Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq546 271 2e-69 >seq546 Length=548233 Score = 271 bits (300), Expect = 2e-69 Identities = 408/577 (71%), Gaps = 21/577 (4%) Strand=Plus/Minus Query 2799 CAGCAGCGCCCTCTAGTGTGGGATCTGGTACAGTGGCTGCAGGCGGTGGCGCACCAATGG 2858 ||| || | |||| | | |||||||| ||||| |||||||||| |||||| ||||||| Sbjct 467427 CAGTAGTGTCCTCAAATTTGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGG 467368 Query 2859 CAGACAATAACGAAGGTGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATT 2918 ||||| | ||| |||| |||||||| | | |||| ||||||||||||||||||| Sbjct 467367 GCCACAATGTGCAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATT 467308 Query 2919 CCACATGGCTGGGCGACAGAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCT 2978 |||||||| |||| | ||||||||| || | ||| | |||||||||||| ||| || Sbjct 467307 CCACATGGGTGGGTGTCAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTG-CCAACT 467249 Query 2979 ACAACAACCACCTCTACAAGCAAATCTCCA---GTGAAACTGCAGGTAGTACCAACGACA 3035 ||||||||||||| | |||| ||||| || || | ||| | | | ||| |||| Sbjct 467248 ACAACAACCACCTGTTCAAGAAAATCAACAACTCTGGA---GCAACTGGAAACAATGACA 467192 Query 3036 ACACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCC 3095 || |||| ||| | | ||| || ||||| || || ||||| || | || || ||| Sbjct 467191 ACCAGTACTACGGATTCGGCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCC 467133 Query 3096 ACTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGA 3155 |||| || | | |||||||| | |||||||| | | |||||||| || || | Sbjct 467132 ACTTTTCCCTTCAAGACTGGCAACATCTCATCAATAGCCACTGGGGA------CCAAAAA 467079 Query 3156 AGCTGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTA 3215 ||| || ||||| |||||||| || |||| || |||| || ||||| | Sbjct 467078 GGCTTGACTTGAAGCTTTTCAACATTCAAGTCAGAGAAGTCATAACACATGACAAC---- 467023 Query 3216 CGACCATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGC 3275 |||| ||||||| || || ||||| || ||||| || ||||||| || || |||| Sbjct 467022 ---ACATCACTAATAATCTCACAAGCACAATCCAGGTGTTGGCGGACTCAGACTATCAGC 466966 Query 3276 TGCCGTACGTCCTCGGCTCTGCGCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCT 3335 | | ||| | || ||| ||| | || ||||||||||| || || | || | Sbjct 466965 TACGGTATGCAGCGGGGAATGCACACGAAGGAACGCTGCCTCCGTTTCCAGCAGGTGTAT 466906 Query 3336 TCATGATTCCTCAGTACGGCTACCTGACTCTCAACAA 3372 ||||| ||| ||| | || || || ||||||||||| Sbjct 466905 TCATGGCTCCACAGCATGGATATCTAACTCTCAACAA 466869 Score = 271 bits (300), Expect = 2e-69 Identities = 451/646 (70%), Gaps = 18/646 (3%) Strand=Plus/Minus Query 1207 GACATTAAAACCAACCGCATCTACCGCATCCTGGAGCTGAACGGGTACGATCCTGCCTAC 1266 |||||||| ||||| || || ||| || | || || || || || |||||||| || Sbjct 468987 GACATTAAGACCAATCGGATATACAAAATGTTTGAACTAAATGGATATGATCCTGCATAT 468928 Query 1267 GCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAAAGTTCGGGAAGCGCAACACCATCTGG 1326 || || | | |||||| || |||||||| || || | ||||| |||||| Sbjct 468927 GCTGGAAGGGCGCTGGATGGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGG 468868 Query 1327 CTGTTTGGGCCC---GCCACCACCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCC 1383 ||||||| || || || ||||| ||||| |||||||| ||||||||| | | | Sbjct 468867 GTGTTTGGTCCTAATGCAACTACCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTT 468808 Query 1384 GTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAACGATTGCGTC 1443 || | || || || || || || ||||||||||| |||||||| ||||| |||| | || Sbjct 468807 GTTCTGTTTTATGGATGTGTTAATTGGACCAATGAAAACTTTCCATTCAATGATTACATC 468748 Query 1444 GACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCC 1503 |||||||| | ||||||||||| || || || |||||||||||||| || |||| || Sbjct 468747 AACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGACGGCCAAGGTTGT-CAGTCTGCA 468689 Query 1504 AAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAG 1563 |||||||||||| || || || | | ||||||||||||||||| || ||| Sbjct 468688 GAGGCCATTCTCGATGGAAGTCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAG 468629 Query 1564 ATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGG 1623 | || | || || |||| || || || || || |||||||| | || || || || Sbjct 468628 ACTGATCTGACACCAGTGACTGTGACTTCAAATACTAACATGTGTGTTGTCATGGATGGA 468569 Query 1624 AACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGACCGGATGTTCAAATTTGAACTC 1683 || | || ||||| || || ||||| ||| |||| | || |||||||||||||| Sbjct 468568 AATTCAATAACATTCGAACATCAACAGCCTTTGGAGGATCAAATATTCAAATTTGAACTT 468509 Query 1684 ACCCGCCGTCTGGAGCACGACTTTGGCAAGGTGACGAAGCAGGAAGTCAAAGAGTTCTTC 1743 || ||| || || || |||||| | ||| | || || || ||||||||||||| Sbjct 468508 GCCTGCCAACTTGATCATGACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTT 468449 Query 1744 CGCTG------GGCCAGTGATCACGTGACCGAGGTGGCGCATGAGTTCTACGTCAGAAAG 1797 ||| ||||||||| ||| || || ||| ||||| | || | |||| Sbjct 468448 GCCTGGGCAAAGGCCAGTGA----GTG--TGATGTCACGCGGGAGTTTGATGTTA-AAAG 468396 Query 1798 GGCGGA-GCCAGCAAAAGACCCGCCCCCGATGACGCGGATATAAGC 1842 || ||| || | |||||| ||||||| || | | |||||||| Sbjct 468395 GGTGGAGGCTAAGAAAAGATCCGCCCCTTCTGCGGAGAATATAAGC 468350 Score = 77.0 bits (84), Expect = 1e-10 Identities = 204/301 (68%), Gaps = 8/301 (3%) Strand=Plus/Minus Query 2309 CCGAAACCCAAAGCCAACCAGCAAAAGCAGGACAACGGCCG-GGGTCTGGTGCTTCCTGG 2367 || || || ||||| || || |||| || ||||| | | ||| ||| || ||||||| Sbjct 467908 CCAAAGCCAAAAGCTAATCAACAAATTAAG-ACAACACCAGAGGGCCTGTTG-TTCCTGG 467851 Query 2368 CTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGGA 2427 ||||| || | ||| | || || || || | || || |||| || ||| || || Sbjct 467850 ATACAAATATTTTGGATCATTTAATGGTCTAGGTAAAGGAGAGCTAGTTAACAGAGCAGA 467791 Query 2428 CGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAA-AGCGGGTGACAATC 2486 | | | ||| |||||||||||||| || | || | || || ||| ||||| ||| Sbjct 467790 CACGGTTGCCAAAGAGCACGACAAGGCATATAATCAACTCCTTAACAGC-GGTGATTATC 467732 Query 2487 CGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGA-TACG 2545 | | || || |||||||| || || ||||||||| || || ||| || || Sbjct 467731 CACATCTAACATACAACCACGCAGATGCTGAGTTTCAGAAGAAGCTCGCAGACGACAACA 467672 Query 2546 TCATTTGGGGGCAACCTCGG-GCGAGCAGTCTTCCAGGCC-AAGAAGCGGGTTCTCGAAC 2603 || | || || ||||| || || || ||||||||| || || ||||||| ||||| Sbjct 467671 TCGCTAGGTGGAAACCTTGGAAAAAGTTGTTTTCCAGGCCAAAAAAACGGGTTCCCGAAC 467612 Query 2604 C 2604 | Sbjct 467611 C 467611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14993288627460