Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_027429.1
Length=4590
Score E
Sequences producing significant alignments: (Bits) Value
seq65713 127 6e-26
>seq65713
Length=16701
Score = 127 bits (140), Expect = 6e-26
Identities = 316/475 (67%), Gaps = 21/475 (4%)
Strand=Plus/Minus
Query 1276 GAACGGATACGACCCTCTCCTGGCTGCCAACATCTTTAACGGTTGGTTGAACAAGGAATA 1335
||| || || ||||||||| |||| ||||||||| | |||| | ||| |||
Sbjct 4455 GAAAGGCTATGACCCTCTCATGGCAGCCAACATCCT----GGTTTGCTGAGTGTGGAGAG 4400
Query 1336 CGGA-----AAAAGGAATACCATCTGGCTCTACGGACCAGCTACCACCGGAAAGACTATT 1390
|| ||||| || ||||| ||| || || ||| || |||| || ||||| |
Sbjct 4399 AGGCCAACCAAAAGAAACACCATGTGGTTCCACAGACATGCAGCCACTGGGAAGACCAAC 4340
Query 1391 ATAGCGCAAGCTATAGCCCACGGTGCTGTCCTCTTTGGAGGAGTCAATTGGACTAATGAA 1450
|| | | ||||| ||||| |||||| ||| | | | || ||||| |
Sbjct 4339 ATCACAGAGGCTATTGCCCA---TGCTGTG-----TGGCTGCATAACCCAGAGTAATGGA 4288
Query 1451 AACTTTCCCTTTTGTAATTGTCCTGGTAAACTGTTGATATGGTGGGAAGAGGGTAAAATG 1510
|||||||| ||| | | | | | |||| || | || |||| ||| ||||||||||||
Sbjct 4287 AACTTTCCTTTTAATGACTATAGGGATAAAATGATTATTTGGTAGGAGGAGGGTAAAATG 4228
Query 1511 ACACAAAAGATGGTC-GAAACCGCCAAATG-TATATTAGGCGGTGCTGTTGTACCTGTGG 1568
|| || |||| | ||| | |||| | | | || || | ||| || || |
Sbjct 4227 ACT--AATGATGTTGTGAAGTCTGCAAAGGCTCTTTTGGGGGAATCTGCCATAAGGGTTG 4170
Query 1569 ATATCAAAGGCAAAATGGCTGAACTGTGTGAAACCACCCCTGTCATTATTACCAGTAATA 1628
|| || | ||| | ||| || |||| |||| ||||| |||||||||||||| |
Sbjct 4169 ATCAGGAATGTAAATGGCCTGTACAAACTGAACCCACTCCTGTGATTATTACCAGTAACA 4110
Query 1629 CCAACATGTGTCAGGTCTTTGATGGTAACAGTAGCAGTTTTGAACATACCGAACCCTTAG 1688
| ||||| || | ||||| ||||||| | ||||||||||| ||| | ||||
Sbjct 4109 TTGATATGTGGATTGTAGTGGATGGGAACAGTACAACTTTTGAACATAAGGAAACTTTAG 4050
Query 1689 AAGAAAGAATGTTTATGTTTAGGTTGAATAAGAAACTGGAACCTGATTTTGGAAA 1743
||||||||| ||| ||||||| || ||| || ||| || ||||||||||||
Sbjct 4049 AAGAAAGAACTTTTTTGTTTAGTTTTAATGTAAAGCTGAGACATGATTTTGGAAA 3995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14547717845575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |