Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_021862.1
Length=8576
Score E
Sequences producing significant alignments: (Bits) Value
seq10785 253 1e-63
seq12101 159 2e-35
seq12483 141 5e-30
seq11673 141 5e-30
seq11475 141 5e-30
seq11176 141 5e-30
seq9683 141 5e-30
seq8561 141 5e-30
seq7272 141 5e-30
seq2160 141 5e-30
seq11988 118 6e-23
seq3977 104 1e-18
>seq10785
Length=1019
Score = 253 bits (280), Expect = 1e-63
Identities = 633/942 (67%), Gaps = 36/942 (4%)
Strand=Plus/Plus
Query 6559 CATCCACAGATTGCTCAGGGCAAACAGCGTGTGTAATTGCTGTGTGTTCTTTATCAAGCC 6618
|||||||| || || |||||||| ||||| |||||||| ||||||||| |||| ||
Sbjct 12 CATCCACAAGTTCGCCAAGGCAAACAATGTGTGCAATTGCTGCGTGTTCTTTCTCAAACC 71
Query 6619 TCGATAGCGCACCCTCAAGTGCCCAAACTGGCGCTTGATGACTCGGAACGGATGTTCCAC 6678
|| ||||| || | | ||| |||||||| ||||||||||||| ||| || ||||| ||
Sbjct 72 TCTGTAGCGAACTTTGACGTGTCCAAACTGACGCTTGATGACTCTGAATGGGTGTTCGAC 131
Query 6679 GCGGGCACGAATGCGCGCCTTGACCCGCTCCAGCTCATCGACGAGCGCACCCGACACGGT 6738
||| || || | ||| ||| |||| |||| || | | || | |||
Sbjct 132 CTTGGCCCGGATCTTGGACTTCACCTGCTCAAGCTGCTCTTGCATGG-ACGATATCGGGT 190
Query 6739 GCTCTTGTCCAAG-GCGCGGCGTTTGCCCGGGCGTAATGCC-ACATGCCAACGCACCTTC 6796
||| || | || || ||| | || | || | ||| | | |||||| | | ||
Sbjct 191 GCTGATGGTCTAGAGCCTTGCGCTGGCT-GCGCTTCATGGCGATATGCCATTGGAATTTG 249
Query 6797 AACTC-----------CTG-CACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCG 6844
||| ||| || || ||| ||||| || || ||||| |||||
Sbjct 250 CGCTCAGGTTTGGGCTCTGGCATATCGGGGCGTTTGTCAGCACCTTGGTAGCCTGCATCA 309
Query 6845 CCGAACACGTCGGCCTCCTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGAC 6904
|| | | || |||| || ||||||| || ||| | | || || ||||
Sbjct 310 CCATAGCCATCAACCTCTTTTCCATGCAGCAGGCTGTTA-GATTCAACGACATCACTGAC 368
Query 6905 GTTGGCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCACACCAATGTG 6964
|||||| | |||||| ||||| ||||||| || || || |||||||| ||||| ||
Sbjct 369 GTTGGCCGATGTGCCCCGCACGGTATGCACCAAGCCAGAATCGGCATCCACGCCAATATG 428
Query 6965 CGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCAC- 7023
|| ||||||||||| | ||||||||| || |||||||||||||||||||| || ||||
Sbjct 429 TGCCTTCATGCCGAAGTACCACTGGTTGCCCTTCTTGGTCTGGTGCATCTCAGGATCACG 488
Query 7024 -GCTTGCCGCTGCCATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTCGACCACC 7082
| ||| | ||| |||||||||||||||||||| ||||||| | ||| || || |
Sbjct 489 AGATTG--GGTGCTGTTCTTGGTCGAACTGGGCGCTGCAATCAATGTGGCATCCACGATG 546
Query 7083 GTGCACGTCTTTGAGCAG--GTAGCCCTTCGCACT-GAGTTGCGCGTTGACGGTCTGCAG 7139
|| | || || | || | ||| || | || || | ||||| ||| |||
Sbjct 547 GTTC----CTGTGCGAAGCAGCAGCTTTTTACTCTCCAGCAAGTCCGTGACGATCTTCAG 602
Query 7140 AAATTGCTCGGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCG 7199
|| ||||||||| | | |||| |||| | ||| || || |||| ||| || |
Sbjct 603 AATTTGCTCGGCCAGTTTGTGTTTTTCCAATAGGTGACGGAAACGCAAGATGGTGCTCTC 662
Query 7200 GTCCGGCAGTCG-GCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGT 7258
||| ||| || | ||| | | ||| || |||||| |||| |||| |||| || ||
Sbjct 663 GTCAGGC-GTGGCGCTACCCCATGACAGGCCAACGAATTCCCGAAACAAGGGCATGT-GT 720
Query 7259 ACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGC 7318
|| || ||||||||||| || | || |||||| ||||||| |||||| ||||
Sbjct 721 --AGTGCTTCTTCCATCGCTGGATCACTGAGGTTGAACCACTGCTGCATAAAGTGAATGC 778
Query 7319 GCAGCATCGTTTCGACTGGAAACGGCTTCCGACCCGT-CGCCTTGACCGGCGCATGCGGC 7377
|||||| | | | || ||||||||| || || || |||| | | || |||| ||
Sbjct 779 GCAGCAGCATCTGAACAGGAAACGGCGGTCGTCCAGTACGCCCT-TCAGGTGCATAGGGT 837
Query 7378 GCTATCAACGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATAC 7437
|| ||||| | | | ||| | ||||| ||||| || || | ||||| |||| ||| |
Sbjct 838 GCAATCAA-GTCCACCAACTCTTGCCATGGCACGACCCGCTGCATCTGCTCCAAGAATTC 896
Query 7438 CTGCTTGCGCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
| || || || | | || |||| ||||||||| ||
Sbjct 897 GCGTTTACGTGTTTTTTTGGTGGAAAGGTTCAGGCCAAGATC 938
>seq12101
Length=20570
Score = 159 bits (176), Expect = 2e-35
Identities = 181/242 (75%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 6551 CCGCGCATCATCCACAGATTGCTCAGGGCAAACAGCGTGTGTAATTGCTGTGTGTTCTTT 6610
|||||| |||||| |||||| ||| |||||||||||||| || ||| ||||||||
Sbjct 15705 CCGCGC--CATCCATAGATTGGACAGTGCAAACAGCGTGTGCAACTGCGCAGTGTTCTTC 15648
Query 6611 ATCAAGCCTCGATAGCGCACCCTCAAGTGCCCAAACTGGCGCTTGATGACTCGGAACGGA 6670
|||| || || ||||||||| | | |||||| |||||||||||||| || |||||||||
Sbjct 15647 TTCAACCCGCGGTAGCGCACCTTGACGTGCCCGAACTGGCGCTTGATCACCCGGAACGGA 15588
Query 6671 TGTTCCACGCGGGCACGAATGCGCGCCTTGACCCGCTCCAGCTCATCGACGAGCGCACCC 6730
|| || || ||| || |||| |||||||| | ||| | || |||| | ||| |
Sbjct 15587 TGCTCGACCTTGGCCCGGATGCCCGCCTTGAGCTTCTCGACCTTGTCGATCAAGGCATCA 15528
Query 6731 GACACGGTGCTCTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGC 6790
| || || |||||||| || ||||||||||||| ||| | || | | ||| |||
Sbjct 15527 ATCGCGTTGTCCTTGTCCAGTGCCCGGCGTTTGCCCGCGCGCATGGCGATGTTCCAGCGC 15468
Query 6791 AC 6792
||
Sbjct 15467 AC 15466
>seq12483
Length=59992
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 14215 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 14156
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 14155 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 14096
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 14095 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 14037
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 14036 CCACGGTGTGAACCAGCCCGGAATC 14012
Score = 136 bits (150), Expect = 2e-28
Identities = 232/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 13810 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 13751
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 13750 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 13691
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 13690 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 13631
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 13630 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 13574
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 13573 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 13515
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
||||||| || | ||||||| ||||||||| ||
Sbjct 13514 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTC 13481
>seq11673
Length=6241
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 4379 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 4438
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 4439 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 4498
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 4499 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 4557
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 4558 CCACGGTGTGAACCAGCCCGGAATC 4582
Score = 136 bits (150), Expect = 2e-28
Identities = 284/419 (68%), Gaps = 8/419 (2%)
Strand=Plus/Plus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 4784 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 4843
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 4844 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 4903
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 4904 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 4963
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 4964 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 5020
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 5021 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 5079
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTCGCTTTGTTTCATGGGTTCATCCAGCG 7505
||||||| || | ||||||| ||||||||| || || ||||| ||| |
Sbjct 5080 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTCTTGCTGGGTCATGACGCCATTGTTCC 5139
Query 7506 TTGCGAACCTTCCTTCGACTGCCCGCGCTTG-CGGGAGTTTTGAACACTATCCCTAGGG 7563
| || || | ||| | ||| ||||| | || |||||||||| ||||||||||
Sbjct 5140 TGCCGCACTTCGCTTACGCCATCCGGGCTTGACCGGGGTTTTGAACATCATCCCTAGGG 5198
>seq11475
Length=21818
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 9667 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 9608
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 9607 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 9548
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 9547 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 9489
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 9488 CCACGGTGTGAACCAGCCCGGAATC 9464
Score = 136 bits (150), Expect = 2e-28
Identities = 284/419 (68%), Gaps = 8/419 (2%)
Strand=Plus/Minus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 9262 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 9203
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 9202 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 9143
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 9142 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 9083
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 9082 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 9026
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 9025 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 8967
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTCGCTTTGTTTCATGGGTTCATCCAGCG 7505
||||||| || | ||||||| ||||||||| || || ||||| ||| |
Sbjct 8966 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTCTTGCTGGGTCATGACGCCATTGTTCC 8907
Query 7506 TTGCGAACCTTCCTTCGACTGCCCGCGCTTG-CGGGAGTTTTGAACACTATCCCTAGGG 7563
| || || | ||| | ||| ||||| | || |||||||||| ||||||||||
Sbjct 8906 TGCCGCACTTCGCTTACGCCATCCGGGCTTGACCGGGGTTTTGAACATCATCCCTAGGG 8848
>seq11176
Length=58678
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 6461 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 6402
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 6401 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 6342
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 6341 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 6283
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 6282 CCACGGTGTGAACCAGCCCGGAATC 6258
Score = 136 bits (150), Expect = 2e-28
Identities = 232/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 6056 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 5997
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 5996 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 5937
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 5936 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 5877
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 5876 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 5820
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 5819 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 5761
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
||||||| || | ||||||| ||||||||| ||
Sbjct 5760 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTC 5727
>seq9683
Length=137075
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 59215 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 59274
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 59275 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 59334
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 59335 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 59393
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 59394 CCACGGTGTGAACCAGCCCGGAATC 59418
Score = 136 bits (150), Expect = 2e-28
Identities = 232/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Plus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 59620 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 59679
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 59680 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 59739
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 59740 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 59799
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 59800 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 59856
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 59857 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 59915
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
||||||| || | ||||||| ||||||||| ||
Sbjct 59916 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTC 59949
>seq8561
Length=47729
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 21506 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 21565
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 21566 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 21625
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 21626 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 21684
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 21685 CCACGGTGTGAACCAGCCCGGAATC 21709
Score = 136 bits (150), Expect = 2e-28
Identities = 232/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Plus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 21911 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 21970
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 21971 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 22030
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 22031 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 22090
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 22091 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 22147
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 22148 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 22206
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
||||||| || | ||||||| ||||||||| ||
Sbjct 22207 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTC 22240
>seq7272
Length=98981
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 54267 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 54208
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 54207 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 54148
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 54147 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 54089
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 54088 CCACGGTGTGAACCAGCCCGGAATC 54064
Score = 136 bits (150), Expect = 2e-28
Identities = 232/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 53862 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 53803
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 53802 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 53743
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 53742 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 53683
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 53682 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 53626
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 53625 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 53567
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
||||||| || | ||||||| ||||||||| ||
Sbjct 53566 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTC 53533
>seq2160
Length=5145
Score = 141 bits (156), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 6742 CTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCAACGCACCTTCAACTC 6801
||||||||| ||||||||||| |||||||| | |||||||||||| | | | |
Sbjct 2455 CTTGTCCAACGCGCGGCGTTTACCCGGGCGCATGGCCACATGCCAATTGGCTTGGATGCC 2514
Query 6802 CTGCACCTCTTCGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTC 6861
|| || ||||| | ||| | ||||||||||| |||||| ||||||| || |||
Sbjct 2515 TTGTACTTCTTCTCTTTTGGTCACACCCTGATAGCCCGCATCGGCGAACACATCCATCTC 2574
Query 6862 CTTGCCATGCACCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCA 6921
| |||||| || | || || ||| |||||| |||||||||||||| |||||||| |
Sbjct 2575 TTCGCCATGGACGAGCGCACTGGCCTG-CGTCACATCGTTGACGTTGGCAGCCGTGCCGA 2633
Query 6922 CTACGGTGTGCACCAGCCCCGAGTC 6946
| |||||||| |||||||| || ||
Sbjct 2634 CCACGGTGTGAACCAGCCCGGAATC 2658
Score = 136 bits (150), Expect = 2e-28
Identities = 232/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Plus
Query 7149 GGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAG 7208
||| |||||||| || |||| ||| |||||||||| |||||||||||||| || |
Sbjct 2860 GGCCAACTGGTGCTCTTCGAGCAGGTGGCGAAAGCGCAAGATGCTGACCCGGTCGGGGAT 2919
Query 7209 TCGGCTTATGCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTC 7268
|| | | || || | || | || |||| || ||| |||| | ||
Sbjct 2920 GCGCTCGACACTGGAGAGGCCAACAAACTCGCGGTACAGCGCGGTCTCGAACAGGACTTC 2979
Query 7269 TTCCATCGCCACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGT 7328
|||||| |||| ||| | || ||||||||||| || || || || ||||||||||| ||
Sbjct 2980 TTCCATGGCCAGGTCACTAAGGCCGAACCATTGTTGGAGGAAATGAATGCGCAGCATGGT 3039
Query 7329 TTCGACTGGAAACGGCTTCCGACCCGTCGCCTTGACC---GGCGCATGCGGCGCTATCAA 7385
| | ||| ||| ||||| ||| ||| | || | |||||||| ||||
Sbjct 3040 CGCCAGCTCAAAAGGCGGGCGACCGGTC---TTGGCGCGTGGTGTGTGCGGCGCAATCAG 3096
Query 7386 CGCCAAAAAACGCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGC 7445
|| || || | || |||||||||||| | |||||||| || || || ||| |||||
Sbjct 3097 CGACAGCAA-CTCCGTCCACGGCACCACCAGGTCCATCTCGTCGAGGAACACCGCCTTGC 3155
Query 7446 GCGTGCGTCGGTTGCTCAGGTCCAGGCCAAGGTC 7479
||||||| || | ||||||| ||||||||| ||
Sbjct 3156 GCGTGCGCCGCGTACTCAGGTTCAGGCCAAGTTC 3189
>seq11988
Length=3048
Score = 118 bits (130), Expect = 6e-23
Identities = 190/272 (70%), Gaps = 1/272 (0%)
Strand=Plus/Minus
Query 6813 CGCGCTTGTCGATGCCCTGATAGCCGGCATCGCCGAACACGTCGGCCTCCTTGCCATGCA 6872
|||| ||| | | |||||||||||| || ||||| | |||| | || ||| ||||
Sbjct 2381 CGCGTTTGCCCACGCCCTGATAGCCTGCGTCGCCCAGCACGGCCTTTTCACCGCCGTGCA 2322
Query 6873 CCAATGCGTTGCGCTGGCGTCACGTCGTTGACGTTGGCGGCCGTGCCCACTACGGTGTGC 6932
|| || | |||| ||||||||| || ||| | |||||||| || || | ||||
Sbjct 2321 GCAGCGCATGAGTCTGG-GTCACGTCGGCCACATTGCCAGCCGTGCCGACCACCGAGTGC 2263
Query 6933 ACCAGCCCCGAGTCCGCATCCACACCAATGTGCGCTTTCATGCCGAAATGCCACTGGTTA 6992
|||| || | | || |||||| || | |||||| |||||||| || ||||| | |||
Sbjct 2262 ACCAATCCAGTGGCCATATCCACGCCCACGTGCGCCTTCATGCCAAAGTGCCAGTCGTTC 2203
Query 6993 CCTTTCTTGGTCTGGTGCATCTCTGGGTCACGCTTGCCGCTGCCATTCTTGGTCGAACTG 7052
|| || || | ||||||||| || | |||||| | | | |||||| |||||
Sbjct 2202 CCCTTTTTCGACTGGTGCATTTCGGAGTCACGTTCTTTGTCCCGATTCTTCGTCGACGGC 2143
Query 7053 GGCGCGGCAATCAGCGAGGCGTCGACCACCGT 7084
||||| || |||| | ||||| || | |||
Sbjct 2142 GGCGCTGCGATCAAGGTCGCGTCCACGATCGT 2111
>seq3977
Length=12848
Score = 104 bits (114), Expect = 1e-18
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6896 GTCGTTGACGTTGGCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCA-TCCA 6954
||||| |||||||| || || |||| || ||||| ||||||| | | | || ||||
Sbjct 4536 GTCGTGCACGTTGGCTGCTGTCACCACAGCGCTGTGCGCCAGCCCGGTG-CGGCTGTCCA 4478
Query 6955 CACCAATGTGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCT 7014
| || |||||| ||||| ||||||| |||||| | || || |||||||||||||
Sbjct 4477 CGCCGATGTGCATCTTCATCCCGAAATACCACTGCTGGCCCTTGCGCGTCTGGTGCATCT 4418
Query 7015 CTGGGTCACGCTTGCCGCTGC-CATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCG 7073
| ||||| ||| ||| | | | |||||||| |||||||||||| | || | | ||||
Sbjct 4417 CGGGGTCGCGC-TGCTTGTCCGCGTTCTTGGTGGAACTGGGCGCGCCGATGATGGTGGCG 4359
Query 7074 TCGACCACCGTGC 7086
|| || | ||||
Sbjct 4358 TCCACGATGGTGC 4346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27323370261040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |