Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq91248 109 2e-20 >seq91248 Length=32913 Score = 109 bits (120), Expect = 2e-20 Identities = 124/164 (76%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 1353 AACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATC 1412 |||||||| ||| ||| || || || || || || || ||||||||||| || || || Sbjct 7997 AACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGAGGCTATT 8056 Query 1413 GCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGAGAACTTTCCGTTCAAC 1472 ||||| || | || ||||| |||| || | |||||| ||||| |||||||| || || Sbjct 8057 GCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTTCC-TTTAAT 8114 Query 1473 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1516 || || || ||||| ||||| || |||| || |||||| | ||| Sbjct 8115 GACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGAT 8158 Score = 78.8 bits (86), Expect = 3e-11 Identities = 120/169 (71%), Gaps = 8/169 (5%) Strand=Plus/Plus Query 3042 CACCTACAACGGATTCTCCACCCCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCA 3101 ||||||| ||||| | || ||| |||| |||| ||||||||||| | ||||| ||| Sbjct 9747 CACCTACCTCGGATACAGCATCCCATGGGCATACATTGACTTCAACAGATTCCAGTGCTG 9806 Query 3102 CTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGCATGCGACCCAAAGC 3161 || || | |||||||| | ||||||||| ||| ||| | | | | | ||||| Sbjct 9807 CTGGAGTGCAAGGGACTGGCAACAACTCATCAATAACTACTTTGCCCT-CCATCCAAAAA 9865 Query 3162 CATGC-GGGTCAAAATCTTC------AACATCCAGGTCAAGGAGGTCAC 3203 ||| | |||||||||||| ||| |||| | ||||||||||| Sbjct 9866 GCTGCTGTGTCAAAATCTTCCAAGTTAACTTCCAAATTAAGGAGGTCAC 9914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15113018846380