Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq65713 127 6e-26 >seq65713 Length=16701 Score = 127 bits (140), Expect = 6e-26 Identities = 316/475 (67%), Gaps = 21/475 (4%) Strand=Plus/Minus Query 1276 GAACGGATACGACCCTCTCCTGGCTGCCAACATCTTTAACGGTTGGTTGAACAAGGAATA 1335 ||| || || ||||||||| |||| ||||||||| | |||| | ||| ||| Sbjct 4455 GAAAGGCTATGACCCTCTCATGGCAGCCAACATCCT----GGTTTGCTGAGTGTGGAGAG 4400 Query 1336 CGGA-----AAAAGGAATACCATCTGGCTCTACGGACCAGCTACCACCGGAAAGACTATT 1390 || ||||| || ||||| ||| || || ||| || |||| || ||||| | Sbjct 4399 AGGCCAACCAAAAGAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAAC 4340 Query 1391 ATAGCGCAAGCTATAGCCCACGGTGCTGTCCTCTTTGGAGGAGTCAATTGGACTAATGAA 1450 || | | ||||| ||||| |||||| ||| | | | || ||||| | Sbjct 4339 ATCACAGAGGCTATTGCCCA---TGCTGTG-----TGGCTGCATAACCCAGAGTAATGGA 4288 Query 1451 AACTTTCCCTTTTGTAATTGTCCTGGTAAACTGTTGATATGGTGGGAAGAGGGTAAAATG 1510 |||||||| ||| | | | | | |||| || | || |||| ||| |||||||||||| Sbjct 4287 AACTTTCCTTTTAATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATG 4228 Query 1511 ACACAAAAGATGGTC-GAAACCGCCAAATG-TATATTAGGCGGTGCTGTTGTACCTGTGG 1568 || || |||| | ||| | |||| | | | || || | ||| || || | Sbjct 4227 ACT--AATGATGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTG 4170 Query 1569 ATATCAAAGGCAAAATGGCTGAACTGTGTGAAACCACCCCTGTCATTATTACCAGTAATA 1628 || || | ||| | ||| || |||| |||| ||||| |||||||||||||| | Sbjct 4169 ATCAGGAATGTAAATGGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACA 4110 Query 1629 CCAACATGTGTCAGGTCTTTGATGGTAACAGTAGCAGTTTTGAACATACCGAACCCTTAG 1688 | ||||| || | ||||| ||||||| | ||||||||||| ||| | |||| Sbjct 4109 TTGATATGTGGATTGTAGTGGATGGGAACAGTACAACTTTTGAACATAAGGAAACTTTAG 4050 Query 1689 AAGAAAGAATGTTTATGTTTAGGTTGAATAAGAAACTGGAACCTGATTTTGGAAA 1743 ||||||||| ||| ||||||| || ||| || ||| || |||||||||||| Sbjct 4049 AAGAAAGAACTTTTTTGTTTAGTTTTAATGTAAAGCTGAGACATGATTTTGGAAA 3995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14547717845575