Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001729.1
Length=4726
Score E
Sequences producing significant alignments: (Bits) Value
seq65713 127 6e-26
seq91248 109 2e-20
>seq65713
Length=16701
Score = 127 bits (140), Expect = 6e-26
Identities = 242/351 (69%), Gaps = 14/351 (4%)
Strand=Plus/Minus
Query 2866 GGAGTGGGTAATTCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTC 2925
||||||||| | |||||||||||||||||| |||| ||||||| ||| | | ||
Sbjct 2757 GGAGTGGGTTAGATCTCAGGAAATTGGCATTGTAATTCACAATGGCAAGGCAATATGGTT 2698
Query 2926 ATCACCACCAGCACCAGAACCTGGGCCCTGCCCACTTACAACAACCATCTCTACAAGCAA 2985
| ||||| |||| | |||||| ||||| | || |||||||| | ||||| |||
Sbjct 2697 ACCACCAAGTCAACCACAGCCTGGGTACTGCCTTCCTATGACAACCATTTATACAAACAA 2638
Query 2986 ATCTCCAGCCAATCAGGAGCTTCAAACGACA-ACCA--CTACTTTGGCTACAGCACCCCT 3042
|| ||| ||||| || | |||| || |||| |||| || ||||| ||
Sbjct 2637 AT-------CAA--AGGAGAATCCACAGACATGTCAGTCTACCTTGGATATAGCACTCCA 2587
Query 3043 TGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGA 3102
|||| ||| ||||||| || |||||||| || |||| | | |||||||| |
Sbjct 2586 TGGGCCTATCTTGACTTCAATAGATTCCAATGTCACTGAAGCTCCTGAGACTGGCAATGC 2527
Query 3103 CTCATTAACAACAACTGGGGATTCCGGCCCAAGAAACT-CAGCTTCAAGCTCTTCAACAT 3161
||||| ||| ||| |||| | | |||| || || ||| |||| | ||||||||
Sbjct 2526 CTCATCGGCAATTACTAGGGA-CCACGACCAAAAAGCTGCAGAATCAAAATATTCAACAT 2468
Query 3162 CCAAGTTAGAGGGGTCACGCAGAACGATGGCACGACGACTATTGCCAATAA 3212
|||||||| | |||| | ||| | |||||| || |||||||| ||
Sbjct 2467 CCAAGTTAAGGAGGTCGCAGAGACAGCAAGCACGAAAACAATTGCCAACAA 2417
>seq91248
Length=32913
Score = 109 bits (120), Expect = 2e-20
Identities = 124/164 (76%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 1299 AACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATC 1358
|||||||| ||| ||| || || || || || || || ||||||||||| || || ||
Sbjct 7997 AACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGAGGCTATT 8056
Query 1359 GCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAAC 1418
||||| || | || ||||| |||| || | |||||| ||||| |||||| |||| ||
Sbjct 8057 GCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTT-CCTTTAAT 8114
Query 1419 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1462
|| || || ||||| ||||| || |||| || |||||| | |||
Sbjct 8115 GACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGAT 8158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14982073416815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |