Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq91248 223 1e-54 seq65713 212 2e-51 >seq91248 Length=32913 Score = 223 bits (246), Expect = 1e-54 Identities = 285/391 (73%), Gaps = 14/391 (4%) Strand=Plus/Plus Query 1518 GAGAATTCAACAAAAGAAATGCCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCA 1577 |||| ||||||||| ||| |||||||| ||||||||||||| ||||| || ||||||| Sbjct 7980 GAGAGTTCAACAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCA 8039 Query 1578 ACATAGCCGAGGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATG 1637 |||| || ||||||||||||||||||| | |||||| ||||||||| ||||||||||| Sbjct 8040 ACATCGCAGAGGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATG 8099 Query 1638 AGAACTTCCCATTTAATGACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAA 1697 | ||||| || ||||||||||| || || |||||| | || |||| || |||||| | | Sbjct 8100 A-AACTTTCC-TTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGA 8157 Query 1698 TGACCAATAAAGTAGTGGAATCCGCAAAAGCGATACTggggg-----------ggTCTGC 1746 | |||||||| |||||||| | ||||| | | |||||| |||| || Sbjct 8158 TAGTTAATAAAGTTGTGGAATCTGTTAAAGCCAAAATGGGGGTGGGGTGGGGTGGTCAGC 8217 Query 1747 TGTACGAGTTGATCAAAAGTGTAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATAAT 1806 | | || | ||||||| ||||| | ||||| || ||||| || |||||||| || Sbjct 8218 CAT-CCAGGTTATCAAAAATGTAAAGTATCTGTACAAATAGAACCCACGCCTGTAATCAT 8276 Query 1807 TACCAGTAATACTGATATGTGCATGATTGTGGATGGAAATTCTACTACAATGGAACACAG 1866 || | ||| |||| | || | | | || ||||| || | | || | || |||| Sbjct 8277 AACAAATAAAACTGGTGTGAGTTTAGTAGTAGATGGCAACTGCCCAACTTTTGAGCACAA 8336 Query 1867 AATTCCTTTGGAGGAAAGAATGTTCCAGATT 1897 ||| | ||||| | |||||| | |||| Sbjct 8337 GGAGCCTCTCGAGGAGAAAATGTTTCTGATT 8367 >seq65713 Length=16701 Score = 212 bits (234), Expect = 2e-51 Identities = 264/361 (73%), Gaps = 12/361 (3%) Strand=Plus/Minus Query 1528 CAAAAGAAATGCCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGA 1587 ||||||||| |||| ||| || || ||| ||| |||| || ||||||||||| | || Sbjct 4391 CAAAAGAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAACATCACAGA 4332 Query 1588 GGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCC 1647 |||||||||||||||||| |||||| | | | || ||||| ||||| || Sbjct 4331 GGCTATTGCCCATGCTGTG--------TGGCTGCATAACCCAGAGTAATGGAAACTTTCC 4280 Query 1648 ATTTAATGACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAA 1707 |||||||||| ||||||||| |||| |||| ||||||||| |||||||| ||| | Sbjct 4279 TTTTAATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATGACTAATGA 4220 Query 1708 AGTAGTGGAATCCGCAAAAGCGATACTgggggggTCTGCTGTACGAGTTGATCAAAAGTG 1767 || ||| | || ||||| || | |||||| ||||| || | |||||||| | || Sbjct 4219 TGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTGATCAGGAATG 4160 Query 1768 TAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATAATTACCAGTAATACTGATATGTG 1827 ||| || |||| | |||||| |||||||| || ||||||||||| | ||||||||| Sbjct 4159 TAAATGGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACATTGATATGTG 4100 Query 1828 CATGATTGTGGATGGAAATTCTACTACAATGGAACACA--GAATTCCTTTGGAGGAAAGA 1885 || | |||||||| || ||| || | ||||| | ||| |||| || |||||| Sbjct 4099 GATTGTAGTGGATGGGAACAGTACAACTTTTGAACATAAGGAA--ACTTTAGAAGAAAGA 4042 Query 1886 A 1886 | Sbjct 4041 A 4041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16278752548605