Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq51 84.2 7e-13 >seq51 Length=18513618 Score = 84.2 bits (92), Expect = 7e-13 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1608 TGTGTTAACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATT 1667 || ||||| || || ||||| || |||||||||||||||| ||| || | || || ||| Sbjct 1311702 TGGGTTAAATGAACCAATGAAAAATTTCCTTTTAATGATTCTGTGGACAGAAAACTCATT 1311643 Query 1668 TGGTGGGAGGAGGGAAAAATGACTAATAAGGTTGTTGAATCTGCAAAAGCAATTTTGG 1725 |||||||| ||| ||||| | |||| || || || ||| | || ||||| || ||| Sbjct 1311642 TGGTGGGAAGAGAGAAAATTAGCTAA-AAAGTGGTAGAAACAGCTAAAGCTGTTATGG 1311586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16218258838155