Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_028045.1 Length=1767 Score E Sequences producing significant alignments: (Bits) Value seq590 77.0 4e-11 seq516 77.0 4e-11 >seq590 Length=3474509 Score = 77.0 bits (84), Expect = 4e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 986 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGGAGTGATCTA 1030 ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1816315 CAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAGTGATCTA 1816271 >seq516 Length=13457255 Score = 77.0 bits (84), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 6/74 (8%) Strand=Plus/Minus Query 966 TATTGTG---AGT-AAATCACAATCAGATACTACACTTGATCTTAGCCAAAAGGCCGAGG 1021 ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 12628065 TATTGTGCTAAGTGAAATCA--ATCAGATACTACACTTGATCTTAGCCAAAAGGCCGAGA 12628008 Query 1022 AGTGATCTAAACCA 1035 || ||| ||| || Sbjct 12628007 AGCGATTGAAATCA 12627994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5545512854362