Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq65713 127 6e-26 seq91248 109 2e-20 >seq65713 Length=16701 Score = 127 bits (140), Expect = 6e-26 Identities = 242/351 (69%), Gaps = 14/351 (4%) Strand=Plus/Minus Query 2866 GGAGTGGGTAATTCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTC 2925 ||||||||| | |||||||||||||||||| |||| ||||||| ||| | | || Sbjct 2757 GGAGTGGGTTAGATCTCAGGAAATTGGCATTGTAATTCACAATGGCAAGGCAATATGGTT 2698 Query 2926 ATCACCACCAGCACCAGAACCTGGGCCCTGCCCACTTACAACAACCATCTCTACAAGCAA 2985 | ||||| |||| | |||||| ||||| | || |||||||| | ||||| ||| Sbjct 2697 ACCACCAAGTCAACCACAGCCTGGGTACTGCCTTCCTATGACAACCATTTATACAAACAA 2638 Query 2986 ATCTCCAGCCAATCAGGAGCTTCAAACGACA-ACCA--CTACTTTGGCTACAGCACCCCT 3042 || ||| ||||| || | |||| || |||| |||| || ||||| || Sbjct 2637 AT-------CAA--AGGAGAATCCACAGACATGTCAGTCTACCTTGGATATAGCACTCCA 2587 Query 3043 TGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGA 3102 |||| ||| ||||||| || |||||||| || |||| | | |||||||| | Sbjct 2586 TGGGCCTATCTTGACTTCAATAGATTCCAATGTCACTGAAGCTCCTGAGACTGGCAATGC 2527 Query 3103 CTCATTAACAACAACTGGGGATTCCGGCCCAAGAAACT-CAGCTTCAAGCTCTTCAACAT 3161 ||||| ||| ||| |||| | | |||| || || ||| |||| | |||||||| Sbjct 2526 CTCATCGGCAATTACTAGGGA-CCACGACCAAAAAGCTGCAGAATCAAAATATTCAACAT 2468 Query 3162 CCAAGTTAGAGGGGTCACGCAGAACGATGGCACGACGACTATTGCCAATAA 3212 |||||||| | |||| | ||| | |||||| || |||||||| || Sbjct 2467 CCAAGTTAAGGAGGTCGCAGAGACAGCAAGCACGAAAACAATTGCCAACAA 2417 >seq91248 Length=32913 Score = 109 bits (120), Expect = 2e-20 Identities = 124/164 (76%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 1299 AACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATC 1358 |||||||| ||| ||| || || || || || || || ||||||||||| || || || Sbjct 7997 AACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGAGGCTATT 8056 Query 1359 GCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAAC 1418 ||||| || | || ||||| |||| || | |||||| ||||| |||||| |||| || Sbjct 8057 GCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTT-CCTTTAAT 8114 Query 1419 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1462 || || || ||||| ||||| || |||| || |||||| | ||| Sbjct 8115 GACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGAT 8158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14982073416815