Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq91248 118 3e-23 seq65713 77.0 1e-10 >seq91248 Length=32913 Score = 118 bits (130), Expect = 3e-23 Identities = 126/164 (77%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 1316 AACACCATCTGGCTGTTTGGGCCGGCCACCACGGGCAAGACCAACATCGCGGAAGCCATC 1375 |||||||| ||| | | || || || ||||| || |||||||||||||| || || || Sbjct 7997 AACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGAGGCTATT 8056 Query 1376 GCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAAT 1435 ||||| || | || ||||| |||| || | |||||| ||||| |||||| |||| ||| Sbjct 8057 GCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTT-CCTTTAAT 8114 Query 1436 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1479 || || || ||||| ||||| || |||| || |||||| | ||| Sbjct 8115 GACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGAT 8158 >seq65713 Length=16701 Score = 77.0 bits (84), Expect = 1e-10 Identities = 111/157 (71%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 3038 CTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTT 3097 |||| | || || ||||| || |||| ||| |||| ||||| |||||||| || |||| Sbjct 2608 CTACCTTGGATATAGCACTCCATGGGCCTATCTTGACTTCAATAGATTCCAATGTCACTG 2549 Query 3098 TTCACCACGTGACTGGCAGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACT 3157 | | |||||||| | |||||| ||| | | |||| || || || || Sbjct 2548 AAGCTCCTGAGACTGGCAATGCCTCATCGGCAATTACTAGGGACCACGACCAAAAAGCTG 2489 Query 3158 CAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTC 3194 || ||||| | |||||||||||||| ||||||||| Sbjct 2488 CAGAATCAAAATATTCAACATCCAAGTTAAGGAGGTC 2452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14956523089095