Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq546 302 1e-78 >seq546 Length=548233 Score = 302 bits (334), Expect = 1e-78 Identities = 503/715 (70%), Gaps = 14/715 (2%) Strand=Plus/Minus Query 1103 CCAAATCAAGGCTGCCTTGGACAATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCC 1162 ||| || || |||| ||||| ||||| | ||||| ||||| ||||| |||| || Sbjct 469076 CCAGATTAAATCTGCTTTGGAGAATGCATGTAAGATCATGAGTCTGAC--AAACAACCAG 469019 Query 1163 CGACTACCTGGTGGGCCAGCAGCCCGTGGAGGACATTTCCAGCAATCGGATTTATAAAAT 1222 || || ||| || | | | | |||||| | ||||||||| || ||||| Sbjct 469018 TGATTATTTGGCCGGTAATGAACTGCCAAATGACATTAAGACCAATCGGATATACAAAAT 468959 Query 1223 TTTGGAACTAAACGGGTACGATCCCCAATATGCGGCTTCCGTCTTTCTGGGATGG-GCCA 1281 || |||||||| || || ||||| |||||| | | | || ||| | || Sbjct 468958 GTTTGAACTAAATGGATATGATCCTGCATATGCTGGAAGGGCGCTGGATGGCTGGTGTCA 468899 Query 1282 CGAAAAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCT---GCAACTACCGGGA 1338 |||||||| || || || ||||| |||||| ||||||| ||| ||||||||||| | Sbjct 468898 A-AAAAAGTTTGGAAAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCAACTACCGGAA 468840 Query 1339 AGACCAACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGA 1398 |||| ||||| || || ||||| | | ||| | || || || || || || |||| Sbjct 468839 AGACAAACATTGCAGAAGCCATCTCATATGTTGTTCTGTTTTATGGATGTGTTAATTGGA 468780 Query 1399 CCAATGAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGG 1458 ||||||| |||||||| ||||| || | || |||||||| | ||||||||||| || | Sbjct 468779 CCAATGAAAACTTTCCATTCAATGATTACATCAACAAGATGATCATCTGGTGGGAAGAAG 468720 Query 1459 GGAAGATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGC 1518 | || ||||| |||||||| || |||| || | |||||||||| ||||| || Sbjct 468719 GAAAAATGACGGCCAAGGTTGTC-AGTCTGCAGAGGCCATTCTCGATGGAAGTCCTGTTT 468661 Query 1519 GCGTGGACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCT 1578 | | ||||| || ||||||||||| |||| || | ||| || |||| || || | Sbjct 468660 GTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGACTGTGACTT 468601 Query 1579 CCAACACCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGC 1638 | || || |||||||| | || || || || || |||| || |||||||| || |||| Sbjct 468600 CAAATACTAACATGTGTGTTGTCATGGATGGAAATTCAATAACATTCGAACATCAACAGC 468541 Query 1639 CGTTGCAAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGA 1698 | ||| | || | || |||||||||||||| || ||| || |||||||||||| ||| Sbjct 468540 CTTTGGAGGATCAAATATTCAAATTTGAACTTGCCTGCCAACTTGATCATGACTTTAGGA 468481 Query 1699 AGGTCACCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCAAAGGATCACGTG-GT-TGA 1756 || |||| || || ||||||| || || |||||||||| | ||| || ||| Sbjct 468480 AGATCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAAGG--CCAGTGAGTGTGA 468423 Query 1757 GGTGGAGCATGAATTCTACGTCAAAAAGGGTGGA-GCCAAGAAAAGACCCGCCCC 1810 || || || || | || ||||||||||| || ||||||||| ||||||| Sbjct 468422 TGTCACGCGGGAGTTTGATGT-TAAAAGGGTGGAGGCTAAGAAAAGATCCGCCCC 468369 Score = 275 bits (304), Expect = 2e-70 Identities = 399/560 (71%), Gaps = 24/560 (4%) Strand=Plus/Minus Query 2795 TGGGAACTAATACGATGGCTACAGGCAGTGGCGCACCAATGGCAGACAATAACGAGGGCG 2854 ||||| ||| ||| |||||| |||| ||||| ||||||| ||||| |||| Sbjct 467409 TGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATGTGCAGGGTT 467350 Query 2855 CCGACGGAGTGGGTAATTCCTCGGGAAATTGGCATTGCGATTCCACATGGATGGGCGACA 2914 |||| |||||||| | |||||||||||||||||||||||||||||||||| |||| | || Sbjct 467349 CCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGGTGGGTGTCA 467290 Query 2915 GAGTCATCACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACA 2974 |||||||||| | ||| | |||||||||||| ||| ||||||||||||||| | || Sbjct 467289 GAGTCATCACAAAATCTACCGGTACCTGGGCCCTG-CCAACTACAACAACCACCTGTTCA 467231 Query 2975 AACAAATTTCCAGCCAATCAGGAGC--CTCG----AACGACAATCACTACTTTGGCTACA 3028 | |||| || | | || ||||| || | || ||||| || |||| || | | Sbjct 467230 AGAAAAT---CAACAACTCTGGAGCAACTGGAAACAATGACAACCAGTACTACGGATTCG 467174 Query 3029 GCACCCCTTGGGGGTATTTTGACTTCAACAGATTCCACTGCCACTTTTCACCACGTGACT 3088 ||| || ||||| || || |||||||| | || || |||||||||| | | |||| Sbjct 467173 GCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCCACTTTTCCCTTCAAGACT 467115 Query 3089 GGCAAAGACTCATCAACAACAACTGGGGATTCCGACCCAAGAGACTCAACTTCAAGCTCT 3148 ||||| |||||||| | | |||||| |||| || || || |||| ||||| | Sbjct 467114 GGCAACATCTCATCAATAGCCACTGGG------GACCAAAAAGGCTTGACTTGAAGCTTT 467061 Query 3149 TTAACATTCAAGTCAAAGAGGTCACGCAGAATGACGGTACGACGACGATTGCCAATAACC 3208 | ||||||||||||| ||| |||| ||||| || || | ||||| | Sbjct 467060 TCAACATTCAAGTCAGAGAAGTCATAACACATGACAACAC-------ATCACTAATAATC 467008 Query 3209 TTACCAGCACGGTTCAGGTGTTTACTGACTCGGAGTACCAGCTCCCGTACGTCCTCGGCT 3268 | || ||||| | |||||||| | ||||| || || ||||| | ||| | || Sbjct 467007 TCACAAGCACAATCCAGGTGTTGGCGGACTCAGACTATCAGCTACGGTATGCAGCGGGGA 466948 Query 3269 CGGCGCATCAAGGATGCCTCCCGCCGTTCCCAGCAGACGTCTTCATGGTGCCACAGTATG 3328 || || ||||| || || ||||| ||||||| || ||||||| |||||| ||| Sbjct 466947 ATGCACACGAAGGAACGCTGCCTCCGTTTCCAGCAGGTGTATTCATGGCTCCACAGCATG 466888 Query 3329 GATACCTCACCCTGAACAAC 3348 |||| || || || |||||| Sbjct 466887 GATATCTAACTCTCAACAAC 466868 Score = 114 bits (126), Expect = 4e-22 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 4038 CCTTC-AGGGGCCCATCTGGGCAAAGATTCCACACACGGACGGACATTTTCACCCCTCTC 4096 ||||| |||| || || ||| | || | ||| ||||| || ||||||||||| ||||| | Sbjct 465934 CCTTCCAGGGACCGATTTGGTCTAAAAGTCCTCACACAGATGGACATTTTCATCCCTCGC 465875 Query 4097 CCCTCATGGGTGGATTCGGACTTAAACACCCTCCTCCACAGATTCTCATCAAGAACACCC 4156 | || | ||||||||| ||||| ||||| || || | || ||||| || || || || | Sbjct 465874 CACTGACGGGTGGATTTGGACTGAAACATCC-CCGTCTCAAATTCTAATGAAAAATACTC 465816 Query 4157 CGGTACCTGCGAATCCTTCGACCACCTTCAGTGCGGCAAAGTTTGCTTCCTTCATCACAC 4216 |||| ||||| |||||| | || || ||| | ||| | | |||| | | Sbjct 465815 CGGTTCCTGCAAATCCTCCAACAACGTTCGCCACCAGCAAGACCAACCCGTGCATCTCTC 465756 Query 4217 AGTACTCCACGGGACAGGTCAGCGTGGAGATCGAGTGGGAGCTGCAGAAGGA 4268 |||| ||||| ||||| || | || || ||||| |||||||| || || || Sbjct 465755 AGTATTCCACAGGACAAGTGACGGTTGAAATCGAATGGGAGCTTCAAAAAGA 465704 Score = 98.7 bits (108), Expect = 3e-17 Identities = 215/314 (68%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 2320 GACGACAGCAGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAACGGACTC 2379 ||| ||| ||| || | ||| ||||||| ||||| || | ||| | || || || || Sbjct 467879 GACAACACCAGAGGGCCTGTTGTTCCTGGATACAAATATTTTGGATCATTTAATGGTCTA 467820 Query 2380 GACAAGGGAGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACGACAAAGCCTAC 2439 | || ||||||| || ||| |||||| | | ||| ||||||||||| || || Sbjct 467819 GGTAAAGGAGAGCTAGTTAACAGAGCAGACACGGTTGCCAAAGAGCACGACAAGGCATAT 467760 Query 2440 GACCGGCAGCTCGACAGCGGAGACAACCCGTACCTCAAGTACAACCACGCCGACGCGGAG 2499 | | | || ||||||| || | || | || | ||||||||||| || || ||| Sbjct 467759 AATCAACTCCTTAACAGCGGTGATTATCCACATCTAACATACAACCACGCAGATGCTGAG 467700 Query 2500 TTTCAGGAGCGCCTTAAAGAAGA-TACGTCTTTTGGGGGCAACCTCGG-ACGAGCAGTCT 2557 |||||| || || ||| || || || | || || ||||| || | || || | Sbjct 467699 TTTCAGAAGAAGCTCGCAGACGACAACATCGCTAGGTGGAAACCTTGGAAAAAGTTGTTT 467640 Query 2558 TCCAGGCGAAAAAGA-GGGTTCTTGAACCTCTGGGC-CTGGTTGAGGAACCTGTTAAGAC 2615 ||||||| ||||| | |||||| ||||| ||| || ||||| || | || || |||| Sbjct 467639 TCCAGGCCAAAAAAACGGGTTCCCGAACC-CTGTGCTCTGGTAGAAAAGCCAGTCAAGAT 467581 Query 2616 GGCTCC-GGGAAAA 2628 ||| || | ||||| Sbjct 467580 GGCACCAGTGAAAA 467567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14858905758840