Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq11495 316 7e-83 >seq11495 Length=911852 Score = 316 bits (350), Expect = 7e-83 Identities = 458/640 (72%), Gaps = 6/640 (1%) Strand=Plus/Plus Query 1334 AGCTGCACTGGAAAATGCCCGTGCTGAAATGTTATTGACAAAGACTGCAACTGATTACCT 1393 ||| |||||||| || | |||||| || | |||| ||| | || || ||||| Sbjct 675970 AGCAGCACTGGAGAACGTGTAAGCTGAAGTGCTCCTGACGAAGTCGGCCGAAGACTACCT 676029 Query 1394 GATAGGAAAAGACCCTGTCCTGGATATAACTAAGAATAGGGTCTATCAAATTCTGAAAAT 1453 | |||| || || ||| ||| || || ||||| | ||| | ||| || | | | Sbjct 676030 GCTAGGCAAGTTTCCAGTCGGGGACATCACCAAGAACAAGGTGTTCCAACTTTTCCAGGT 676089 Query 1454 GAATAACTACAACCCTCAATACATAGGAAGTATCCT-GTGCGGCTGGGTGAAGAGAGAGT 1512 |||| ||| |||| | || | ||||| || || ||||| | | |||| Sbjct 676090 GAATCGGTACGACCCCGTCTTGGCAGCGAACATCCTAGTTCG-CTGGGCCCGGTGGGAGT 676148 Query 1513 TCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATTG 1572 ||||||| | || ||||| ||| ||||| ||||||| |||||| | ||||| ||||| | Sbjct 676149 TCAACAAGTGCAATGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAACATCG 676208 Query 1573 CAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACT 1632 || ||||||||||||||||| | || |||||||||| ||||||||||||||||||| Sbjct 676209 TGGAGGCTATTGCCCATGCTGTGCTATTTTATGGCTGTGGAAACTGGACTAATGAGAACT 676268 Query 1633 TTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACTA 1692 ||||||| | ||| || || ||||| ||| ||||||||||||||| ||||| | ||||| Sbjct 676269 TTCCTTTCAGTGACTGGGTAGATAAGATGGCGATTTGGTGGGAGGAAGGAAAGACGACTA 676328 Query 1693 ATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGT-CCGGGTAGACCAG 1751 ||| | || || ||||| ||||| |||||||| ||||| || || | |||| || || Sbjct 676329 GTAAAATCGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGGCCGTGCGGGGTTGATCAA 676388 Query 1752 AAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTATTACTAGTAATACTGAT 1811 ||||||||||| ||||| |||||||| || |||||| ||||||| ||||||| || Sbjct 676389 AAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATAT 676448 Query 1812 ATGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACATAGAATACCATTAGAGGAG 1871 | ||||| | |||||||| ||| ||||| ||||||||| || || ||||| Sbjct 676449 AAGTGTACTGTGGTTGATGGGAACAGCACTACCTTGGAACATAAGGAGCCTTTGGAGGAA 676508 Query 1872 CGTATGTTTCAAATTGTCCTATCACA-TAAATTGGAGCCTTCTTTTGGAAAAATTTCTAA 1930 | ||||| | || | ||||| |||| || | | ||||| |||| ||| Sbjct 676509 AGAATGTTCC--TTTTTAGGTTCACAGTAAAACTCAGGCATGATTTGGGGAAATAAGTAA 676566 Query 1931 AAAAGAAGTCAGAGAATTTTTCAAATGGGCCAATGACAAT 1970 | || | |||||||||||| | |||| | |||||||| Sbjct 676567 ATGGGAGATAAGAGAATTTTTCCAGTGGGGCCATGACAAT 676606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16225121473165