Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= NC_006260.1
Length=4721
Score E
Sequences producing significant alignments: (Bits) Value
seq546 271 2e-69
>seq546
Length=548233
Score = 271 bits (300), Expect = 2e-69
Identities = 408/577 (71%), Gaps = 21/577 (4%)
Strand=Plus/Minus
Query 2799 CAGCAGCGCCCTCTAGTGTGGGATCTGGTACAGTGGCTGCAGGCGGTGGCGCACCAATGG 2858
||| || | |||| | | |||||||| ||||| |||||||||| |||||| |||||||
Sbjct 467427 CAGTAGTGTCCTCAAATTTGGGATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGG 467368
Query 2859 CAGACAATAACGAAGGTGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATT 2918
||||| | ||| |||| |||||||| | | |||| |||||||||||||||||||
Sbjct 467367 GCCACAATGTGCAGGGTTCCGATGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATT 467308
Query 2919 CCACATGGCTGGGCGACAGAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCT 2978
|||||||| |||| | ||||||||| || | ||| | |||||||||||| ||| ||
Sbjct 467307 CCACATGGGTGGGTGTCAGAGTCATCACAAAATCTACCGGTACCTGGGCCCTG-CCAACT 467249
Query 2979 ACAACAACCACCTCTACAAGCAAATCTCCA---GTGAAACTGCAGGTAGTACCAACGACA 3035
||||||||||||| | |||| ||||| || || | ||| | | | ||| ||||
Sbjct 467248 ACAACAACCACCTGTTCAAGAAAATCAACAACTCTGGA---GCAACTGGAAACAATGACA 467192
Query 3036 ACACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCC 3095
|| |||| ||| | | ||| || ||||| || || ||||| || | || || |||
Sbjct 467191 ACCAGTACTACGGATTCGGCATCCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCC 467133
Query 3096 ACTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGA 3155
|||| || | | |||||||| | |||||||| | | |||||||| || || |
Sbjct 467132 ACTTTTCCCTTCAAGACTGGCAACATCTCATCAATAGCCACTGGGGA------CCAAAAA 467079
Query 3156 AGCTGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTA 3215
||| || ||||| |||||||| || |||| || |||| || ||||| |
Sbjct 467078 GGCTTGACTTGAAGCTTTTCAACATTCAAGTCAGAGAAGTCATAACACATGACAAC---- 467023
Query 3216 CGACCATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGC 3275
|||| ||||||| || || ||||| || ||||| || ||||||| || || ||||
Sbjct 467022 ---ACATCACTAATAATCTCACAAGCACAATCCAGGTGTTGGCGGACTCAGACTATCAGC 466966
Query 3276 TGCCGTACGTCCTCGGCTCTGCGCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCT 3335
| | ||| | || ||| ||| | || ||||||||||| || || | || |
Sbjct 466965 TACGGTATGCAGCGGGGAATGCACACGAAGGAACGCTGCCTCCGTTTCCAGCAGGTGTAT 466906
Query 3336 TCATGATTCCTCAGTACGGCTACCTGACTCTCAACAA 3372
||||| ||| ||| | || || || |||||||||||
Sbjct 466905 TCATGGCTCCACAGCATGGATATCTAACTCTCAACAA 466869
Score = 271 bits (300), Expect = 2e-69
Identities = 451/646 (70%), Gaps = 18/646 (3%)
Strand=Plus/Minus
Query 1207 GACATTAAAACCAACCGCATCTACCGCATCCTGGAGCTGAACGGGTACGATCCTGCCTAC 1266
|||||||| ||||| || || ||| || | || || || || || |||||||| ||
Sbjct 468987 GACATTAAGACCAATCGGATATACAAAATGTTTGAACTAAATGGATATGATCCTGCATAT 468928
Query 1267 GCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAAAGTTCGGGAAGCGCAACACCATCTGG 1326
|| || | | |||||| || |||||||| || || | ||||| ||||||
Sbjct 468927 GCTGGAAGGGCGCTGGATGGCTGGTGTCAAAAAAAGTTTGGAAAAAGAAACACTATCTGG 468868
Query 1327 CTGTTTGGGCCC---GCCACCACCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCC 1383
||||||| || || || ||||| ||||| |||||||| ||||||||| | | |
Sbjct 468867 GTGTTTGGTCCTAATGCAACTACCGGAAAGACAAACATTGCAGAAGCCATCTCATATGTT 468808
Query 1384 GTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAACGATTGCGTC 1443
|| | || || || || || || ||||||||||| |||||||| ||||| |||| | ||
Sbjct 468807 GTTCTGTTTTATGGATGTGTTAATTGGACCAATGAAAACTTTCCATTCAATGATTACATC 468748
Query 1444 GACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCC 1503
|||||||| | ||||||||||| || || || |||||||||||||| || |||| ||
Sbjct 468747 AACAAGATGATCATCTGGTGGGAAGAAGGAAAAATGACGGCCAAGGTTGT-CAGTCTGCA 468689
Query 1504 AAGGCCATTCTCGGCGGCAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAG 1563
|||||||||||| || || || | | ||||||||||||||||| || |||
Sbjct 468688 GAGGCCATTCTCGATGGAAGTCCTGTTTGTATTGACCAAAAGTGCAAGTCCTCTCAACAG 468629
Query 1564 ATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGG 1623
| || | || || |||| || || || || || |||||||| | || || || ||
Sbjct 468628 ACTGATCTGACACCAGTGACTGTGACTTCAAATACTAACATGTGTGTTGTCATGGATGGA 468569
Query 1624 AACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGACCGGATGTTCAAATTTGAACTC 1683
|| | || ||||| || || ||||| ||| |||| | || ||||||||||||||
Sbjct 468568 AATTCAATAACATTCGAACATCAACAGCCTTTGGAGGATCAAATATTCAAATTTGAACTT 468509
Query 1684 ACCCGCCGTCTGGAGCACGACTTTGGCAAGGTGACGAAGCAGGAAGTCAAAGAGTTCTTC 1743
|| ||| || || || |||||| | ||| | || || || |||||||||||||
Sbjct 468508 GCCTGCCAACTTGATCATGACTTTAGGAAGATCACAAAAACAGAGATCAAAGAGTTCTTT 468449
Query 1744 CGCTG------GGCCAGTGATCACGTGACCGAGGTGGCGCATGAGTTCTACGTCAGAAAG 1797
||| ||||||||| ||| || || ||| ||||| | || | ||||
Sbjct 468448 GCCTGGGCAAAGGCCAGTGA----GTG--TGATGTCACGCGGGAGTTTGATGTTA-AAAG 468396
Query 1798 GGCGGA-GCCAGCAAAAGACCCGCCCCCGATGACGCGGATATAAGC 1842
|| ||| || | |||||| ||||||| || | | ||||||||
Sbjct 468395 GGTGGAGGCTAAGAAAAGATCCGCCCCTTCTGCGGAGAATATAAGC 468350
Score = 77.0 bits (84), Expect = 1e-10
Identities = 204/301 (68%), Gaps = 8/301 (3%)
Strand=Plus/Minus
Query 2309 CCGAAACCCAAAGCCAACCAGCAAAAGCAGGACAACGGCCG-GGGTCTGGTGCTTCCTGG 2367
|| || || ||||| || || |||| || ||||| | | ||| ||| || |||||||
Sbjct 467908 CCAAAGCCAAAAGCTAATCAACAAATTAAG-ACAACACCAGAGGGCCTGTTG-TTCCTGG 467851
Query 2368 CTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGGA 2427
||||| || | ||| | || || || || | || || |||| || ||| || ||
Sbjct 467850 ATACAAATATTTTGGATCATTTAATGGTCTAGGTAAAGGAGAGCTAGTTAACAGAGCAGA 467791
Query 2428 CGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAA-AGCGGGTGACAATC 2486
| | | ||| |||||||||||||| || | || | || || ||| ||||| |||
Sbjct 467790 CACGGTTGCCAAAGAGCACGACAAGGCATATAATCAACTCCTTAACAGC-GGTGATTATC 467732
Query 2487 CGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGA-TACG 2545
| | || || |||||||| || || ||||||||| || || ||| || ||
Sbjct 467731 CACATCTAACATACAACCACGCAGATGCTGAGTTTCAGAAGAAGCTCGCAGACGACAACA 467672
Query 2546 TCATTTGGGGGCAACCTCGG-GCGAGCAGTCTTCCAGGCC-AAGAAGCGGGTTCTCGAAC 2603
|| | || || ||||| || || || ||||||||| || || ||||||| |||||
Sbjct 467671 TCGCTAGGTGGAAACCTTGGAAAAAGTTGTTTTCCAGGCCAAAAAAACGGGTTCCCGAAC 467612
Query 2604 C 2604
|
Sbjct 467611 C 467611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14993288627460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |