Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001701.1
Length=5106
Score E
Sequences producing significant alignments: (Bits) Value
seq91248 259 2e-65
seq65713 253 7e-64
>seq91248
Length=32913
Score = 259 bits (286), Expect = 2e-65
Identities = 264/341 (77%), Gaps = 14/341 (4%)
Strand=Plus/Plus
Query 1507 GAGAGTTCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCA 1566
|||||||||||||| |||| |||||||| ||||||||||||| ||||| ||||||||||
Sbjct 7980 GAGAGTTCAACAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCA 8039
Query 1567 ACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATG 1626
|||| ||||| |||||||||||||||| | |||||| ||||||||| |||||||||||
Sbjct 8040 ACATCGCAGAGGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATG 8099
Query 1627 AGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAA 1686
| |||||||| |||||||| ||||| || |||||| | ||||||| || |||||| | |
Sbjct 8100 A-AACTTTCC-TTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGA 8157
Query 1687 TGACTAATAAGGTTGTTGAATCTGCAAAAGC---AAT--------TTTGGGAGGGTCTGC 1735
| |||||| ||||| ||||||| ||||| ||| |||| |||| ||
Sbjct 8158 TAGTTAATAAAGTTGTGGAATCTGTTAAAGCCAAAATGGGGGTGGGGTGGGGTGGTCAGC 8217
Query 1736 TGTCCGGGTAGACCAGAAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTAT 1795
||| ||| | || |||||||||| |||||| || ||||| || |||||||| ||
Sbjct 8218 CATCCAGGT-TATCAAAAATGTAAAGTATCTGTACAAATAGAACCCACGCCTGTAATCAT 8276
Query 1796 TACTAGTAATACTGATATGTGTATGATTGTTGATGGCAACT 1836
|| | ||| |||| | || || | | || ||||||||||
Sbjct 8277 AACAAATAAAACTGGTGTGAGTTTAGTAGTAGATGGCAACT 8317
>seq65713
Length=16701
Score = 253 bits (280), Expect = 7e-64
Identities = 273/361 (76%), Gaps = 9/361 (2%)
Strand=Plus/Minus
Query 1495 GCTGGGTGAAGAGAGAGTTCAAC-AAAAGAAACGCCATATGGCTCTACGGACCTGCCACC 1553
|||| ||| ||||||| |||| ||||||||| |||| ||| || || ||| ||| ||
Sbjct 4414 GCTGAGTGTGGAGAGAGGCCAACCAAAAGAAACACCATGTGGTTCCACAGACATGCAGCC 4355
Query 1554 ACCGGGAAGACCAACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTT 1613
|| |||||||||||||| |||| ||||||||||||||||| |||||| |
Sbjct 4354 ACTGGGAAGACCAACATCACAGAGGCTATTGCCCATGCTGTG--------TGGCTGCATA 4303
Query 1614 AACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGG 1673
| | || ||||| ||||||||||||||||| | | ||||||||| | ||||||| |
Sbjct 4302 ACCCAGAGTAATGGAAACTTTCCTTTTAATGACTATAGGGATAAAATGATTATTTGGTAG 4243
Query 1674 GAGGAGGGAAAAATGACTAATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCT 1733
|||||||| |||||||||||| | ||||| | |||||||| || ||||||| | |||
Sbjct 4242 GAGGAGGGTAAAATGACTAATGATGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCT 4183
Query 1734 GCTGTCCGGGTAGACCAGAAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATT 1793
|| | |||| || ||| |||||||| | |||| | |||||| |||||||| |||
Sbjct 4182 GCCATAAGGGTTGATCAGGAATGTAAATGGCCTGTACAAACTGAACCCACTCCTGTGATT 4123
Query 1794 ATTACTAGTAATACTGATATGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACAT 1853
||||| ||||| | ||||||||| || | || ||||| ||| ||| || | ||||||
Sbjct 4122 ATTACCAGTAACATTGATATGTGGATTGTAGTGGATGGGAACAGTACAACTTTTGAACAT 4063
Query 1854 A 1854
|
Sbjct 4062 A 4062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16195713983515
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |