Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_006147.2
Length=5132
Score E
Sequences producing significant alignments: (Bits) Value
seq91248 223 1e-54
seq65713 212 2e-51
>seq91248
Length=32913
Score = 223 bits (246), Expect = 1e-54
Identities = 285/391 (73%), Gaps = 14/391 (4%)
Strand=Plus/Plus
Query 1518 GAGAATTCAACAAAAGAAATGCCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCA 1577
|||| ||||||||| ||| |||||||| ||||||||||||| ||||| || |||||||
Sbjct 7980 GAGAGTTCAACAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCA 8039
Query 1578 ACATAGCCGAGGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATG 1637
|||| || ||||||||||||||||||| | |||||| ||||||||| |||||||||||
Sbjct 8040 ACATCGCAGAGGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATG 8099
Query 1638 AGAACTTCCCATTTAATGACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAA 1697
| ||||| || ||||||||||| || || |||||| | || |||| || |||||| | |
Sbjct 8100 A-AACTTTCC-TTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGA 8157
Query 1698 TGACCAATAAAGTAGTGGAATCCGCAAAAGCGATACTggggg-----------ggTCTGC 1746
| |||||||| |||||||| | ||||| | | |||||| |||| ||
Sbjct 8158 TAGTTAATAAAGTTGTGGAATCTGTTAAAGCCAAAATGGGGGTGGGGTGGGGTGGTCAGC 8217
Query 1747 TGTACGAGTTGATCAAAAGTGTAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATAAT 1806
| | || | ||||||| ||||| | ||||| || ||||| || |||||||| ||
Sbjct 8218 CAT-CCAGGTTATCAAAAATGTAAAGTATCTGTACAAATAGAACCCACGCCTGTAATCAT 8276
Query 1807 TACCAGTAATACTGATATGTGCATGATTGTGGATGGAAATTCTACTACAATGGAACACAG 1866
|| | ||| |||| | || | | | || ||||| || | | || | || ||||
Sbjct 8277 AACAAATAAAACTGGTGTGAGTTTAGTAGTAGATGGCAACTGCCCAACTTTTGAGCACAA 8336
Query 1867 AATTCCTTTGGAGGAAAGAATGTTCCAGATT 1897
||| | ||||| | |||||| | ||||
Sbjct 8337 GGAGCCTCTCGAGGAGAAAATGTTTCTGATT 8367
>seq65713
Length=16701
Score = 212 bits (234), Expect = 2e-51
Identities = 264/361 (73%), Gaps = 12/361 (3%)
Strand=Plus/Minus
Query 1528 CAAAAGAAATGCCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGA 1587
||||||||| |||| ||| || || ||| ||| |||| || ||||||||||| | ||
Sbjct 4391 CAAAAGAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAACATCACAGA 4332
Query 1588 GGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCC 1647
|||||||||||||||||| |||||| | | | || ||||| ||||| ||
Sbjct 4331 GGCTATTGCCCATGCTGTG--------TGGCTGCATAACCCAGAGTAATGGAAACTTTCC 4280
Query 1648 ATTTAATGACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAA 1707
|||||||||| ||||||||| |||| |||| ||||||||| |||||||| ||| |
Sbjct 4279 TTTTAATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATGACTAATGA 4220
Query 1708 AGTAGTGGAATCCGCAAAAGCGATACTgggggggTCTGCTGTACGAGTTGATCAAAAGTG 1767
|| ||| | || ||||| || | |||||| ||||| || | |||||||| | ||
Sbjct 4219 TGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTGATCAGGAATG 4160
Query 1768 TAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATAATTACCAGTAATACTGATATGTG 1827
||| || |||| | |||||| |||||||| || ||||||||||| | |||||||||
Sbjct 4159 TAAATGGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACATTGATATGTG 4100
Query 1828 CATGATTGTGGATGGAAATTCTACTACAATGGAACACA--GAATTCCTTTGGAGGAAAGA 1885
|| | |||||||| || ||| || | ||||| | ||| |||| || ||||||
Sbjct 4099 GATTGTAGTGGATGGGAACAGTACAACTTTTGAACATAAGGAA--ACTTTAGAAGAAAGA 4042
Query 1886 A 1886
|
Sbjct 4041 A 4041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16278752548605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |