Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_023586.1 Length=8460 Score E Sequences producing significant alignments: (Bits) Value seq13028 134 7e-28 >seq13028 Length=872 Score = 134 bits (148), Expect = 7e-28 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 7137 CAGCTACCTGCCGGGCTGGTACACGCATGGCCGGCTGCAACCGCAGAAGGTGCGTGGCAT 7196 |||||||||||| |||||||| || ||||| ||| |||| || ||||||||||| ||||| Sbjct 1 CAGCTACCTGCCCGGCTGGTATACACATGGTCGGTTGCAGCCTCAGAAGGTGCGCGGCAT 60 Query 7197 AGAAGCGAAACTGGACGAACGACGCAAGATTCTGAAGCTGCGCGAAGCCGGGATCATCAC 7256 ||| || || || | || || ||||||||||| |||||||| || ||||| ||||| || Sbjct 61 AGAGGCCAAGCTCAATGAGCGCCGCAAGATTCTCAAGCTGCGTGAGGCCGGCATCATTAC 120 Query 7257 GCAAGAGCA 7265 ||| ||||| Sbjct 121 GCAGGAGCA 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26952233147424