGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATA 748899 Query 2899 GCCAAGGTGCCGACGGAGTGGGCAATTCCTCGGGAAATTGGCATTGCGATTCCCAATGGC 2958 || ||| |||| |||||||||| |||||||||||||||||||||||||||| |||| Sbjct 748900 TGCAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGG 748959 Query 2959 TGGACAACGGAGTCGTTACCCGAACCACTCGAACCTGGGTCCTGCCCAGCTACAACAACC 3018 | | || ||||| | || | | || | ||||||| |||||| | ||||||||||| Sbjct 748960 TTGGTGACAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTGCCAACCTACAACAACC 749019 Query 3019 ACTTGTACAAGCGGATCCAAGGAC-CGGGAGGAACCG---ACCCCAACAATAAATTCTTT 3074 || |||||||| || ||| || | |||| || | || | |||| | | || Sbjct 749020 ACCTGTACAAGAAAAT-CAACAACTCTGGAGCGACTGGAAACAGCGACAACCAGTACTAC 749078 Query 3075 GGATTCAGCACCCCCTGGGGGTACTTTGACTACAACCGATTCCACTGCCACTTCTCCCCC 3134 ||||||||| || ||||| ||||| |||| || || ||||| ||||||| |||| Sbjct 749079 AGATTCAGCATCCTGTGGGGATACTTGGACTTCAGTCGGTTCCATGGCCACTTTTCCCTT 749138 Query 3135 CGAGACTGGCAACGACTCATCAACAACAACTGGGGCATCCGACCCAAAGCGATGCGCTTT 3194 | ||||||||||| |||||||| | |||||||| |||| ||| | | ||| Sbjct 749139 CAAGACTGGCAACATCTCATCAATAGCAACTGGG------GACCAAAAAGGCTTGACTTG 749192 Query 3195 AGACTCTTTAACATCCAGGTTAAAGAAGTCACTGTCCAAGACTCCAACACCACCATCGCC 3254 | || || ||||| || || |||||||||| || || ||||| |||| | Sbjct 749193 AAGCTTTTCAACATTCAAGTCAAAGAAGTCATAACACATGA---CAACA----CATCACT 749245 Query 3255 AACAACCTCACCAGCACGGTCCAAGTCTTTGCGGACAAGGACTACCAGCTGCCGTA 3310 || || ||||| ||||| |||| || || |||||| |||| ||||| | ||| Sbjct 749246 AATAATCTCACAAGCACAATCCAGGTGTTGGCGGACTCAGACTGTCAGCTACGGTA 749301 Score = 149 bits (164), Expect = 2e-32 Identities = 263/380 (69%), Gaps = 5/380 (1%) Strand=Plus/Plus Query 1195 GGGTGGTGCCAGAAGAAATGGGGCAAGCGAAACACGCTGTGGCTGTTCGGACCT---GCG 1251 || ||||| || || || | || || ||||||| | ||| |||| || ||| || Sbjct 747360 GGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCA 747419 Query 1252 ACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCTATGGATGC 1311 || |||| ||||| ||||| || || || || | ||| ||| | ||| |||||||| Sbjct 747420 ACTGCCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTTGTTCTGTTTTATGGATGT 747479 Query 1312 GTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATGATTATCTGG 1371 ||| | ||| |||| || |||||||| ||||| |||||| || | |||||||| |||||| Sbjct 747480 GTTTATTGGGCCAATGAAAACTTTCCATTCAATGACTGCATCAACAAGATGATCATCTGG 747539 Query 1372 TGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATTCTGGGAGGA 1431 |||||||| || |||||||| |||||||| || | | || || || ||||| | ||| Sbjct 747540 TGGGAAGAAGGAAAAATGACTGCCAAGGTTGT-CAGTCTGCAAAGGCCATTCTCGATGGA 747598 Query 1432 TCTCGGGTGAGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCGACGCCGGTC 1491 || || | | |||| ||| |||| | || | || || | ||| || || Sbjct 747599 AGTCCTGTTTGTATAGACC-AAAGGGCAAGTCCTCTCAACAGACTGATCTGACACCAGTA 747657 Query 1492 ATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACTACGTTCGAG 1551 | | | || || || ||||| || |||||| || || || | | || ||||| Sbjct 747658 ACTGTGACTTCAAATACTGACATGGGTGTTGTCATGGATGGAAATTCAATAACATTCGAA 747717 Query 1552 CATAAGCAGCCGTTGGAGGA 1571 ||| | ||||| ||||| || Sbjct 747718 CATCAACAGCCATTGGAAGA 747737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14853847780995