Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_015586.1 Length=5819 Score E Sequences producing significant alignments: (Bits) Value seq131851 971 0.0 seq116276 111 6e-21 >seq131851 Length=40801 Score = 971 bits (1076), Expect = 0.0 Identities = 767/917 (84%), Gaps = 2/917 (0%) Strand=Plus/Plus Query 1 ATGGTCGGTGATCGCGCGGTGCTGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGGAGTC 60 |||| || |||||||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct 28046 ATGGCCGTTGATCGCGCGGTGCTGGCGGAGTCGGGACTCCCCGCGTCTAACAGGGGAGTC 28105 Query 61 AGTGAATTCAGGAACCCCGAGGGAACCCTGACGGTCGGCATTGACTGGTTCTCCGCTTCC 120 ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct 28106 AGTGAATTCAGGAACGCCGATGGAACCCTGACGGTCGGCATTGACTGGTTTTCCGCTTCG 28165 Query 121 ATCGATCTGCGCGCAGCGCTGGACGAGGTTGCGTTCCGTGATGGCGACAGTTTCGAAGAG 180 | || || || | || |||| | || ||||| ||||||||| || |||||| Sbjct 28166 GTGGACATGTTTGCGGTCCTCAACGAACTCGCCTTCCGCGATGGCGACTCTTACGAAGAA 28225 Query 181 GTCCGCCAGTGGATCGAGTTCTCCCCGGACAATGCCCGCATTGCGGCCTTGCAGGTGTTC 240 ||||| |||||||| || ||| | | || || || ||| | | || |||||| ||||| Sbjct 28226 GTCCGGCAGTGGATTGATTTCAGCGCTGATAACGCACGCGTGGTCGCATTGCAGATGTTC 28285 Query 241 TGCTGGTTCTTCGCCGGTCTGGGTCTTGAACTGGATGAAACGGCCGGCGGCGGCCGCTTC 300 ||||||||||||||||| || || |||||||||||||| |||||||| || || |||||| Sbjct 28286 TGCTGGTTCTTCGCCGGGCTTGGCCTTGAACTGGATGAGACGGCCGGGGGAGGGCGCTTC 28345 Query 301 TACACGTGGCGAATCAAGATCATCGACGCGGCCAAGAAGTTCGTCGGGATGATCGAACTG 360 ||| |||||| ||||||||||| |||| | |||||||||||||| ||||| ||||| Sbjct 28346 TACCTGTGGCGCGTCAAGATCATCAACGCCGAAAAGAAGTTCGTCGGCATGATTGAACTC 28405 Query 361 GGTGGCGAAAAGTGCCGCCGCGCAGATGGTACGTATACCGCCCGCATCGAGCTAACCGGT 420 || || || || |||||||| ||||| || ||||||||||| || ||||| | |||||| Sbjct 28406 GGCGGTGAGAACTGCCGCCGTGCAGACGGAACGTATACCGCTCGAATCGAATTGACCGGT 28465 Query 421 GATGGATGCAAGGCGATTAG-CGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGAGCT 479 || ||||||| ||| | ||| |||||||||||||||||||||| |||||||||||||||| Sbjct 28466 GACGGATGCAGGGC-AGTAGCCGCAGCGCGCTGCGGCCATGCGAAGCGGTGGCTGGAGCT 28524 Query 480 TCGAGCGAAGCTCGAAAGCTGCGCCGGGAGGATCACCCGTGTCGATGTGTGCGCCGATGA 539 ||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| Sbjct 28525 TCGAGCGAAGCTCGAAAGCTGCGGCGGCAGGATTACCCGTGTCGACGTGTGCGCCGATGA 28584 Query 540 CCTGGTGGGCGATTACCCGTTGCGCATGGCACAGAAGTGGTACGCCAATGGCGACTTCGA 599 | || ||||| | ||||| |||||| |||||||||||||||||| | ||||| ||| | Sbjct 28585 CTTGATGGGCAAGTACCCATTGCGCCTGGCACAGAAGTGGTACGAGGAAGGCGAGTTCAA 28644 Query 600 CAACCGTGGTCAGCGCCCCAAGGCGCAGCTGGTGGACGACTACGACAGCGGCGACGGCAA 659 ||| || |||||||| || || ||| ||||| | || ||||||||||||||||||||||| Sbjct 28645 CAATCGCGGTCAGCGTCCGAAAGCGGAGCTGATAGATGACTACGACAGCGGCGACGGCAA 28704 Query 660 GACGTTCTATGTGGGCGGCAAGAAGTCGGAGAAGCAACTGCGCGTCTACGAGAAGGGCAG 719 |||| |||| |||||||| ||||||||||| ||||| ||||||||||| || |||||||| Sbjct 28705 GACGCTCTACGTGGGCGGAAAGAAGTCGGAAAAGCAGCTGCGCGTCTATGAAAAGGGCAG 28764 Query 720 GGAACAAGGCGACAAGAGTTCGCCGTGGGTGCGCTATGAGGCGCAGTTCCGCAACTCCAA 779 |||||| || |||||||||||||| ||||| ||||||||||| |||||||| || || Sbjct 28765 GGAACAGGGTGACAAGAGTTCGCCATGGGTCCGCTATGAGGCTCAGTTCCGTGCGTCGAA 28824 Query 780 TCGCAAGGAACTGCCGCTCGACATTCTGCGTGATCCGGCCTCCTACCTGCTCGGGGCTTA 839 ||||| |||||||| || || |||| || ||||| || || |||||||| || || || Sbjct 28825 CCGCAAAGAACTGCCCCTTGATCTTCTCCGCGATCCCGCGTCGTACCTGCTGGGCGCCTA 28884 Query 840 TCCGGTCCTGTCCTTTCTGCGCTGTGTTGCTACGCGCATCGAAATCACGAAAGCCGCCGT 899 |||||| ||| || |||| || ||||| ||||||||||||||||||||||||||||| Sbjct 28885 TCCGGTGCTGCGGTTCCTGCAATGCGTTGCCACGCGCATCGAAATCACGAAAGCCGCCGT 28944 Query 900 TGAGGCGACGTGGAAGA 916 ||| || || ||||||| Sbjct 28945 TGATGCCACCTGGAAGA 28961 Score = 648 bits (718), Expect = 0.0 Identities = 436/487 (90%), Gaps = 0/487 (0%) Strand=Plus/Plus Query 938 GCCAGTACGGCGCGGCCCTCAATTTCATCGCCAAGAACTGCCCAGACGATCAGGCATTGC 997 |||||||||||||||| ||||||||||||| |||||||||||| |||||||| | |||| Sbjct 29104 GCCAGTACGGCGCGGCTCTCAATTTCATCGTCAAGAACTGCCCCGACGATCATTCGTTGC 29163 Query 998 GGGCGGTAATCGAATCCTGCACTTCGCCATCGCTGCCGAAGTGGGTCACAGGTGACACAG 1057 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 29164 GGGCGGTAGTCGAATCCTGCACTTCGCCATCGCTGCCGAAGTGGGTCACAGGTGATACAG 29223 Query 1058 CAGCGCACTGGCCCGAAATCGCGGCCGTACAGCCAACCTCAAAGGGGTAACAACACATGA 1117 ||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| Sbjct 29224 CAGCGCACTGGCCCGAAATCGCGGCCGTACAACGAACCCAAAAGGGGTAACAGCACATGA 29283 Query 1118 GCATCAAGGTCACCGTCCTCAAGAACGAAATTGACGAACGCGGCGGCAGCTTCAAGAACG 1177 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 29284 GCATCAAGGTCACCGTCCTGAAGAACGAAATTGACGAACGCGGCGGCAGCTTCAAGAACG 29343 Query 1178 ACGCTGGCGAGAACGTGGAATACACCACCCGCAAGCAGAAGGCCAAGCTGGAAACCGGTG 1237 | || ||||||||||| || |||| ||||||||||||||||| |||||||| | | | Sbjct 29344 ATGCGGGCGAGAACGTCGAGTACATCACCCGCAAGCAGAAGGGGAAGCTGGAGGCTGACG 29403 Query 1238 GTTTTGCCTACCCGTTCGACGTGCGCCTGGACAAGGGTCAGCCGGGCTACCCCGAGGGCG 1297 | || ||||| ||||| || ||||||||||||||||||||||||| || |||| |||| Sbjct 29404 GGTTCGCCTATCCGTTTGATGTGCGCCTGGACAAGGGTCAGCCGGCGTATCCCGCAGGCG 29463 Query 1298 AGTACGAGCTCGATGTTGAATCCATGTTGCAGGTCAACAAGGGCGTTGCCTCGCTGAGCA 1357 ||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct 29464 AGTACGAGCTCGACGTTCCGGCCATGTTGCAGGTCAACAAGGGCGTTGCGTCGCTGAGCA 29523 Query 1358 AGTTCACCGTGCTGCGCCCGCTGCAGAAGGCTGCGCCACGCCCGGCAGCGCAGGCCTGAG 1417 |||||||||||||||| || ||||||||||||||||| |||||| | ||||||| || || Sbjct 29524 AGTTCACCGTGCTGCGTCCCCTGCAGAAGGCTGCGCCGCGCCCGACTGCGCAGGGCTAAG 29583 Query 1418 TCATGGC 1424 ||||| Sbjct 29584 CGATGGC 29590 Score = 168 bits (186), Expect = 2e-38 Identities = 132/158 (84%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 5466 GCCATCGTGGCCGTGTCCATTGGCGGCGCTCGCATCGTTTCGTGGTTGCTCGACCGGCGT 5525 ||||||| || || ||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 27732 GCCATCGCTGCTGTTTCCATCGGCGGCGCTCGCATCGTCTCGTGGCTGCTCGACCGGCGC 27791 Query 5526 GAGTACACCGCCGCGCAGCAGCTGCGCGAAGCCCAGGTCATCGCACTCGCGCGGGCCGAG 5585 || |||||| ||||||||| | |||||||||||||||||| ||||||| ||||||| Sbjct 27792 GATTACACCACCGCGCAGCGGTCCCGCGAAGCCCAGGTCATCACACTCGCAAAGGCCGAG 27851 Query 5586 ATTGCGGCCACGAAGCGCGGTGATCTGCTCGCTGCCGC 5623 ||||| |||| |||||| | |||||||| || || || Sbjct 27852 ATTGCCGCCAACAAGCGCAGCGATCTGCTGGCCGCAGC 27889 Score = 118 bits (130), Expect = 4e-23 Identities = 93/109 (85%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 4472 GGGTGTAGGGGCAGCGCCCC-TACGGAAGCGCTTCACACGCGCTGGCGAGGTATCGGCCC 4530 ||||| ||||| |||||||| ||||||||| | ||||||||||||||||| | ||||||| Sbjct 34781 GGGTGCAGGGG-AGCGCCCCCTACGGAAGCACCTCACACGCGCTGGCGAGATCTCGGCCC 34723 Query 4531 CGGTACCGGTAGGACTGCTGCCGGCGGTTCGGCGTCGGGGCCAGCCATC 4579 |||| || ||||| ||||| | ||| ||||||||||| ||||||||| Sbjct 34722 AGGTATAGGCAGGACCGCTGCTGCCGGCTCGGCGTCGGGCCCAGCCATC 34674 Score = 89.7 bits (98), Expect = 2e-14 Identities = 130/181 (72%), Gaps = 12/181 (7%) Strand=Plus/Plus Query 4466 CTGCCGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCTTCACACGCGCTGGCGAGGTATC 4525 || |||||||||||||||||||||||||||||||||| |||||||||||| || || | Sbjct 33940 CTTCCGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCCTCACACGCGCTGACGCGGCCTT 33999 Query 4526 GGCCC-CGGTACCGGTAGGACTGCTGCCGGCGGTTCGGCGTCG-----GGGCCAGCCATC 4579 ||||| ||| | |||| ||| | | | |||||||||| ||||| || | Sbjct 34000 GGCCCACGGCTCAGGTA-GACCACATTGGAAGTTTCGGCGTCGGAACCGGGCCCGCACAC 34058 Query 4580 GCCCCCGATGACCGCCTTTCTCGGCGATGTGCCAAGGCATCGGAGAGGTTCACCACGCTG 4639 |||| |||||| ||| |||||| | | || |||| |||| | ||||||| Sbjct 34059 GCCC-----AACCGCCGTTCCCGGCGAATTCTGAGCGCCTCGGCAAGGTAGATCACGCTG 34113 Query 4640 G 4640 | Sbjct 34114 G 34114 >seq116276 Length=4445 Score = 111 bits (122), Expect = 6e-21 Identities = 81/94 (86%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 226 GCCTTGCAGGTGTTCTGCTGGTTCTTCGCCGGTCTGGGTCTTGAACTGGATGAAACGGCC 285 || |||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct 1810 GCATTGCAGATGTTCTGCTGGTTCTTCGCCGGGCTTGGCCTTGAACTGGATGAGACGGCC 1869 Query 286 GGCGGCGGCCGCTTCTACACGTGGCGAATCAAGA 319 || || || ||||||||| |||||| |||||| Sbjct 1870 GGGGGAGGGCGCTTCTACCTGTGGCGCGTCAAGA 1903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18472886941560