Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_002077.1
Length=4718
Score E
Sequences producing significant alignments: (Bits) Value
seq91248 118 3e-23
seq65713 77.0 1e-10
>seq91248
Length=32913
Score = 118 bits (130), Expect = 3e-23
Identities = 126/164 (77%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 1316 AACACCATCTGGCTGTTTGGGCCGGCCACCACGGGCAAGACCAACATCGCGGAAGCCATC 1375
|||||||| ||| | | || || || ||||| || |||||||||||||| || || ||
Sbjct 7997 AACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGAGGCTATT 8056
Query 1376 GCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAAT 1435
||||| || | || ||||| |||| || | |||||| ||||| |||||| |||| |||
Sbjct 8057 GCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTT-CCTTTAAT 8114
Query 1436 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1479
|| || || ||||| ||||| || |||| || |||||| | |||
Sbjct 8115 GACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGAT 8158
>seq65713
Length=16701
Score = 77.0 bits (84), Expect = 1e-10
Identities = 111/157 (71%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 3038 CTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTT 3097
|||| | || || ||||| || |||| ||| |||| ||||| |||||||| || ||||
Sbjct 2608 CTACCTTGGATATAGCACTCCATGGGCCTATCTTGACTTCAATAGATTCCAATGTCACTG 2549
Query 3098 TTCACCACGTGACTGGCAGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACT 3157
| | |||||||| | |||||| ||| | | |||| || || || ||
Sbjct 2548 AAGCTCCTGAGACTGGCAATGCCTCATCGGCAATTACTAGGGACCACGACCAAAAAGCTG 2489
Query 3158 CAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTC 3194
|| ||||| | |||||||||||||| |||||||||
Sbjct 2488 CAGAATCAAAATATTCAACATCCAAGTTAAGGAGGTC 2452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14956523089095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |