Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq234 84.2 7e-13 >seq234 Length=3234940 Score = 84.2 bits (92), Expect = 7e-13 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1235 GTTGATTGGCTCATTGAGATGGGTATCACCTCTGAAAAACAGTGGCTAACTGAAAATAAA 1294 ||||| ||||| || || | || || ||| ||||| |||||||||||| || ||||| Sbjct 2455801 GTTGACTGGCTTATGGAAAATGGCATAACCAGTGAAAGACAGTGGCTAACAGAGGATAAA 2455860 Query 1295 GAGAGCTACCGGAGCTTTCAGGCTACATCTTCAAACAACAGACAAGTAAAAGCAGCACTT 1354 ||| ||| | ||||| ||||| ||||| | | | || | |||||||| | Sbjct 2455861 GAGTCTTACAGACATTTTCAAGCTACTTCTTCTACATCCCGTCAGATCAAAGCAGCTATA 2455920 Query 1355 GAAAATGCCCGAGCAGAAATG 1375 |||||||||||||| |||||| Sbjct 2455921 GAAAATGCCCGAGCTGAAATG 2455941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16303961010870