Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_006263.1
Length=4682
Score E
Sequences producing significant alignments: (Bits) Value
seq91248 136 1e-28
seq65713 125 2e-25
>seq91248
Length=32913
Score = 136 bits (150), Expect = 1e-28
Identities = 257/374 (69%), Gaps = 12/374 (3%)
Strand=Plus/Plus
Query 1218 CAAGCGAAACACGCTGTGGCTGTTCGGACCTGCGACCACCGGCAAGACCAACATCGCGGA 1277
||| | |||||| | ||| | | ||||||||| ||||| || |||||||||||||| ||
Sbjct 7990 CAAACAAAACACCATATGGTTCTACGGACCTGCAACCACAGGGAAGACCAACATCGCAGA 8049
Query 1278 GGCTATTGCCCATGCTGTGCCGTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCC 1337
||||||||||||||||| || |||||| | || |||| |||||| || || ||||||||
Sbjct 8050 GGCTATTGCCCATGCTGGGCTTTTCTATAGCTGTGTTAGCTGGACTAATGA-AACTTTCC 8108
Query 1338 GTTCAACGACTGCGTCGAAAAGATGATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAA 1397
|| || ||||| || || || ||| | || |||| || ||||| | || ||
Sbjct 8109 -TTTAATGACTGTGTGGACAAAATGGTAATTTGGTAGGTGGAGGGTACGATAGTTAATAA 8167
Query 1398 GGTGGTGGAAACGGCTAAAGCGATTCTGGGAG-GATCTCGGGTG---AG------AGTGG 1447
|| |||||| | | |||||| | |||| | | | ||||| || ||
Sbjct 8168 AGTTGTGGAATCTGTTAAAGCCAAAATGGGGGTGGGGTGGGGTGGTCAGCCATCCAGGTT 8227
Query 1448 ACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCGACGCCGGTCATTATTACCAGTAACA 1507
| |||||||| |||| || || | || ||||| ||||| || || || || | ||| |
Sbjct 8228 ATCAAAAATGTAAAGTATCTGTACAAATAGAACCCACGCCTGTAATCATAACAAATAAAA 8287
Query 1508 CCAACATGTGTTATGTCATCGACGGGAACACGACTACGTTCGAGCATAAGCAGCCGTTGG 1567
| || ||| || | || || ||| | || || ||||| ||| |||| | |
Sbjct 8288 CTGGTGTGAGTTTAGTAGTAGATGGCAACTGCCCAACTTTTGAGCACAAGGAGCCTCTCG 8347
Query 1568 AGGACAGGATGTTT 1581
|||| | ||||||
Sbjct 8348 AGGAGAAAATGTTT 8361
>seq65713
Length=16701
Score = 125 bits (138), Expect = 2e-25
Identities = 228/335 (68%), Gaps = 8/335 (2%)
Strand=Plus/Minus
Query 1223 GAAACACGCTGTGGCTGTTCGGACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTA 1282
||||||| ||||| | | ||| ||| |||| || |||||||||||| | |||||||
Sbjct 4386 GAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAACATCACAGAGGCTA 4327
Query 1283 TTGCCCATGCTGTGCCGTTCTATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCA 1342
|||||||||||||| ||| ||| | | | || || | |||||||| || |
Sbjct 4326 TTGCCCATGCTGTG--------TGGCTGCATAACCCAGAGTAATGGAAACTTTCCTTTTA 4275
Query 1343 ACGACTGCGTCGAAAAGATGATTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGG 1402
| |||| || || |||||||| |||| ||| ||||| |||||||| | || |
Sbjct 4274 ATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATGACTAATGATGTTG 4215
Query 1403 TGGAAACGGCTAAAGCGATTCTGGGAGGATCTCGGGTGAGAGTGGACCAAAAATGCAAAG 1462
|| | | || || || || |||| | |||| | || || || || |||| |||
Sbjct 4214 TGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTGATCAGGAATGTAAAT 4155
Query 1463 CTTCGGTTCCGATCGAACCGACGCCGGTCATTATTACCAGTAACACCAACATGTGTTATG 1522
| || | | ||||| || || || |||||||||||||||| | ||||| ||
Sbjct 4154 GGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACATTGATATGTGGATTG 4095
Query 1523 TCATCGACGGGAACACGACTACGTTCGAGCATAAG 1557
| | || ||||||| || || || || ||||||
Sbjct 4094 TAGTGGATGGGAACAGTACAACTTTTGAACATAAG 4060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14841546614355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |