Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_006152.1
Length=4642
Score E
Sequences producing significant alignments: (Bits) Value
seq91248 176 1e-40
seq65713 145 2e-31
>seq91248
Length=32913
Score = 176 bits (194), Expect = 1e-40
Identities = 266/374 (71%), Gaps = 22/374 (6%)
Strand=Plus/Plus
Query 1316 TTCAACAAGAGGAACACCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACATC 1375
|||||||| |||||| | ||| |||||||||| || || || || ||||||||||||
Sbjct 7985 TTCAACAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATC 8044
Query 1376 GCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAAC 1435
|| ||||| || ||||| ||| || || || |||| || | |||||| |||| ||||
Sbjct 8045 GCAGAGGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATG-AAAC 8103
Query 1436 TTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGACC 1495
||| |||||||||||||||||||||||||| | ||||||| || |||||| | |||
Sbjct 8104 TTT-CCTTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGATAGTT 8162
Query 1496 AACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGG-----------GCTCAAAGGTGC 1544
|| || || || ||||| | || |||| |||||| | ||| | |
Sbjct 8163 AATAAAGTTGTGGAATCTGTTAAAGCCAAAATGGGGGTGGGGTGGGGTGGTCAGCCATCC 8222
Query 1545 GGGTCGATCAGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTT 1604
||| |||| ||||||||| ||||| ||||| || | || ||||| || |||
Sbjct 8223 AGGT-TATCAAAAATGTAAAGTATCTGTACAAATAGAACCCACGCCTGTAATCATAA--- 8278
Query 1605 CCAATACAAACATGTGTG----TGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAG 1660
| |||| |||| ||||| | || || ||||| || | | | || ||||| ||| ||
Sbjct 8279 CAAATA-AAACTGGTGTGAGTTTAGTAGTAGATGGCAACTGCCCAACTTTTGAGCACAAG 8337
Query 1661 CAGCCGCTGGAGGA 1674
|||| || |||||
Sbjct 8338 GAGCCTCTCGAGGA 8351
>seq65713
Length=16701
Score = 145 bits (160), Expect = 2e-31
Identities = 233/336 (69%), Gaps = 8/336 (2%)
Strand=Plus/Minus
Query 1321 CAAGAGGAACACCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACATCGCGGA 1380
||| || |||||| | ||| || || ||| || | || || |||||||||||| | ||
Sbjct 4391 CAAAAGAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAACATCACAGA 4332
Query 1381 GGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAACTTTCC 1440
||| || ||||| ||||| |||||| | | | || |||| |||||||||
Sbjct 4331 GGCTATTGCCCATGCTGTGT--------GGCTGCATAACCCAGAGTAATGGAAACTTTCC 4280
Query 1441 CTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGACCAACAA 1500
|||||||||| | ||| |||||| | ||||||| ||||||||| || ||||| || |
Sbjct 4279 TTTTAATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATGACTAATGA 4220
Query 1501 GGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGTGCGGGTCGATCAGAAATG 1560
|| || | || || ||||| | |||||| || | |||| |||||| ||||
Sbjct 4219 TGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTGATCAGGAATG 4160
Query 1561 TAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTTCCAATACAAACATGTG 1620
||||| |||| |||| ||| | || ||||| ||| | || || | | |||||
Sbjct 4159 TAAATGGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACATTGATATGTG 4100
Query 1621 TGTGGTGGTGGATGGGAATTCCACGACCTTTGAACA 1656
| || ||||||||||| || || ||||||||
Sbjct 4099 GATTGTAGTGGATGGGAACAGTACAACTTTTGAACA 4064
Score = 114 bits (126), Expect = 4e-22
Identities = 309/471 (66%), Gaps = 11/471 (2%)
Strand=Plus/Minus
Query 2834 GGAGTGGGCAATGCCTCGGGAGATTGGCATTGCGATTCCACGTGGATGGGGGACAGAGTC 2893
|||||||| | ||| ||| |||||||||| |||| ||| || | | ||
Sbjct 2757 GGAGTGGGTTAGATCTCAGGAAATTGGCATTGTAATTCACAATGGCAAGGCAATATGGTT 2698
Query 2894 GTCACCAAGTCCACCCGAACCTGGGTGCTGCCCAGCTACAACAACCACCAGTACCGAGAG 2953
||||||||| ||| | ||||||| ||||| ||| ||||||| ||| | |
Sbjct 2697 ACCACCAAGTCAACCACAGCCTGGGTACTGCCTTCCTATGACAACCATTTATACAAACAA 2638
Query 2954 ATCAAAAGCGGCTCCGTCGACGGAAGCAACGCCAACGCCTACTTTGGATACAGCACCCCC 3013
|||||| | | ||| ||| | | || | |||| ||||||| ||||| ||
Sbjct 2637 ATCAAAGGAGAATCCACAGAC-------ATGTCA--GTCTACCTTGGATATAGCACTCCA 2587
Query 3014 TGGGGGTACTTTGACTTTAACCGCTTCCACAGCCACTGGAGCCCCCGAGACTGGCAAAGA 3073
|||| || ||||||| || | ||||| | ||||| ||| || ||||||||||| |
Sbjct 2586 TGGGCCTATCTTGACTTCAATAGATTCCAATGTCACTGAAGCTCCTGAGACTGGCAATGC 2527
Query 3074 CTCATCAACAACTACTGGGGCTTCAGACCCCGGTCCCTCAGAGTCAAAATCTTCAACATT 3133
|||||| ||| |||| ||| |||| | |||| ||||||| ||||||||
Sbjct 2526 CTCATCGGCAATTACTAGGGACCACGACCAAAAAGCTGCAGAATCAAAATATTCAACATC 2467
Query 3134 CAAGTCAAAGAGGTCACGGTG-CAGGACTCCACCACNNNNATCGCCAACAACCTCACCTC 3192
||||| || |||||| | | | ||| | ||| | || |||||||| | | ||
Sbjct 2466 CAAGTTAAGGAGGTCGCAGAGACAGCA-AGCACGAAAACAATTGCCAACAATTTAGCATC 2408
Query 3193 CACCGTCCAAGTGTTTACGGACGACGACTACCAGCTGCCCTACGTCGTCGGCAACGGGAC 3252
||| || | | ||| | || ||| || || ||||| || ||| | || || | ||
Sbjct 2407 CACAATCTAGATATTTTCAGATGACACATATCAACTGCCTTATGTCATTGGTAATGTTAC 2348
Query 3253 CGAGGGATGCCTGCCGGCCTTCCCTCCGCAGGTCTTTACGCTGCCGCAGTA 3303
|| |||||| |||| ||| || | ||||||| ||| || || ||
Sbjct 2347 AGAAGGATGCTTGCCAAACTTTCCAGGCGATGTCTTTATGCTTCCTCAATA 2297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14713794975755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |