Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq546 145 2e-31 >seq546 Length=548233 Score = 145 bits (160), Expect = 2e-31 Identities = 258/366 (70%), Gaps = 23/366 (6%) Strand=Plus/Minus Query 3068 ATGGGCGAC--TCTGCAGGGGGTGCCGATGGAGTGGGTAATGCCTCAGGAAATTGGCATT 3125 |||||| || | ||||||| | ||||||||||||| | | |||| ||||||||||||| Sbjct 467371 ATGGGCCACAATGTGCAGGG--TTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATT 467314 Query 3126 GCGATTCCCAATGGCTGGGAGACACAGTCATTACCAAGACTACAAGAACCTGGGTCCTGC 3185 |||||||| |||| |||| | || |||||| || || |||| | ||||||| ||||| Sbjct 467313 GCGATTCCACATGGGTGGGTGTCAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTGC 467254 Query 3186 CAAGCTACAACAACCACATGTACCAAGCCATC-ACAA--GCGGAACAAACCCAGACTCAA 3242 ||| ||||||||||||| ||| | | ||| |||| ||| ||| | || ||| Sbjct 467253 CAA-CTACAACAACCACCTGTTCAAGAAAATCAACAACTCTGGAGCAA--CTGGAAACAA 467197 Query 3243 --ATACCCAATATGCTGGATACAGCACCCCCTGGGGGTACTTTGATTTCAACAGATTCCA 3300 | | ||| || |||| | ||| || ||||| ||||| || ||||| | || || Sbjct 467196 TGACAACCAGTACTACGGATTCGGCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CA 467138 Query 3301 CTGCCA--TTTCTCTCCAAGAGACTGGCAGAGACTCATCAACAACCATTGGGGGATTAGA 3358 |||| |||| || || ||||||||| |||||||| | ||| |||| || Sbjct 467137 TGGCCACTTTTCCCTTCA--AGACTGGCAACATCTCATCAATAGCCACTGGG------GA 467086 Query 3359 CCGAAAGCACTCAAATTCAAGATATTCAATGTGCAAGTTAAAGAAGTCACGACGCAAGAC 3418 || ||| || | || ||| | ||||| | ||||| | |||||||| || || ||| Sbjct 467085 CCAAAAAGGCTTGACTTGAAGCTTTTCAACATTCAAGTCAGAGAAGTCATAACACATGAC 467026 Query 3419 CAGACA 3424 | ||| Sbjct 467025 AACACA 467020 Score = 114 bits (126), Expect = 4e-22 Identities = 240/356 (67%), Gaps = 4/356 (1%) Strand=Plus/Minus Query 1529 AAAAGAAATGCCATATGGCTCTACGGACCT---GCGACCACCGGAAAGACCAACATAGCC 1585 |||||||| | || ||| | | || ||| || || ||||||||||| ||||| || Sbjct 468885 AAAAGAAACACTATCTGGGTGTTTGGTCCTAATGCAACTACCGGAAAGACAAACATTGCA 468826 Query 1586 GAGGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTC 1645 || || || | ||| ||| | || ||||| |||||||| ||||| ||||| ||||| Sbjct 468825 GAAGCCATCTCATATGTTGTTCTGTTTTATGGATGTGTTAATTGGACCAATGAAAACTTT 468766 Query 1646 CCATTTAATGACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAAT 1705 ||||| ||||| | | | | || ||| | || |||||||| || ||||||||||| Sbjct 468765 CCATTCAATGATTACATCAACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGACGGCC 468706 Query 1706 AAAGTAGTGGAATCCGCAAAAGCGATACTgggggggTCTGCTGTACGAGTTGATCAAAAG 1765 || || || | || ||| | || || || | || | |||| | |||| |||||| Sbjct 468705 AAGGTTGT-CAGTCTGCAGAGGCCATTCTCGATGGAAGTCCTGTTTGTATTGACCAAAAG 468647 Query 1766 TGTAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATAATTACCAGTAATACTGATATG 1825 || ||| ||| | ||| | || || || | | || |||||| | ||| Sbjct 468646 TGCAAGTCCTCTCAACAGACTGATCTGACACCAGTGACTGTGACTTCAAATACTAACATG 468587 Query 1826 TGCATGATTGTGGATGGAAATTCTACTACAATGGAACACAGAATTCCTTTGGAGGA 1881 || | | ||||||||||||| | ||| | ||||| | ||||||||||| Sbjct 468586 TGTGTTGTCATGGATGGAAATTCAATAACATTCGAACATCAACAGCCTTTGGAGGA 468531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16308320984670