Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq18467 199 1e-47 >seq18467 Length=3096793 Score = 199 bits (220), Expect = 1e-47 Identities = 352/509 (69%), Gaps = 22/509 (4%) Strand=Plus/Plus Query 2636 TGGCTGCGGGTGGTGGCGGACCAGTGGGCGACGATGCACAAGGTGCCGATGGAGTGGGTA 2695 ||||||| ||||||||| | ||| ||||| || || || ||| ||||||||||||| | Sbjct 748864 TGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATATGCAGGGTTCCGATGGAGTGGGCA 748923 Query 2696 ATGCCTCAGGAAATTGGCATTACGATTCCGTTTGGATGGACGGCGCTGTCATCACCAAGT 2755 | |||| ||||||||||||| ||||||| ||| | | | | |||||||| || | Sbjct 748924 CTTCCTCGGGAAATTGGCATTGCGATTCCACATGGGTTGGTGACAGAGTCATCACAAAAT 748983 Query 2756 CCACCCGAACCTGGAGCCTGCCCGCCTACAACAACCACCTCTACCGCCAGAT---CCAGT 2812 | ||| | |||||| |||||| |||||||||||||||| ||| | || | | | Sbjct 748984 CTACCGGTACCTGGGCCCTGCCAACCTACAACAACCACCTGTACAAGAAAATCAACAACT 749043 Query 2813 CCAGCGGCACCGGAGACGGC-AC-----GTACTTTGGTTACAGCACGCCTTGGGGATACT 2866 | | | || ||| || || || ||||| | | ||||| | |||||||||| Sbjct 749044 CTGGAGCGACTGGAAACAGCGACAACCAGTACTACAGATTCAGCATCCTGTGGGGATACT 749103 Query 2867 TCGATTTCAATCGATTCCACTGCCACTTTTCTCCCAGGGACTGGCAGCGGCTCATCAACA 2926 | || |||| ||| ||||| |||||||||| | |||||||| | |||||||| | Sbjct 749104 TGGACTTCAGTCGGTTCCATGGCCACTTTTCCCTTCAAGACTGGCAACATCTCATCAATA 749163 Query 2927 ACCACTGGGGCATCCGCCCCAAGCGGCTCCACTTTAAGCTCTTCAACATCCAGGTCAAGG 2986 | |||||| | || || |||| |||| ||||| |||||||| || ||||| | Sbjct 749164 GCAACTGGG------GACCAAAAAGGCTTGACTTGAAGCTTTTCAACATTCAAGTCAAAG 749217 Query 2987 AGGTCACGACGACCGACGGCACCACGACCATCGCCAACAACCTCACCAGCACCATACAGG 3046 | |||| || || | | || || |||| | || || ||||| ||||| || |||| Sbjct 749218 AAGTCATAAC-AC--ATGACAACA----CATCACTAATAATCTCACAAGCACAATCCAGG 749270 Query 3047 TCTTTGCGGACACGGAGTACCAGCTCCCGTACGTGCTCGGCAACGCCCACGAGGGCTGCC 3106 | || |||||| | || | ||||| | ||| | || || || ||||| || | Sbjct 749271 TGTTGGCGGACTCAGACTGTCAGCTACGGTATGCAGCGGGGAATGCACACGAAGGAACGC 749330 Query 3107 TGCCGCCGTTCCCGGCGGACGTCTTCATG 3135 |||| | ||| || || | | |||||| Sbjct 749331 TGCCTCTGTTTCCAGCAGGTCTATTCATG 749359 Score = 107 bits (118), Expect = 5e-20 Identities = 219/322 (68%), Gaps = 5/322 (2%) Strand=Plus/Plus Query 1091 AACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGCACCGGCTTC 1150 || || || || || || || || || || |||||| |||||||| | | || Sbjct 747321 AATGGATATGATCCTGCATATGCTGGAAGGGTGCTGTATGGCTGGTGTCAAAAAAAGTTT 747380 Query 1151 GGCAAGCGCAACACCGTCTGGCTCTTCGGGCCG---GCCACGACCGGCAAGACGAACCTC 1207 || || | ||||| ||||| | || || || || || |||| ||||| ||| | Sbjct 747381 GGAAAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCAACTGCCGGAAAGACAAACATT 747440 Query 1208 GCCGAGGCCATCAGCCACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAACGAGAAC 1267 || || |||||| | || | || || || || || | ||| |||| || ||| Sbjct 747441 GCAGAAGCCATCTCATATGTTGTTCTGTTTTATGGATGTGTTTATTGGGCCAATGAAAAC 747500 Query 1268 TTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAGATGACG 1327 || || ||||| |||||| | |||||||||||||||||||||| || || || ||||| Sbjct 747501 TTTCCATTCAATGACTGCATCAACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGACT 747560 Query 1328 TCCAAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTCGACCAG 1387 ||||||| ||| || || |||||||| |||| || || || | | ||||| Sbjct 747561 GCCAAGGTTGTC-AGTCTGCAAAGGCCATTCTCGATGGAAGTCCTGTTTGTATAGACCA- 747618 Query 1388 AAGTGCAAGAACTCGCAGCAGA 1409 ||| ||||| ||| || |||| Sbjct 747619 AAGGGCAAGTCCTCTCAACAGA 747640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13588058299335