Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_021569.1 Length=7069 Score E Sequences producing significant alignments: (Bits) Value seq131851 1849 0.0 seq116276 104 1e-18 >seq131851 Length=40801 Score = 1849 bits (2050), Expect = 0.0 Identities = 1637/2042 (80%), Gaps = 11/2042 (1%) Strand=Plus/Plus Query 4163 ggCCCTGGAACAGGCGAAGGTGGTGACGGCGGCGCGC------CGGGGCCGACGACAGGG 4216 || || |||| ||||| || || ||||| |||| | || || || |||||| Sbjct 31178 GGACCAGGAAACGGCGATGGCGGGGACGGTGGCGGTGATGGAGCTGGTCCCACCACAGGG 31237 Query 4217 CGCCTCTACAAGAAGTCAGGCAAGACGGTTCAGAAGGTCGTCGCGGAGTTCAAGGCGGCC 4276 |||||||||||||| ||||| ||||| || |||||||| | || || |||||| | || Sbjct 31238 CGCCTCTACAAGAAATCAGGAAAGACCGTCCAGAAGGTGCTTGCAGACTTCAAGACAGCT 31297 Query 4277 ATTGAGGGCGCTCCCATCCTGTCGAAGGTCAAAGGCTTCTTCGGTAGCTGTACCGGCGGT 4336 || |||||||| || ||||| || ||||| || || ||||| || ||||| || || ||| Sbjct 31298 ATCGAGGGCGCCCCGATCCTCTCCAAGGTGAAGGGGTTCTTTGGCAGCTGCACTGGTGGT 31357 Query 4337 GGCAGCTGCCCAACCGCCACGTGGGACGGTGGGCAGTACGCCGGAAAGTTCGACCTTGGC 4396 || ||||||||||| || ||||||||||| || |||||||||||||| ||||| || || Sbjct 31358 GGAAGCTGCCCAACTGCGACGTGGGACGGCGGACAGTACGCCGGAAAATTCGATCTGAGC 31417 Query 4397 GCGCTGTGTTCCGGCCCACTGTTACAACTTTTCCAGTACGCCGGGTTTGTGTTTCTTGCG 4456 | || ||| ||| || || | ||||| || |||||||| || |||||||| |||||| Sbjct 31418 ACCCTCTGTAGCGGGCCTCTTCTGCAACTGTTTCAGTACGCAGGATTTGTGTTCCTTGCG 31477 Query 4457 GGCATGGGCATCGTCGCGCTGAGGTGGGCACTGCTATGAAACGCAATCATCTGATCGTGC 4516 ||||||||| |||| || ||||||||||| ||||||||| || | || ||| | |||| Sbjct 31478 GGCATGGGCGTCGTAGCTCTGAGGTGGGCGTTGCTATGAAGCGGAGACACCTGGTGGTGC 31537 Query 4517 TTGGCGCTGCGCTACTCGTGCTGGTGCTGTCTGCCTCTTGGGCATATGCCGATGGGGGCG 4576 | | | ||||| | || ||||| ||||| || || ||||| || |||||||| | | Sbjct 31538 TGGTCACTGCGTTGACGGTACTGGTCCTGTCGGCATCCTGGGCTTACGCCGATGGCGTTG 31597 Query 4577 GGCCGGTCACCGCGCTTACCACCTGGGCAAAGGAGCAGATCACGTCGCTGTGGGCGGACT 4636 | ||||| || || |||| ||||||| ||||| |||||||||||| ||||||| || | Sbjct 31598 GCCCGGTGACTGCCATTACAGCCTGGGCCAAGGAACAGATCACGTCGTTGTGGGCCGATT 31657 Query 4637 TCTCCGACTTCATGACGGACCTACAAACCGACTTCATCGAGCTGGCGTTGTCGTTCGTCA 4696 || ||||||||||||| ||||| || || |||||||||||||||| | |||| | ||| | Sbjct 31658 TCACCGACTTCATGACCGACCTGCAGACGGACTTCATCGAGCTGGTGCTGTCCTACGTGA 31717 Query 4697 AGGCCATCGTGTACCTGATTCCAGCGCCTGATTTCCTGTCCCAGATCAGCTTCTGCGCGA 4756 | || | || |||||||| |||||||| || |||||||| ||||| || |||||||||| Sbjct 31718 AAGCGTTGGTCTACCTGATCCCAGCGCCAGACTTCCTGTCTCAGATGAGTTTCTGCGCGA 31777 Query 4757 TGCTCAACGCCGCGGGGCCGTGGACGGCGTTCATCGTTGCCCAGTTGCGCGTCGGCGAGG 4816 |||||| ||| || || || ||||| || ||||||||||| ||| | ||||||||||||| Sbjct 31778 TGCTCACCGCGGCCGGTCCATGGACAGCCTTCATCGTTGCGCAGCTCCGCGTCGGCGAGG 31837 Query 4817 CTATCGCGGTACTGACGGCTGCACTTGTATTCCGCCTTGTGCGGGTGTTCCTCACTCTCT 4876 | ||||| | || || || || ||| | |||||||| ||||| |||||| | || || | Sbjct 31838 CCATCGCACTGCTCACCGCCGCGCTTATTTTCCGCCTCGTGCGCGTGTTCTTGACCCTAT 31897 Query 4877 TCCAGTGGACGTAACGAAATGATCTTCGGCCATGAAGGCTTGCCGCGCAGCGGCAAGAGC 4936 ||||||||||||||||| |||||||| || || ||||| ||||||| |||||||||||| Sbjct 31898 TCCAGTGGACGTAACGACATGATCTTTGGTCACGAAGGGCTGCCGCGGAGCGGCAAGAGC 31957 Query 4937 TACGAGGCGGTTCTCCATCACATCCTTCCTGCATTGCGGGCGAAGCGGCACGTCTACGTG 4996 ||||| || ||||| || |||||||| || || | || || |||||||| || |||||| Sbjct 31958 TACGAAGCTGTTCTGCACCACATCCTGCCGGCGCTCCGCGCCAAGCGGCATGTGTACGTG 32017 Query 4997 CGCCTAAACGGGGTAGGGGAGAGCCTCGACAAGATCGCCGCCCACCTGGGCATGCCTGAA 5056 || | || ||||||||||| | ||||||||||||||||| ||||||| ||||| ||| Sbjct 32018 CGATTGAATGGGGTAGGGGACAAGCTCGACAAGATCGCCGCGCACCTGGAAATGCCGGAA 32077 Query 5057 GAGGAGGTGCGCGAGCTGGTGCACGTGATGGGCGACAAGGAAGTGGTTGACTGGTGCGTA 5116 || ||||||||| ||||| ||||||||||||||||| || || || || |||||||| Sbjct 32078 GAAGAGGTGCGCAGCCTGGTCCACGTGATGGGCGACAAAGAGGTCGTAGAGTGGTGCGTC 32137 Query 5117 TGCGACACCGACAACGATGGCGCCATTTCGTTCCCACATATCGAGAAGCACGCACTGATC 5176 |||||||| ||||| || |||| | ||||||| || |||||||||||||| ||| || Sbjct 32138 TGCGACACTGACAATGACGGCGGGGTCACGTTCCCGCACATCGAGAAGCACGCCCTGGTC 32197 Query 5177 GTGATCGATGAGGCGCACGAATACTGGCCGACCAACCGCGCCAACCTGCCCGAGCGCACT 5236 ||||||||||||||||| || |||||||| ||||| || || |||||||| ||||| | Sbjct 32198 GTGATCGATGAGGCGCATGAGTACTGGCCCACCAATCGTGCGAACCTGCCAGAGCGGGCG 32257 Query 5237 GCAAACTTCTTTGCCAAGCACGGCCATATCAGCTTGGACATGGTGATCATTTCGCAGGAC 5296 || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 32258 GCCAACTTCTTTGCCAAGCACGGCCATATCAGCCTGGACATGGTCATCATTTCGCAGGAC 32317 Query 5297 TGCAAAGACCTGCACCGCCTGATCATCCGCCGCATGGCGAAGAAGAACACGTATACCAAG 5356 |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct 32318 TGCAAAGACCTGCATCGGCTGATCATTCGCCGCATGGCGAAGAAGAACACGTATACCAAG 32377 Query 5357 CTCGACGCGCTGGGGTCCGATCAGCGGTACTCGGTGCGGTTCTATGCGGCCACTGGCACC 5416 || || ||||| || || |||||||| |||||||| ||||||| || ||||| || ||| Sbjct 32378 CTGGATGCGCTCGGCTCGGATCAGCGCTACTCGGTCAGGTTCTACGCCGCCACCGGTACC 32437 Query 5417 GGCAAATACGAAACGGTGGGCACAGAGGTCCGCAAGTACGATCCGGCCATCTGGGAGCTC 5476 ||||| || || ||||| || || ||| || |||||||| ||||| || ||| |||| Sbjct 32438 GGCAAGTATGAGACGGTCGGTACCGAGACTCGAAAGTACGACCCGGCGATTTGGCAGCTG 32497 Query 5477 TACCACGGCGTACAGCCGGGCATTGAGTCCAATGAGGTCTACAAGGGAAACACGCGCACT 5536 ||||||||||| || || ||||| ||| |||||| ||||||||||| ||||| ||||| Sbjct 32498 TACCACGGCGTTCAACCTGGCATCGAGAGCAATGATGTCTACAAGGGCAACACCCGCACG 32557 Query 5537 TTGTGGAAGACCCTGCGCGGCCCATCAATCGTAATGGGCCTCGCACTTG-TCATTGGCGT 5595 ||||||||||| |||| | || ||||| | |||||||| || |||| || | || || Sbjct 32558 CTGTGGAAGACCTTGCGGGCACCCTCAATTTTTATGGGCCTGGC-CTTGATCCTGGGTGT 32616 Query 5596 GGTGATGTTCCTGCGGTTCTTCTTCGCAGACGG---CTCAACGGGGGAGGAAAGCAAGCT 5652 ||| || |||||||||||| | | ||| |||||||||| | ||| | Sbjct 32617 CTATATGCTCGGCCGGTTCTTCTTCTCGGGCGGGGATTCAACGGGGGGCGCTGACAAAGT 32676 Query 5653 CAAGGAGGTTGTCAAGACGCAGAAGGCCGCAATTCCCGCGATAGCGCACGCGCCGGGTGC 5712 || |||| || | |||||||| || || || ||||| || || || || || || Sbjct 32677 GAAAGAGGCCGTGGCTTCTCAGAAGGCGGCCATACCAGCGATGGCTCATGCACCTGGAGC 32736 Query 5713 TCAGCCGGCCACGGTGGTCACAAAGGTTGTCGAGACGCCCAAGACGAAGGAGAAGCTTCC 5772 || ||||| |||||||| || |||| | ||| | |||||| ||||||| ||||| Sbjct 32737 GCAACCGGCAACGGTGGTGACCAAGGCGGCGGAGGCACCCAAGCAGAAGGAGGCACTTCC 32796 Query 5773 TGCGGGCGTTCAGTACATTCTGGACATGGCGGCCAATGCCAGGGCGAGGCACGCCGGGTG 5832 || ||||| |||||||| ||||||||||| ||||||||||||||| |||| || || || Sbjct 32797 AGCCGGCGTACAGTACATCCTGGACATGGCCGCCAATGCCAGGGCGCGGCATGCAGGCTG 32856 Query 5833 GTATGGCCAGCGCGACATCGTGGAGTTTCGCGCGTCAGGCGGCGGGCAAGTACTCGACCG 5892 |||||| || |||||||| || |||||||| || | |||||||| || || || ||||| Sbjct 32857 GTATGGGCAACGCGACATTGTCGAGTTTCGGGCAACGGGCGGCGGCCAGGTGCTTGACCG 32916 Query 5893 ATTCACCACTGAGCAGCTGTGGGCGCTGGGCTGGTCTGTCAAGCGAACCGAATTCGGCGT 5952 |||||||| || ||||| ||||||||||||||||| |||||||| || || |||||||| Sbjct 32917 GTTCACCACCGAACAGCTTTGGGCGCTGGGCTGGTCCGTCAAGCGGACGGAGTTCGGCGT 32976 Query 5953 GTTACTGAGCGCTAAGGGGCATGAGATTATCGCCACGACTTGGCCCGTGGACCCGTTTGG 6012 | ||| || ||||| || ||||| ||||| || ||||||||||| || ||||| || Sbjct 32977 ACTGCTGTCGGCGAAGGGCCACGAGATCATCGCGACCACTTGGCCCGTTGATCCGTTCGG 33036 Query 6013 CGAGCAGTCCGATGCTACGACCGCGCGCATAAAGGCTGCGGCGGGGTCGCCTGTGACGAG 6072 ||| |||||||| | || |||| |||||||| ||||||||||||| |||||||||||| Sbjct 33037 CGAACAGTCCGAGTCGACCACCGAGCGCATAAGGGCTGCGGCGGGGGAGCCTGTGACGAG 33096 Query 6073 CGCGAGCGAGACACAGCCGACCACCGCCGCGGCGAACGGGAGCACCCTAATTGCAGTTGG 6132 ||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct 33097 CGCGAGCGAGACACAGCCGACCACCGCCGTGGCGAACGGGAGCACTCTCATTGCAGTTGG 33156 Query 6133 GAAGCGCCCCTTGGGCACGTTCCCAGAGACGCCGCCATACCCGGCGAGCTTCTGATTTTC 6192 |||||||| ||||||||||||| |||||||||||||| ||||||| ||| | ||| || Sbjct 33157 TAAGCGCCCGCTGGGCACGTTCCCCGAGACGCCGCCATATCCGGCGACCTTTTAATTATC 33216 Query 6193 GT 6194 || Sbjct 33217 GT 33218 Score = 1577 bits (1748), Expect = 0.0 Identities = 1231/1475 (83%), Gaps = 6/1475 (0%) Strand=Plus/Plus Query 1993 GCCAGTACGGCGCGGCCCTCAATTTCATCGCCAAGAACTGCCCAGACGATCAGGCATTGC 2052 |||||||||||||||| ||||||||||||| |||||||||||| |||||||| | |||| Sbjct 29104 GCCAGTACGGCGCGGCTCTCAATTTCATCGTCAAGAACTGCCCCGACGATCATTCGTTGC 29163 Query 2053 GGGCGGTAATCGAATCCTGCACTTCGCCATCGCTGCCGAAGTGGGTAACAGGTGACACAG 2112 |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 29164 GGGCGGTAGTCGAATCCTGCACTTCGCCATCGCTGCCGAAGTGGGTCACAGGTGATACAG 29223 Query 2113 CAGCGCATTGGCCCGAAATCGCGGCCGTACAACCAACCTCAAAGGGGTAATG--AAATGA 2170 ||||||| ||||||||||||||||||||||||| |||| |||||||||| | |||| Sbjct 29224 CAGCGCACTGGCCCGAAATCGCGGCCGTACAACGAACCCAAAAGGGGTAACAGCACATGA 29283 Query 2171 ---TCAAGGTCATCGTACTGGATTCGCAGATCAACGAGCGTGGCGGCAGCTTCACCAACG 2227 ||||||||| ||| ||| | | || |||| || ||||||||||||| |||| Sbjct 29284 GCATCAAGGTCACCGTCCTGAAGAACGAAATTGACGAACGCGGCGGCAGCTTCAAGAACG 29343 Query 2228 ACCGCAACGAGAACGTTGAATTCACCACCCGCAAGCAGCGCGCCAAGCTGGAGGCGGACG 2287 | ||||||||| || | || ||||||||||||| | ||||||||||| |||| Sbjct 29344 ATGCGGGCGAGAACGTCGAGTACATCACCCGCAAGCAGAAGGGGAAGCTGGAGGCTGACG 29403 Query 2288 GTTTCGCCTATCCGTTCGACGTGCGCCTGGACAAGGGTCAGTCGGGCTATCCGGCGGGCG 2347 | |||||||||||||| || ||||||||||||||||||||| ||| ||||| || |||| Sbjct 29404 GGTTCGCCTATCCGTTTGATGTGCGCCTGGACAAGGGTCAGCCGGCGTATCCCGCAGGCG 29463 Query 2348 AGTACGAGCTCGACGTCCCGGCCATGCTGCAGGTCAATAAGGGCGTTGCAACCCTGAGCA 2407 |||||||||||||||| ||||||||| |||||||||| ||||||||||| | ||||||| Sbjct 29464 AGTACGAGCTCGACGTTCCGGCCATGTTGCAGGTCAACAAGGGCGTTGCGTCGCTGAGCA 29523 Query 2408 AGTTCACGATCCTGCGCCCGCTGCAGAAGGCTGCGCCGCGCCCGGCAGCGCAGGCCTAAG 2467 ||||||| | ||||| || |||||||||||||||||||||||| | ||||||| ||||| Sbjct 29524 AGTTCACCGTGCTGCGTCCCCTGCAGAAGGCTGCGCCGCGCCCGACTGCGCAGGGCTAAG 29583 Query 2468 TCATGGCCGTGTGCGTGTCTCTGACGGCTGAGGGGACGCTTGTACCCACCGGGGAGCCTG 2527 |||||||||||||| |||||||||||||||||||||| ||||| || |||||||||| Sbjct 29584 CGATGGCCGTGTGCGTAGCTCTGACGGCTGAGGGGACGCTCGTACCTACTGGGGAGCCTG 29643 Query 2528 CATCGCAGTGTGGTGGGTATGTGCTTGTGTCGGCGGCAGAACACGCACAGGCCTCAATCC 2587 ||||||||||||||||||| |||||||| || || || || ||||||||||| ||||| | Sbjct 29644 CATCGCAGTGTGGTGGGTACGTGCTTGTCTCAGCAGCGGAGCACGCACAGGCGTCAATTC 29703 Query 2588 TCATCGATCTATTCCAGTGGCCCGAACCGGAAGTGGCCACTGGTTGGTTCTCGGGGGTGT 2647 |||||||| | |||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct 29704 TCATCGATTTGTTCCAGTGGCCCGAGCCGGAAGTGGCTACTGGTTGGTTCTCGGGAGTGT 29763 Query 2648 TCACGCTGGTGCTCGCACTGAACGTGCTGGGCTACATCGTGGGCGCCGTCGTGAAGTCGG 2707 ||||| |||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct 29764 TCACGTTGGTTCTCGCACTGAACGTGCTGGGGTACATCGTTGGCGCTGTCGTGAAGTCGG 29823 Query 2708 TCAGTACAGAGCGGGATTGACCACCCCATCTAACGCGCACANNNNNNNNNNCA-AAGGAG 2766 |||||||||| |||||||||||||||||||| |||||| | || |||||| Sbjct 29824 TCAGTACAGAACGGGATTGACCACCCCATCTCTCGCGCAGATCGCGCATCACAGAAGGAG 29883 Query 2767 CAGTGCAATGGACTTCGGCGACATTCTGACCGGCCTCGCAGCCGCCAGCGCAGTCAGCGC 2826 || ||||||||| |||| | ||| ||||| |||||||| ||| |||||||||||| ||| Sbjct 29884 CAATGCAATGGATTTCGACAGCATCCTGACTGGCCTCGCGGCCACCAGCGCAGTCACCGC 29943 Query 2827 AATCATCAGCGCAGGTGCCATCAAGGCATCCCCGGGCTTCGCCCGCTGGGCGACCAACAA 2886 ||||||| |||| || ||||||||||| | |||||||||||||||||||| |||||||| Sbjct 29944 AATCATCGGCGCTGGCGCCATCAAGGCCGCACCGGGCTTCGCCCGCTGGGCCACCAACAA 30003 Query 2887 GGTCGCCACCTTCTTCCGCTGATCGCGGGAGAATTGTGACGGGGAGGGGCTGGGAAACCG 2946 |||||||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||||||| Sbjct 30004 GGTCGCCAACTTCTTCCGCTAATCGCGGAAGAATCGTGACGGAGAGGGGCTGGGAAACCG 30063 Query 2947 GCCCCGATTCCTATGCAGACACAGCCCGATGACGTGAGCGCCGATGAGTGCCAGGACGAT 3006 ||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||| Sbjct 30064 GCCCCAATTCCTATGCAGACACAGCCCGATGACGTCAACGCCGATGAATGCCAGGACGAC 30123 Query 3007 TGGTGCCCAGAGTGTGGTGGCGATGACGTGATCGTGTTGGACGACGGCAATCTGTGGTGC 3066 ||||| || |||||||| || ||||||||||||||| ||||||||||||| ||||||| Sbjct 30124 TGGTGTCCCGAGTGTGGAGGTGATGACGTGATCGTGCTGGACGACGGCAACTTGTGGTGT 30183 Query 3067 ACGGAGTGCCGTGCCGTCGTTGACTACTAGGGGCGGGTGATGGATTTCAGTGGGGTGTTC 3126 |||||||| || ||||| | |||||||||||| | ||||||| ||||| || |||| Sbjct 30184 ACGGAGTGTCGATCCGTCATCGACTACTAGGGGGAGCTGATGGACTTCAGCGGTTTGTTT 30243 Query 3127 CTCGGGCTATCCGTCGCACAGGTGGTGGCAGCAATTGTTGGTGCCGGCACCTTGATGGCG 3186 || || || || || ||||||| | |||| || ||||| || || ||||| || |||| Sbjct 30244 CTTGGCCTTTCGGTTGCACAGGCGCTGGCCGCGATTGTGGGCGCGGGCACGGTGCTGGCC 30303 Query 3187 CTCCCTTGGTTCGGACGATGGTGTGTCGACAAGATCGCAGGATTCTTTGAGGACCGCGAG 3246 || ||| ||||| || ||||| ||||| ||| ||||||| ||||| |||||||| || Sbjct 30304 CTACCTCTCTTCGGTCGGTGGTGCGTCGAGAAGGTCGCAGGCTTCTTCGAGGACCGTGAA 30363 Query 3247 GACCAGGACGCNNNNNNNNNNNNNNNNNNTGAGGCGGGAGAGGTTGAAGAGGTCGTGTGC 3306 || | || || ||||||||| || ||||| |||||||||||| Sbjct 30364 GAGCTTGATGCTGACGAACACGCCGACGATGAGGCGGGCGAAGTTGACGAGGTCGTGTGC 30423 Query 3307 GCTGACACCGGCCATGACTATGACGGTGGCGAGTGCATCTTCTGCGGCCAACCGGAAAAG 3366 || || ||||||||||||||||||| || |||||| ||| ||||||| || ||||| | Sbjct 30424 GCAGATGCCGGCCATGACTATGACGGCGGAGAGTGCGTCTACTGCGGCGCACAGGAAAGG 30483 Query 3367 GAGGATTGACGATGCTGGTGTGCATGGTATTCGCGTTTATCGGCGGCCTGACGGGGCATG 3426 |||||||||||||||| ||||||||||| ||||| || || |||||||| | || || | Sbjct 30484 GAGGATTGACGATGCTTGTGTGCATGGTTTTCGCTTTCATTGGCGGCCTTGCTGGTCACG 30543 Query 3427 CTGTCGCATTGGCGTTCAATGAGGCCAGCCAATGA 3461 | || || |||| |||||||||||| |||| ||| Sbjct 30544 CAGTAGCCCTGGCATTCAATGAGGCCTGCCAGTGA 30578 Score = 892 bits (988), Expect = 0.0 Identities = 744/920 (81%), Gaps = 0/920 (0%) Strand=Plus/Plus Query 1052 CGCAATGGTCGGTGATCGCGCGGTGCCGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGG 1111 |||||||| || |||||||||||||| ||| | ||||||||||||| ||||||||||||| Sbjct 28042 CGCAATGGCCGTTGATCGCGCGGTGCTGGCGGAGTCGGGACTCCCCGCGTCTAACAGGGG 28101 Query 1112 AGTCAGTGAATTCAGGAACCCCGAGGGAACCCTGACGGTCGGCATTGATTGGTTCTCCGC 1171 ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||| Sbjct 28102 AGTCAGTGAATTCAGGAACGCCGATGGAACCCTGACGGTCGGCATTGACTGGTTTTCCGC 28161 Query 1172 TTCCATCGATCTGCGCGCAGCGCTGGACGAGGTCGCATTCCGTGATGGCGACAGTTTCGA 1231 ||| | || || || | || |||| |||| ||||| ||||||||| || ||| Sbjct 28162 TTCGGTGGACATGTTTGCGGTCCTCAACGAACTCGCCTTCCGCGATGGCGACTCTTACGA 28221 Query 1232 AGAGGTCCGCCAGTGGATCGAGTTCTCCCCGGAAAACGCACGTGTTGCGGCCCTGCAGGT 1291 ||| ||||| |||||||| || ||| | | || |||||||| || | || ||||| | Sbjct 28222 AGAAGTCCGGCAGTGGATTGATTTCAGCGCTGATAACGCACGCGTGGTCGCATTGCAGAT 28281 Query 1292 GTTCTGCTGGTTCTTCGCTGGGCTGGGCCTTGAACTGGATGAAGCAGCAGGCGGCGGTCG 1351 |||||||||||||||||| ||||| ||||||||||||||||| | || || || || || Sbjct 28282 GTTCTGCTGGTTCTTCGCCGGGCTTGGCCTTGAACTGGATGAGACGGCCGGGGGAGGGCG 28341 Query 1352 CTTCTACATGTGGCGAATCAAGATCATCGACGCGGCCAAGAAGTTCGTCGGGATGATCGA 1411 ||||||| ||||||| ||||||||||| |||| | |||||||||||||| ||||| || Sbjct 28342 CTTCTACCTGTGGCGCGTCAAGATCATCAACGCCGAAAAGAAGTTCGTCGGCATGATTGA 28401 Query 1412 ACTGGGCGGCGAAAAGTGCCGCCGCGCCGATGGCACATATACCGCCCGCATCGAGCTAAC 1471 ||| ||||| || || |||||||| || || || || |||||||| || ||||| | || Sbjct 28402 ACTCGGCGGTGAGAACTGCCGCCGTGCAGACGGAACGTATACCGCTCGAATCGAATTGAC 28461 Query 1472 CGGTGATGGATGCAAAGCGATAGGCGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGA 1531 |||||| ||||||| || ||| |||||||||||||||||||||| ||||||||||||| Sbjct 28462 CGGTGACGGATGCAGGGCAGTAGCCGCAGCGCGCTGCGGCCATGCGAAGCGGTGGCTGGA 28521 Query 1532 GCTTCGAGCGAAGCTCGAAAGCTGCGCCGGAAGGATCACCCGCGTCGACGTGTGCGCAGA 1591 |||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||| || Sbjct 28522 GCTTCGAGCGAAGCTCGAAAGCTGCGGCGGCAGGATTACCCGTGTCGACGTGTGCGCCGA 28581 Query 1592 TGATCTGATCGGTGAATACCCATTGCGCCTGGCGCAGAAGTGGTACGCAGCTGGTGAGTT 1651 ||| |||| || | ||||||||||||||||| ||||||||||||| | || ||||| Sbjct 28582 TGACTTGATGGGCAAGTACCCATTGCGCCTGGCACAGAAGTGGTACGAGGAAGGCGAGTT 28641 Query 1652 CGATAACCGTGGCCAGCGCCCTAAGGCGCAGCTGGTGGACGACTACGACAGCGGCGACGG 1711 | | || || || ||||| || || ||| ||||| | || |||||||||||||||||||| Sbjct 28642 CAACAATCGCGGTCAGCGTCCGAAAGCGGAGCTGATAGATGACTACGACAGCGGCGACGG 28701 Query 1712 CAAGACGCTCTACATCGGCGGCAAGAAGTCGGAGAAGCAGCTGCGTGTGTATGAGAAGGG 1771 ||||||||||||| | ||||| ||||||||||| ||||||||||| || ||||| ||||| Sbjct 28702 CAAGACGCTCTACGTGGGCGGAAAGAAGTCGGAAAAGCAGCTGCGCGTCTATGAAAAGGG 28761 Query 1772 CAGAGAGCAGGGCGACAAGAGCTCTCCGTGGGTGCGCTATGAGGCTCAGTTCCGCAACTC 1831 ||| || ||||| |||||||| || || ||||| |||||||||||||||||||| || Sbjct 28762 CAGGGAACAGGGTGACAAGAGTTCGCCATGGGTCCGCTATGAGGCTCAGTTCCGTGCGTC 28821 Query 1832 AAACCGCAAGGAACTGCCCCTCGACATTCTGCGGGATCCGGCCTCCTACCTGCTCGGCGC 1891 |||||||| ||||||||||| || |||| || ||||| || || |||||||| ||||| Sbjct 28822 GAACCGCAAAGAACTGCCCCTTGATCTTCTCCGCGATCCCGCGTCGTACCTGCTGGGCGC 28881 Query 1892 CTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCGCATCGAAATCACGAAAGCCGC 1951 |||| ||||||||||||||||||||||||||| Sbjct 28882 CTATCCGGTGCTGCGGTTCCTGCAATGCGTTGCCACGCGCATCGAAATCACGAAAGCCGC 28941 Query 1952 TGTCGAGGCCACGTGGAAGA 1971 || || ||||| ||||||| Sbjct 28942 CGTTGATGCCACCTGGAAGA 28961 Score = 210 bits (232), Expect = 1e-50 Identities = 157/184 (85%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 558 GGAGCCATTGCGGCTATCTCCATTGGTGCCGCTCGTATCGTTTCGTGGCTGCTCGACCGG 617 || ||||| || ||| | ||||| || | |||||| ||||| |||||||||||||||||| Sbjct 27729 GGGGCCATCGCTGCTGTTTCCATCGGCGGCGCTCGCATCGTCTCGTGGCTGCTCGACCGG 27788 Query 618 CGTGACTACACCGCCTCGCAGCAGTCACGCGAAGCCGAGGTCATCGCACTCGCAGAGGCG 677 || || |||||| || |||||| ||| ||||||||| |||||||| |||||||| |||| Sbjct 27789 CGCGATTACACCACCGCGCAGCGGTCCCGCGAAGCCCAGGTCATCACACTCGCAAAGGCC 27848 Query 678 GAGATTGCCGCCACCAAGCGCGGCGATCTGCTGGCCGCCGCTCGCTACGCCGAACAGCAC 737 ||||||||||||| ||||||| |||||||||||||||| || | ||||||||| ||||| Sbjct 27849 GAGATTGCCGCCAACAAGCGCAGCGATCTGCTGGCCGCAGCCCACTACGCCGACCAGCAG 27908 Query 738 GAGG 741 |||| Sbjct 27909 GAGG 27912 Score = 100 bits (110), Expect = 1e-17 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 6642 GGGTGTAGGGGCAGCGCCCC-TACGGAAGCGCCTCACACGCGCTGGTAAGGTCTCGGCCC 6700 ||||| ||||| |||||||| ||||||||| ||||||||||||||| || ||||||||| Sbjct 34781 GGGTGCAGGGG-AGCGCCCCCTACGGAAGCACCTCACACGCGCTGGCGAGATCTCGGCCC 34723 Query 6701 CGGCGCCGGCAGGACACCCGCAACAGGATCGGCGTCAGGACCAGCCATCACCGTGGAAGA 6760 || |||||||| | || | || |||||||| || ||||||||||| ||| || Sbjct 34722 AGGTATAGGCAGGACCGCTGCTGCCGGCTCGGCGTCGGGCCCAGCCATCACTCTGGGCGA 34663 Query 6761 CCGC 6764 ||| Sbjct 34662 ACGC 34659 Score = 87.8 bits (96), Expect = 8e-14 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 6639 CCGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCCTCACACGCGCTGGTAAGGTCTCGGC 6698 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct 33943 CCGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCCTCACACGCGCTGACGCGGCCTTGGC 34002 Query 6699 CC-CGGCGCCGGCAG 6712 || |||| | || || Sbjct 34003 CCACGGCTCAGGTAG 34017 Score = 84.2 bits (92), Expect = 1e-12 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 6640 CGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCCTCACACGCGCTGGTAAGGTCTCGGCC 6699 |||||||||||||| | |||||||||||||||||||||||||||||| | | ||||||| Sbjct 25970 CGGGGTGTAGGGGCGGAGCCCCTACGGAAGCGCCTCACACGCGCTGGCAGGACCTCGGCC 26029 Query 6700 C-CGGC 6704 | |||| Sbjct 26030 CACGGC 26035 >seq116276 Length=4445 Score = 104 bits (114), Expect = 1e-18 Identities = 77/90 (86%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1285 TGCAGGTGTTCTGCTGGTTCTTCGCTGGGCTGGGCCTTGAACTGGATGAAGCAGCAGGCG 1344 ||||| ||||||||||||||||||| ||||| ||||||||||||||||| | || || | Sbjct 1814 TGCAGATGTTCTGCTGGTTCTTCGCCGGGCTTGGCCTTGAACTGGATGAGACGGCCGGGG 1873 Query 1345 GCGGTCGCTTCTACATGTGGCGAATCAAGA 1374 | || ||||||||| ||||||| |||||| Sbjct 1874 GAGGGCGCTTCTACCTGTGGCGCGTCAAGA 1903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22460684195612