Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq546 215 2e-52 >seq546 Length=548233 Score = 215 bits (238), Expect = 2e-52 Identities = 252/335 (75%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 2760 CCTCAAGTTTGGGAGCTGATACAATGTCTGCGGGAGGTGGCGGCCCATTGGGCGACAATA 2819 |||||| ||||||| || ||||||| |||| || |||||| ||||| ||||| ||||| Sbjct 467418 CCTCAAATTTGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATG 467359 Query 2820 ACCAAGGTGCCGATGGAGTGGGCAATGCCTCGGGAGATTGGCATTGCGATTCCACGTGGA 2879 || ||| ||||||||||||||| | |||||||| ||||||||||||||||||| ||| Sbjct 467358 TGCAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGG 467299 Query 2880 TGGGGGACAGAGTCGTCACCAAGTCCACCCGAACCTGGGTGCTGCCCAGCTACAACAACC 2939 |||| | ||||||| |||| || || ||| | ||||||| ||| ||| ||||||||||| Sbjct 467298 TGGGTGTCAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTG-CCAACTACAACAACC 467240 Query 2940 ACCAGTACCGAGAGATCAAAAGCGGCTCCGTCGAC-GGAAGCAACGCCAACGCCTACTTT 2998 ||| || | | ||||| | | || | || |||| ||| | |||| |||| Sbjct 467239 ACCTGTTCAAGAAAATCAACAAC-TCTGGAGCAACTGGAAACAATGACAACCAGTACTAC 467181 Query 2999 GGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCACTGGAGCCCC 3058 |||| | ||| || ||||| ||||| ||||| || || || || |||||| || Sbjct 467180 GGATTCGGCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCCACTTTTCCCTT 467122 Query 3059 CGAGACTGGCAAAGACTCATCAACAACTACTGGGG 3093 | |||||||||| |||||||| | | ||||||| Sbjct 467121 CAAGACTGGCAACATCTCATCAATAGCCACTGGGG 467087 Score = 183 bits (202), Expect = 9e-43 Identities = 289/409 (71%), Gaps = 4/409 (1%) Strand=Plus/Minus Query 2200 AGTAGTCATGTCTTTTGTTGATCACCCTCCAGATTGGTTGGAAGAAGTTGGTGAAGGTCT 2259 ||||||||||||| |||||| ||| ||||||| |||||||||| | | ||| | || Sbjct 467999 AGTAGTCATGTCTCTTGTTGCTCATCCTCCAGCTTGGTTGGAAAAGGCTGGCTGTGCACT 467940 Query 2260 TCGCGAGTTTTTGGGCCTTGAAGCGGGCCCACCGAAACCAAAACCCAATCAGCAGCATCA 2319 | |||||||| ||||| || | || || || |||||| | ||||| || || | Sbjct 467939 TGCTGAGTTTTTTCATCTTGAGGCAAGACCTCCAAAGCCAAAAGCTAATCAACA-AATTA 467881 Query 2320 AGATCAAGCCCGTGGTCTTGTGCTGCCTGGTTATAACTATCTCGGACCCGGAAACGGTCT 2379 ||| | || | || | ||| | ||||| || || ||| | ||| | || ||||| Sbjct 467880 AGACAACACCAGAGGGCCTGTTGTTCCTGGATACAAATATTTTGGATCATTTAATGGTCT 467821 Query 2380 CGATCGAGGAGAGCCTGTCAACAGGGCAGACGAGGTCGCGCGAGAGCACGACATCTCGTA 2439 | | |||||||| || ||||| |||||| ||| || ||||||||||| | || Sbjct 467820 AGGTAAAGGAGAGCTAGTTAACAGAGCAGACACGGTTGCCAAAGAGCACGACAAGGCATA 467761 Query 2440 CAACGAGCAGCTTGAGGCGGGAGACAACCCCTACCTCAAGTACAACCACGCGGACGCCGA 2499 || | | ||| | || || | || | || | ||||||||||| || || || Sbjct 467760 TAATCAACTCCTTAACAGCGGTGATTATCCACATCTAACATACAACCACGCAGATGCTGA 467701 Query 2500 GTTTCAGGAGAAGCTCGCCGACGAC-ACATCCTTCGGGGGAAACCTCGG-AAAGGCAGTC 2557 ||||||| |||||||||| |||||| ||||| | || |||||||| || ||| | || Sbjct 467700 GTTTCAGAAGAAGCTCGCAGACGACAACATCGCTAGGTGGAAACCTTGGAAAAAGTTGTT 467641 Query 2558 TTTCAGGCCAAGAAAA-GGGTTCTCGAACCTTTTGGCCTGGTTGAAGAG 2605 || |||||||| |||| |||||| |||||| | || ||||| ||| || Sbjct 467640 TTCCAGGCCAAAAAAACGGGTTCCCGAACCCTGTGCTCTGGTAGAAAAG 467592 Score = 179 bits (198), Expect = 1e-41 Identities = 296/425 (70%), Gaps = 9/425 (2%) Strand=Plus/Minus Query 1352 GCCACGACCGGCAAGACCAACATCGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGC 1411 || || ||||| ||||| ||||| || || |||||| | | ||| | ||||| || Sbjct 468852 GCAACTACCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTTGTTCTGTTTTATGGA 468793 Query 1412 TGCGTGAACTGGACCAATGAAAACTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATT 1471 || || || |||||||||||||||||||| || ||||| | | |||| ||| |||| Sbjct 468792 TGTGTTAATTGGACCAATGAAAACTTTCCATTCAATGATTACATCAACAAGATGATCATC 468733 Query 1472 TGGTGGGAGGAGGGAAAGATGACCAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGG 1531 |||||||| || ||||| ||||| |||||| | | | || || ||||||| || | Sbjct 468732 TGGTGGGAAGAAGGAAAAATGACGGCCAAGGTTG-TCAGTCTGCAGAGGCCATTCTCGAT 468674 Query 1532 GGCTCAAAG----GTGCGGGTCGATCAGAAATGTAAATCCTCTGTTCAAATTGATTCTAC 1587 || ||| || | | || || || || || |||||| || | |||| || Sbjct 468673 GG----AAGTCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAGACTGATCTGAC 468618 Query 1588 CCCTGTCATTGTAACTTCCAATACAAACATGTGTGTGGTGGTGGATGGGAATTCCACGAC 1647 || || | ||| ||||| ||||| ||||||||||| || ||||||| ||||| | || Sbjct 468617 ACCAGTGACTGTGACTTCAAATACTAACATGTGTGTTGTCATGGATGGAAATTCAATAAC 468558 Query 1648 CTTTGAACACCAGCAGCCGCTGGAGGACCGCATGTTCAAATTTGAACTGACTAAGCGGCT 1707 || ||||| || ||||| ||||||| | || |||||||||||||| | | || Sbjct 468557 ATTCGAACATCAACAGCCTTTGGAGGATCAAATATTCAAATTTGAACTTGCCTGCCAACT 468498 Query 1708 CCCGCCAGATTTTGGCAAGATTACTAAGCAGGAAGTCAAGGACTTTTTTGCTTGGGCAAA 1767 | || ||| | ||||| || || || |||| || || ||||| |||||||| Sbjct 468497 TGATCATGACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTTGCCTGGGCAAA 468438 Query 1768 GGTCA 1772 || || Sbjct 468437 GGCCA 468433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14740520850770