Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq546 212 2e-51 >seq546 Length=548233 Score = 212 bits (234), Expect = 2e-51 Identities = 379/545 (70%), Gaps = 10/545 (2%) Strand=Plus/Minus Query 1323 GGCTGGGCGCAAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCG---GCC 1379 |||||| ||||| ||||| || || || ||||| |||||| | ||||| || || Sbjct 468909 GGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCA 468850 Query 1380 ACGACGGGTAAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGC 1439 || || || || || ||||| || ||||||||| | | | || | || || || || Sbjct 468849 ACTACCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTTGTTCTGTTTTATGGATGT 468790 Query 1440 GTGAACTGGACCAATGAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGG 1499 || || ||||||||||| |||||||| ||||| |||| | || |||||||| | |||||| Sbjct 468789 GTTAATTGGACCAATGAAAACTTTCCATTCAATGATTACATCAACAAGATGATCATCTGG 468730 Query 1500 TGGGAGGAGGGCAAGATGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGA 1559 ||||| || || || |||||||||||||| || || || ||||||| || | ||| Sbjct 468729 TGGGAAGAAGGAAAAATGACGGCCAAGGTTGT-CAGTCTGCAGAGGCCATTCTCGATGGA 468671 Query 1560 AGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTG 1619 || || | | ||||||||||||||||| || |||| || | || || ||| Sbjct 468670 AGTCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGACACCAGTG 468611 Query 1620 ATCGTCACCTCCAACACCAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAG 1679 | || || || || || |||||||| | ||||| || ||||| || | || ||||| Sbjct 468610 ACTGTGACTTCAAATACTAACATGTGTGTTGTCATGGATGGAAATTCAATAACATTCGAA 468551 Query 1680 CACCAACAACCACTCCAGGACCGGATGTTCAAGTTCGAGCTCACCAAGCGCCTGGAGCAC 1739 || ||||| || | |||| | || ||||| || || || || | || || || Sbjct 468550 CATCAACAGCCTTTGGAGGATCAAATATTCAAATTTGAACTTGCCTGCCAACTTGATCAT 468491 Query 1740 GACTTTGGCAAGGTCACCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCGTCAGATCAC 1799 |||||| | ||| |||| || || ||||||| || || ||||| || || Sbjct 468490 GACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGC-AAAGGCCA- 468433 Query 1800 GTGA--CCGAGGTGACTCACGAGTTTTACGTCAGAAAGGGTGGA-GCTAGAAAGAGGCCC 1856 |||| || || || | |||||| | || | |||||||||| |||| || || || Sbjct 468432 GTGAGTGTGATGTCACGCGGGAGTTTGATGTTA-AAAGGGTGGAGGCTAAGAAAAGATCC 468374 Query 1857 GCCCC 1861 ||||| Sbjct 468373 GCCCC 468369 Score = 118 bits (130), Expect = 3e-23 Identities = 195/274 (71%), Gaps = 18/274 (7%) Strand=Plus/Minus Query 2887 CAAGGTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTCT 2946 || ||| ||||||||||||| | | ||||||| ||||||||||||||||||| ||| | Sbjct 467356 CAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGG-GT 467298 Query 2947 GAGGGCCA-CGTCACGACCACCAGCACCAGAACCTGGGTCTTGCCCACCTACAACAACCA 3005 | | | || |||| || | ||| | ||||||| | || ||| |||||||||||| Sbjct 467297 GGGTGTCAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTG-CCAACTACAACAACCA 467239 Query 3006 CCTCTACAAG--------CGACTCGGAGAGAGCCTG----CAGT-CCAACACCTACAACG 3052 ||| | |||| | |||| | ||| ||| || | |||| ||| ||| Sbjct 467238 CCTGTTCAAGAAAATCAACAACTCTG-GAGCAACTGGAAACAATGACAACCAGTACTACG 467180 Query 3053 GATTCTCCACCCCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCAC 3112 ||||| || || ||||||||||| |||||||| || || || ||||||| || | | Sbjct 467179 GATTCGGCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCCACTTTTCCCTTC 467121 Query 3113 GTGACTGGCAGCGACTCATCAACAACAACTGGGG 3146 |||||||| | |||||||| | | ||||||| Sbjct 467120 AAGACTGGCAACATCTCATCAATAGCCACTGGGG 467087 Score = 105 bits (116), Expect = 2e-19 Identities = 215/314 (68%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 2344 CCTAAACCCAAGGCAAATCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTCCGGGT 2403 || || || || || ||||||||| || | |||||| | | || | ||| |||| || Sbjct 467908 CCAAAGCCAAAAGCTAATCAACAA-ATTAAGACAACACCAGAGGGCCTGTTGTTCCTGGA 467850 Query 2404 TACAAATACCTCGGACCCGGCAACGGACTCGACAAGGGGGAACCCGTCAACGCAGCGGAC 2463 |||||||| | ||| | || || || | || || || | || ||| ||| ||| Sbjct 467849 TACAAATATTTTGGATCATTTAATGGTCTAGGTAAAGGAGAGCTAGTTAACAGAGCAGAC 467790 Query 2464 GCGGCAGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAGGCCGGTGACAACCCC 2523 ||| ||| |||||||||||||| || | || | || || |||||| | || Sbjct 467789 ACGGTTGCCAAAGAGCACGACAAGGCATATAATCAACTCCTTAACAGCGGTGATTATCCA 467730 Query 2524 TACCTCAAGTACAACCACGCCGACGCGGAGTTCCAGCAGCGGCTTCAGGGCGAC-ACATC 2582 | || | ||||||||||| || || ||||| ||| || ||| | |||| ||||| Sbjct 467729 CATCTAACATACAACCACGCAGATGCTGAGTTTCAGAAGAAGCTCGCAGACGACAACATC 467670 Query 2583 GTTTGGGGGCAACCTCGG-CAGAGCAGTCTTCCAGGCCAAAAAGA-GGGTTCTTGAACCT 2640 | | || || ||||| || | || || |||||||||||||| | |||||| ||||| Sbjct 467669 GCTAGGTGGAAACCTTGGAAAAAGTTGTTTTCCAGGCCAAAAAAACGGGTTCCCGAACCC 467610 Query 2641 CTTGGTCTGGTTGA 2654 || |||||| || Sbjct 467609 TGTGCTCTGGTAGA 467596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15140469864520