Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_006260.1
Length=4721
Score E
Sequences producing significant alignments: (Bits) Value
seq91248 109 2e-20
seq65713 104 7e-19
>seq91248
Length=32913
Score = 109 bits (120), Expect = 2e-20
Identities = 124/164 (76%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 1315 AACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATTGCGGAAGCCATC 1374
|||||||| ||| | | || || || ||||| || ||||||||||| || || || ||
Sbjct 7997 AACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGAGGCTATT 8056
Query 1375 GCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAAC 1434
||||| || | || ||||| |||| || | |||||| ||||| |||||| |||| ||
Sbjct 8057 GCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTT-CCTTTAAT 8114
Query 1435 GATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1478
|| || || ||||| ||||| || |||| || |||||| | |||
Sbjct 8115 GACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGAT 8158
Score = 87.8 bits (96), Expect = 5e-14
Identities = 122/169 (72%), Gaps = 8/169 (5%)
Strand=Plus/Plus
Query 3037 CACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCA 3096
||||||| |||| ||||||| ||| |||| || ||||||| ||||||||||| |||
Sbjct 9747 CACCTACCTCGGATACAGCATCCCATGGGCATACATTGACTTCAACAGATTCCAGTGCTG 9806
Query 3097 CTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAA 3156
|| || | |||||||| | ||||||||| ||| ||| | ||| |||| ||
Sbjct 9807 CTGGAGTGCAAGGGACTGGCAACAACTCATCAATAACTACTTTGCCCTCC-ATCCAAAAA 9865
Query 3157 GCTGCGGT-TCAAGCTCTTC------AACATCCAGGTCAAGGAGGTCAC 3198
||||| || |||| ||||| ||| |||| | |||||||||||
Sbjct 9866 GCTGCTGTGTCAAAATCTTCCAAGTTAACTTCCAAATTAAGGAGGTCAC 9914
>seq65713
Length=16701
Score = 104 bits (114), Expect = 7e-19
Identities = 218/319 (68%), Gaps = 17/319 (5%)
Strand=Plus/Minus
Query 2882 GGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAGAGTC 2941
||||||||| | |||||||||||||||||| |||| ||||| ||| | | ||
Sbjct 2757 GGAGTGGGTTAGATCTCAGGAAATTGGCATTGTAATTCACAATGGCAAGGCAATATGGT- 2699
Query 2942 ATTACCACCAGC---ACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACAAG 2998
|||||||| ||| | |||||| ||||| |||| ||||||| | |||||
Sbjct 2698 --TACCACCAAGTCAACCACAGCCTGGGTACTGCCTTCCTATGACAACCATTTATACAAA 2641
Query 2999 CAAATCTCCAGTGAAACTGCAGGTAGTACCAACGACAACACCTACTTCGGCTACAGCACC 3058
|||||| | ||| | ||| || | | || |||| | || || |||||
Sbjct 2640 CAAATCAAAGGAGAATCCACAG-----AC--ATGTCAGT--CTACCTTGGATATAGCACT 2590
Query 3059 CCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAG 3118
|| |||| ||| ||||||| || |||||||| || |||| | | ||||||||
Sbjct 2589 CCATGGGCCTATCTTGACTTCAATAGATTCCAATGTCACTGAAGCTCCTGAGACTGGCAA 2530
Query 3119 CGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAAGCTGCGGT-TCAAGCTCTTCAA 3177
| |||||| ||| ||| |||| || || || ||||||| | |||| | |||||
Sbjct 2529 TGCCTCATCGGCAATTACTAGGGACCACGACCAAA-AAGCTGCAGAATCAAAATATTCAA 2471
Query 3178 CATCCAGGTCAAGGAGGTC 3196
|||||| || |||||||||
Sbjct 2470 CATCCAAGTTAAGGAGGTC 2452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14966104461990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |