Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq546 174 5e-40 >seq546 Length=548233 Score = 174 bits (192), Expect = 5e-40 Identities = 351/511 (69%), Gaps = 20/511 (4%) Strand=Plus/Minus Query 2655 ATCAAATACAATGGCTCAAGGAGGTGGCGGACCAATGGCAGACGATAACCAAGGCGCCGA 2714 ||| | |||||||||| ||| |||||| | ||||||| || || || || |||| Sbjct 467405 ATCTAGTACAATGGCTGCAGGTGGTGGCAGCCCAATGGGCCACAATGTGCAGGGTTCCGA 467346 Query 2715 GGGAGTGGGTAATGCCTCGGGAGATTGGCATTGCGATACCCAATGGCTGGGCGACCACGT 2774 |||||||| | | |||||||| |||||||||||||| || |||| |||| | | || Sbjct 467345 TGGAGTGGGCACTTCCTCGGGAAATTGGCATTGCGATTCCACATGGGTGGGTGTCAGAGT 467286 Query 2775 CATTACAAAATCTACCAGAACTTGGGTTCTGCCCTCTTACGGGAATCATCTCTACTCGCC 2834 ||| |||||||||||| | || |||| ||||| | ||| || || || | | | Sbjct 467285 CATCACAAAATCTACCGGTACCTGGGCCCTGCCAAC-TACAACAACCACCTGTTCAAGAA 467227 Query 2835 CATCAACTTTGATGGAACCACAGGGAACGGAACCCAAGCCGCTTACTGCGGATACGCTAC 2894 |||||| |||| | || || ||| | ||| | | |||| ||||| || | Sbjct 467226 AATCAACAACTCTGGAGCAACTGGAAAC-AATGACAACCAG--TACTACGGATTCGGCAT 467170 Query 2895 CCCCTGGGCCTACTTTGACTTTAACCGATTCCACTGCCACTTTTCCCCCCGAGACTGGCA 2954 || |||| ||||| ||||| || || || || |||||||||||| | ||||||||| Sbjct 467169 CCTGTGGGGATACTTGGACTTCAATCGGTT-CATGGCCACTTTTCCCTTCAAGACTGGCA 467111 Query 2955 AAGACTCATTAACAACCATACCGGAATACGACCAGTCGGACTCAAATTCAAGCTGTTCAA 3014 | ||||| || | || || || ||||| | || | || ||||| ||||| Sbjct 467110 ACATCTCATCAATAGCC--ACTGG----GGACCAAAAAGGCTTGACTTGAAGCTTTTCAA 467057 Query 3015 CATCCAGGTCAAGGAAATCACAGTACAAGATTCGACCAAAACGATCGCCAACAATCTCAC 3074 ||| || |||| ||| ||| | ||| || ||| || ||| | || |||||||| Sbjct 467056 CATTCAAGTCAGAGAAGTCATAACACATGA------CAACAC-ATCACTAATAATCTCAC 467004 Query 3075 CAGCACCGTACAGGTCTTTGCGGACACGGAGCACCAGCTCCCGTACGTATTAGGAAATGC 3134 ||||| | ||||| || |||||| | || | ||||| | ||| | | || ||||| Sbjct 467003 AAGCACAATCCAGGTGTTGGCGGACTCAGACTATCAGCTACGGTATGCAGCGGGGAATGC 466944 Query 3135 -CACGCAGGGCACGTTTCCTCCCTTTCCGGC 3164 |||| | || ||| | ||||| ||||| || Sbjct 466943 ACACG-AAGGAACGCTGCCTCCGTTTCCAGC 466914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14574142061050