Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_004828.1
Length=4694
Score E
Sequences producing significant alignments: (Bits) Value
seq65713 143 8e-31
seq91248 138 3e-29
>seq65713
Length=16701
Score = 143 bits (158), Expect = 8e-31
Identities = 232/335 (69%), Gaps = 8/335 (2%)
Strand=Plus/Minus
Query 1223 GAAACACGCTGTGGCTGTTCGGACATGCGACCACCGGCAAGACCAACATCGCGGAGGCTA 1282
||||||| ||||| | | ||||||| |||| || |||||||||||| | |||||||
Sbjct 4386 GAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAACATCACAGAGGCTA 4327
Query 1283 TTGCCCATGCTGTGCCGTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCA 1342
|||||||||||||| ||| ||| | | | || || | |||||||| || |
Sbjct 4326 TTGCCCATGCTGTG--------TGGCTGCATAACCCAGAGTAATGGAAACTTTCCTTTTA 4275
Query 1343 ACGACTGCGTCGAAAAAATGATTATCTGGTGGGAGGAGGGCAAAATGACCGCCAAAGTGG 1402
| |||| || ||||||||||| |||| ||||||||| |||||||| | || |
Sbjct 4274 ATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATGACTAATGATGTTG 4215
Query 1403 TGGAAACAGCCAAGGCGATTCTGGGAGGATCTCGGGTGAGAGTGGACCAAAAATGCAAAG 1462
|| | | || ||||| || |||| | |||| | || || || || |||| |||
Sbjct 4214 TGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTGATCAGGAATGTAAAT 4155
Query 1463 CTTCGGTTCCGATCGAACCGACGCCGGTCATTATTACCAGTAACACCAACATGTGTTATG 1522
| || | | ||||| || || || |||||||||||||||| | ||||| ||
Sbjct 4154 GGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACATTGATATGTGGATTG 4095
Query 1523 TCATCGACGGGAACACGACCACGTTCGAGCATAAG 1557
| | || ||||||| || || || || ||||||
Sbjct 4094 TAGTGGATGGGAACAGTACAACTTTTGAACATAAG 4060
>seq91248
Length=32913
Score = 138 bits (152), Expect = 3e-29
Identities = 131/165 (79%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 1218 CAAGCGAAACACGCTGTGGCTGTTCGGACATGCGACCACCGGCAAGACCAACATCGCGGA 1277
||| | |||||| | ||| | | ||||| ||| ||||| || |||||||||||||| ||
Sbjct 7990 CAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGA 8049
Query 1278 GGCTATTGCCCATGCTGTGCCGTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCC 1337
||||||||||||||||| || |||||| | || |||| |||||| || || ||||||||
Sbjct 8050 GGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTTCC 8108
Query 1338 GTTCAACGACTGCGTCGAAAAAATGATTATCTGGTGGGAGGAGGG 1382
|| || ||||| || || |||||| | || |||| || ||||||
Sbjct 8109 -TTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGG 8152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14879872105935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |