Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq546 277 5e-71 >seq546 Length=548233 Score = 277 bits (306), Expect = 5e-71 Identities = 439/623 (70%), Gaps = 10/623 (2%) Strand=Plus/Minus Query 1208 GACATTAAAACCAACCGCATCTACCGCATCCTGGAGCTGAACGGCTACGAACCTGCCTAC 1267 |||||||| ||||| || || ||| || | || || || || || || ||||| || Sbjct 468987 GACATTAAGACCAATCGGATATACAAAATGTTTGAACTAAATGGATATGATCCTGCATAT 468928 Query 1268 GCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAAGGTTCGGGAAGCGCAACACCATCTGG 1327 || || | | |||||| || |||| ||| || || | ||||| |||||| Sbjct 468927 GCTGGAAGGGCGCTGGATGGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGG 468868 Query 1328 CTGTTTGGGCCG---GCCACCACGGGCAAGACCAACATCGCGGAAGCCATCGCCCACGCC 1384 ||||||| || || || || || ||||| ||||| || ||||||||| | | | Sbjct 468867 GTGTTTGGTCCTAATGCAACTACCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTT 468808 Query 1385 GTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAATGATTGCGTC 1444 || | || || || || || || ||||||||||| |||||||| |||||||||| | || Sbjct 468807 GTTCTGTTTTATGGATGTGTTAATTGGACCAATGAAAACTTTCCATTCAATGATTACATC 468748 Query 1445 GACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCC 1504 |||||||| | ||||||||||| || || || |||||||||||||| || |||| || Sbjct 468747 AACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGACGGCCAAGGTTGT-CAGTCTGCA 468689 Query 1505 AAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAG 1564 |||||||||||| || || || | | ||||||||||||||||| || ||| Sbjct 468688 GAGGCCATTCTCGATGGAAGTCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAG 468629 Query 1565 ATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGG 1624 | || | || || |||| || || || || || |||||||| | || || || || Sbjct 468628 ACTGATCTGACACCAGTGACTGTGACTTCAAATACTAACATGTGTGTTGTCATGGATGGA 468569 Query 1625 AACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGACCGGATGTTCAAATTTGAACTC 1684 || | || ||||| || || ||||| ||| |||| | || |||||||||||||| Sbjct 468568 AATTCAATAACATTCGAACATCAACAGCCTTTGGAGGATCAAATATTCAAATTTGAACTT 468509 Query 1685 ACCCGCCGTCTGGAGCATGACTTTGGCAAGGTGACAAAGCAGGAAGTCAAAGAGTTCTTC 1744 || ||| || || ||||||||| | ||| | ||||| || ||||||||||||| Sbjct 468508 GCCTGCCAACTTGATCATGACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTT 468449 Query 1745 CGCTGGGCGCAGGATCACGTGA--CCGAGGTGGCGCATGAGTTCTACGTCAGAAAGGGTG 1802 |||||| ||| | |||| || || ||| ||||| | || | |||||||| Sbjct 468448 GCCTGGGCAAAGG--CCAGTGAGTGTGATGTCACGCGGGAGTTTGATGTTA-AAAGGGTG 468392 Query 1803 GA-GCCAACAAAAGACCCGCCCC 1824 || || || |||||| ||||||| Sbjct 468391 GAGGCTAAGAAAAGATCCGCCCC 468369 Score = 212 bits (234), Expect = 2e-51 Identities = 381/560 (68%), Gaps = 23/560 (4%) Strand=Plus/Minus Query 2815 TGGGACCTACTACAATGGCTTCAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGCG 2874 ||||| ||| |||||||||| |||| |||||| ||||||| ||||| | || Sbjct 467409 TGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATGTGCAGGGTT 467350 Query 2875 CCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACA 2934 |||| |||||||| | | |||| ||||||||||||||||||||||||||| |||| | || Sbjct 467349 CCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGGTGGGTGTCA 467290 Query 2935 GAGTCATCACCANNNNNNNNNNNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACA 2994 |||||||||| | || ||| |||||| |||||||| | || Sbjct 467289 GAGTCATCACAAAATCTACCGGTACCTGGGCCCTG-CCAACTACAACAACCACCTGTTCA 467231 Query 2995 AGCAAATCTCCA---GTGCTTCAACGGGGGCCAGCAACGACAACCACTACTTCGGCTACA 3051 || ||||| || || |||| || | ||| |||||||| |||| ||| | | Sbjct 467230 AGAAAATCAACAACTCTGGAGCAACTGG---AAACAATGACAACCAGTACTACGGATTCG 467174 Query 3052 GCACCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTTTTCACCACGTGACT 3111 ||| || ||||| || || || ||||| | || || |||||||||| | | |||| Sbjct 467173 GCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCCACTTTTCCCTTCAAGACT 467115 Query 3112 GGCAGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCT 3171 |||| | |||||||| | | | |||||| || || || || |||| || || | Sbjct 467114 GGCAACATCTCATCAATAGCCACTGGGGA------CCAAAAAGGCTTGACTTGAAGCTTT 467061 Query 3172 TCAACATCCAAGTCAAGGAGGTCACGACGAATGATGGCGTCACAAC-CATCGCTAATAAC 3230 ||||||| ||||||| || |||| || ||| ||||| |||| ||||||| Sbjct 467060 TCAACATTCAAGTCAGAGAAGTCATAACACATG--------ACAACACATCACTAATAAT 467009 Query 3231 CTTACCAGCACGGTTCAAGTCTTCTCGGACTCGGAGTACCAGCTTCCGTACGTCCTCGGC 3290 || || ||||| | || || || ||||||| || || ||||| | ||| | || Sbjct 467008 CTCACAAGCACAATCCAGGTGTTGGCGGACTCAGACTATCAGCTACGGTATGCAGCGGGG 466949 Query 3291 TCTGCGCACCAGGGCTGCCTCCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATAC 3350 ||| ||| | || || |||||||| || || | || |||||| ||| || | Sbjct 466948 AATGCACACGAAGGAACGCTGCCTCCGTTTCCAGCAGGTGTATTCATGGCTCCACAGCAT 466889 Query 3351 GGCTACCTGACGCTCAACAA 3370 || || || || |||||||| Sbjct 466888 GGATATCTAACTCTCAACAA 466869 Score = 147 bits (162), Expect = 7e-32 Identities = 216/304 (71%), Gaps = 5/304 (2%) Strand=Plus/Minus Query 4029 CCTGGCATGGTGTGGCAAGATAGAGACGTGTACCTGC----AGGGTCCCATTTGGGCCAA 4084 || || |||||||||| |||| || || || | | |||| || |||||| | || Sbjct 465969 CCGGGAATGGTGTGGCGAGATCATGAAGTACACTTCCTTCCAGGGACCGATTTGGTCTAA 465910 Query 4085 AATTCCTCACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAA 4144 || |||||||||||||||||| ||||| || || || || | ||| || |||||||| || Sbjct 465909 AAGTCCTCACACAGATGGACATTTTCATCCCTCGCCACTGACGGGTGGATTTGGACTGAA 465850 Query 4145 GAACCCGCCTCCTCAGATCCTCATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGA 4204 | || || |||| || || || ||||| || || |||||||| |||||||| | Sbjct 465849 ACATCC-CCGTCTCAAATTCTAATGAAAAATACTCCGGTTCCTGCAAATCCTCCAACAAC 465791 Query 4205 GTTTTCAGCTACAAAGTTTGCTTCATTCATCACCCAATACTCCACAGGACAAGTGAGTGT 4264 ||| | | | ||| | | |||| | || || |||||||||||||||| || Sbjct 465790 GTTCGCCACCAGCAAGACCAACCCGTGCATCTCTCAGTATTCCACAGGACAAGTGACGGT 465731 Query 4265 GGAAATTGAATGGGAGCTGCAGAAAGAAAACAGCAAGCGCTGGAATCCCGAAGTGCAGTA 4324 ||||| ||||||||||| || ||||| || | | |||| ||| | ||||||| | Sbjct 465730 TGAAATCGAATGGGAGCTTCAAAAAGAGTCGTCCACGAGATGGAGTCCAGGAGTGCAGCA 465671 Query 4325 CACA 4328 |||| Sbjct 465670 CACA 465667 Score = 77.0 bits (84), Expect = 1e-10 Identities = 204/301 (68%), Gaps = 8/301 (3%) Strand=Plus/Minus Query 2310 CCGAAGCCCAAAGCCAACCAGCAAAAGCAGGACGACGGCCG-GGGTCTGGTGCTTCCTGG 2368 || ||||| ||||| || || |||| || || || | | ||| ||| || ||||||| Sbjct 467908 CCAAAGCCAAAAGCTAATCAACAAATTAAG-ACAACACCAGAGGGCCTGTTG-TTCCTGG 467851 Query 2369 CTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGGA 2428 ||||| || | ||| | || || || || | || || |||| || ||| || || Sbjct 467850 ATACAAATATTTTGGATCATTTAATGGTCTAGGTAAAGGAGAGCTAGTTAACAGAGCAGA 467791 Query 2429 CGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAA-AGCGGGTGACAATC 2487 | | | ||| |||||||||||||| || | || | || || ||| ||||| ||| Sbjct 467790 CACGGTTGCCAAAGAGCACGACAAGGCATATAATCAACTCCTTAACAGC-GGTGATTATC 467732 Query 2488 CGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGA-TACG 2546 | | || || |||||||| || || ||||||||| || || ||| || || Sbjct 467731 CACATCTAACATACAACCACGCAGATGCTGAGTTTCAGAAGAAGCTCGCAGACGACAACA 467672 Query 2547 TCTTTTGGGGGCAACCTCGG-GCGAGCAGTCTTCCAGGCC-AAGAAGCGGGTTCTCGAAC 2604 || | || || ||||| || || || ||||||||| || || ||||||| ||||| Sbjct 467671 TCGCTAGGTGGAAACCTTGGAAAAAGTTGTTTTCCAGGCCAAAAAAACGGGTTCCCGAAC 467612 Query 2605 C 2605 | Sbjct 467611 C 467611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14983689851130