Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq91248 259 2e-65 seq65713 253 7e-64 >seq91248 Length=32913 Score = 259 bits (286), Expect = 2e-65 Identities = 264/341 (77%), Gaps = 14/341 (4%) Strand=Plus/Plus Query 1507 GAGAGTTCAACAAAAGAAACGCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCA 1566 |||||||||||||| |||| |||||||| ||||||||||||| ||||| |||||||||| Sbjct 7980 GAGAGTTCAACAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCA 8039 Query 1567 ACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATG 1626 |||| ||||| |||||||||||||||| | |||||| ||||||||| ||||||||||| Sbjct 8040 ACATCGCAGAGGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATG 8099 Query 1627 AGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAA 1686 | |||||||| |||||||| ||||| || |||||| | ||||||| || |||||| | | Sbjct 8100 A-AACTTTCC-TTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGA 8157 Query 1687 TGACTAATAAGGTTGTTGAATCTGCAAAAGC---AAT--------TTTGGGAGGGTCTGC 1735 | |||||| ||||| ||||||| ||||| ||| |||| |||| || Sbjct 8158 TAGTTAATAAAGTTGTGGAATCTGTTAAAGCCAAAATGGGGGTGGGGTGGGGTGGTCAGC 8217 Query 1736 TGTCCGGGTAGACCAGAAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTAT 1795 ||| ||| | || |||||||||| |||||| || ||||| || |||||||| || Sbjct 8218 CATCCAGGT-TATCAAAAATGTAAAGTATCTGTACAAATAGAACCCACGCCTGTAATCAT 8276 Query 1796 TACTAGTAATACTGATATGTGTATGATTGTTGATGGCAACT 1836 || | ||| |||| | || || | | || |||||||||| Sbjct 8277 AACAAATAAAACTGGTGTGAGTTTAGTAGTAGATGGCAACT 8317 >seq65713 Length=16701 Score = 253 bits (280), Expect = 7e-64 Identities = 273/361 (76%), Gaps = 9/361 (2%) Strand=Plus/Minus Query 1495 GCTGGGTGAAGAGAGAGTTCAAC-AAAAGAAACGCCATATGGCTCTACGGACCTGCCACC 1553 |||| ||| ||||||| |||| ||||||||| |||| ||| || || ||| ||| || Sbjct 4414 GCTGAGTGTGGAGAGAGGCCAACCAAAAGAAACACCATGTGGTTCCACAGACATGCAGCC 4355 Query 1554 ACCGGGAAGACCAACATTGCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTT 1613 || |||||||||||||| |||| ||||||||||||||||| |||||| | Sbjct 4354 ACTGGGAAGACCAACATCACAGAGGCTATTGCCCATGCTGTG--------TGGCTGCATA 4303 Query 1614 AACTGGACTAATGAGAACTTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGG 1673 | | || ||||| ||||||||||||||||| | | ||||||||| | ||||||| | Sbjct 4302 ACCCAGAGTAATGGAAACTTTCCTTTTAATGACTATAGGGATAAAATGATTATTTGGTAG 4243 Query 1674 GAGGAGGGAAAAATGACTAATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCT 1733 |||||||| |||||||||||| | ||||| | |||||||| || ||||||| | ||| Sbjct 4242 GAGGAGGGTAAAATGACTAATGATGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCT 4183 Query 1734 GCTGTCCGGGTAGACCAGAAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATT 1793 || | |||| || ||| |||||||| | |||| | |||||| |||||||| ||| Sbjct 4182 GCCATAAGGGTTGATCAGGAATGTAAATGGCCTGTACAAACTGAACCCACTCCTGTGATT 4123 Query 1794 ATTACTAGTAATACTGATATGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACAT 1853 ||||| ||||| | ||||||||| || | || ||||| ||| ||| || | |||||| Sbjct 4122 ATTACCAGTAACATTGATATGTGGATTGTAGTGGATGGGAACAGTACAACTTTTGAACAT 4063 Query 1854 A 1854 | Sbjct 4062 A 4062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16195713983515