Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_014468.1
Length=4286
Score E
Sequences producing significant alignments: (Bits) Value
seq86691 428 1e-116
seq99286 381 2e-102
>seq86691
Length=5340
Score = 428 bits (474), Expect = 1e-116
Identities = 511/693 (74%), Gaps = 29/693 (4%)
Strand=Plus/Plus
Query 2677 GGTGCCGATGGAGTGGGTAATGCCTCAGGAAATTGGCATTACGATTCCGTTTGGATGGAC 2736
|||||||||| ||||| | |||| |||||||||| || ||||||| ||||||| |
Sbjct 4172 GGTGCCGATGCCGTGGGGAGCTCCTCGGGAAATTGGCGTTGCGATTCCAAATGGATGGGC 4231
Query 2737 GGCGCTGTCATCACCAAGTCCACCCGAACCTGGAGCCTGCCCGCCTACAACAACCACCTC 2796
| || |||||||||||||| | |||||| ||||||| ||||||| ||||||
Sbjct 4232 AACCACGTGCTCACCAAGTCCACCGGGACCTGGGTCCTGCCCAGCTACAACCACCACCAG 4291
Query 2797 TACCGCCAGATCCAGTCCAGCGG---CACCGGAGACGGCACGTACTTTGGTTACAGCACG 2853
||| | ||| | || ||| |||| | | | || | || | ||| ||
Sbjct 4292 TACAAGCGCATCGACTCACACGGAGCCACCAGCAATGACAATTTCTACAGCTACTCTACT 4351
Query 2854 CCTTGGGGATACTTCGATTTCAATCGATTCCACTGCCACTTTTCTCCCAGGGACTGGCAG 2913
|||||||||||||| || || || || ||||| | ||||||||| ||| | |||||||||
Sbjct 4352 CCTTGGGGATACTTTGACTTTAACCGCTTCCAGTACCACTTTTCACCCCGAGACTGGCAG 4411
Query 2914 CGGCTCATCAACAACCACTGGGGCATCCGCCCCAAGCGGCTCCACTTTAAGCTCTTCAAC 2973
| || |||||||| | ||||| ||||| |||||| | || ||| ||||| ||||||
Sbjct 4412 GGCTTCGTCAACAACAATTGGGGTATCCGGCCCAAGAGACTTTCCTTCAAGCTGTTCAAC 4471
Query 2974 ATCCAGGTCAAGGAGGTCACGACGACCGACGGCACCACGACCATCGCCAACAACCTCACC 3033
||||||| ||||||||||| ||| || || ||||||||||| |||| |||||||||
Sbjct 4472 GTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAACCTCACC 4531
Query 3034 AGCACCATACAGGTCTTTGCGGACACGGAGTACCAGCTCCCGTACGTGCTCGGCAACGCC 3093
|||||||| ||||||||||||||| |||| | |||| ||||| ||||||| ||||||||
Sbjct 4532 AGCACCATCCAGGTCTTTGCGGACGCGGACTGCCAGTTCCCGCACGTGCTAGGCAACGCG 4591
Query 3094 CACGAGGGCTGCCTGCCGCCGTTCCCGGCGGACGTCTTCATGCTGCCGCAGTACGCGTAC 3153
|||||||| ||||| || ||||| |||||||||| |||| |||||||| |
Sbjct 4592 CACGAGGGAACGCTGCCTCCCTTCCC----GACGTCTTCACCGTGCCCCAGTACGCCGA- 4646
Query 3154 CTGACGCTCAACGCCAACCCCACGAACCAGGGCGCGGCCGCGCTCAGCCTGCCGCAGAGC 3213
||| ||||||| ||| || | || | |||| || ||||
Sbjct 4647 CTGCAGCTCAAC------------AACGGGGACAAAGC----CACAGCGCGCAGCAG--- 4687
Query 3214 GCCTTCTACTGCCTGGAGTACTTTCCGAGCCAGATGCTGAGGACCGGGAACAACTTCTCG 3273
||||| |||||| | |||| | | ||||||||||||| ||||||| ||||||| | |
Sbjct 4688 --CTTCTGCTGCCTCGGGTACATGCGGAGCCAGATGCTGCGGACCGGCAACAACTACGCC 4745
Query 3274 TTCAGCTACGAGTTCGAGAAGCTGCCCTTCCACTCGATGTTCATGCACAGCCAGAGCCTG 3333
|||| ||| |||| ||| | | |||| |||| ||||| |||||||| ||||||||||
Sbjct 4746 TTCATGTACCAGTTTGAGGACGTACCCTCTCACTGGATGTACATGCACATCCAGAGCCTG 4805
Query 3334 GACCGGCTCATGAACCCGCTCATCGACCAGTAC 3366
|||| || ||||| ||| |||| |||||||||
Sbjct 4806 GACCACCTGATGAAGCCGTTCATGGACCAGTAC 4838
Score = 260 bits (288), Expect = 4e-66
Identities = 506/738 (69%), Gaps = 26/738 (4%)
Strand=Plus/Plus
Query 848 TACATGGCGCTCGTCAGGTGGCTCGTGGACAACGGCATCGCGACCGAGCGCGAGTGGATG 907
||||||| |||||| | ||||| ||||| | |||||| || | ||| || | ||||
Sbjct 2264 TACATGGAGCTCGTTAACTGGCTGGTGGAGATCGGCATTACGTCAGAGAGCAAC-GGATT 2322
Query 908 CGCGAGGACTCGGA--CGGGTACCTGAGCTACAACGCCACGGGCGCCACGCGCGCCCAGA 965
| ||| | ||| | ||| || |||||||| ||||||| | ||| || |
Sbjct 2323 CAGGAGAAGCAGGAATCCTGTATCTCT--TACAACGCGACGGGCGATGCCCGCTTGCAAA 2380
Query 966 TCAAGGCCGCGCTCGACAACGCGGCCCGCATCATGGTCAACACGAAGACGGCCGCCGACT 1025
|||| | || || |||||||| | || ||| ||| | || | |||||| | |||
Sbjct 2381 ACAAGTCGGCTCTGGACAACGCCGGCCAAATCGTGGGCCTGACCACCACGGCCTCAGACG 2440
Query 1026 ACCTGGTCGGCAGGAACCCGCCCCTCGA---CGTGGAGGACAACAGGATCTACCGGCTGT 1082
|| |||||| |||| || | | | | |||||| || | ||| | | | |
Sbjct 2441 GCCGGGTCGGTT-----CCGCACCGCCAGAGCATCGAGGACGACCGCATCCGCTGCATCT 2495
Query 1083 TTCGCATGAACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGCA 1142
||| | | |||||| || ||| |||||||| ||| |||| |||| | ||||||||| |
Sbjct 2496 TTCACCTCCACGGCTGCGGCCCGGCCTACGCCGGCTCCGTGGTGCTGGCCTGGTGCCGGA 2555
Query 1143 CCGGCTTCGGCAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACGA 1202
| ||| |||| ||| ||||||||||||| || || || | || || ||||| |
Sbjct 2556 GAAAGTCTGGCCAGCGGAACGCCGTCTGGCTCTTTGGACCTGCGCCCACGGGAAAGACCA 2615
Query 1203 ACCTCGCCGAGGCCATCAGC-CACTCGGTGCCCTTCTACGGCTGCGTCAACTGGACCAAC 1261
| | || | | | | | || || | |||||||| || || ||||||||||||||| |
Sbjct 2616 GCGTTGCGGTGTCTA-CTGCGCATGCTGTGCCCTTTTATGGGCGCGTCAACTGGACCAGC 2674
Query 1262 GAGAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAG 1321
|||||||| | || || || || |||||||||| | | || |||||||||||||||| |
Sbjct 2675 GAGAACTTTCTCTCCAT-GATTGTGTGGACAAGACGGTGATTTGGTGGGAGGAGGGCACG 2733
Query 1322 ATGACGTCCAAGGTCGTCGAGAGCGCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGTC 1381
||| || |||| ||||| ||| ||| |||||||||| || ||| ||| | ||
Sbjct 2734 ATGGCGGCCAAAGTCGTGGAGTCGGCCGAGGCCATCCT-GGGGGCTCGGCTGTGTGAGTG 2792
Query 1382 GACCAGAAGTGCAAGAACTCGCAGCAGATCGAGCCCACGCCCGTCATNNNNNNNNNNNNN 1441
|||||||| |||||| ||||||||||| || ||||| || |||||
Sbjct 2793 GACCAGAAATGCAAG-CCTCGCAGCAGACGGAACCCACACCGGTCATCATCACCTCCAAC 2851
Query 1442 NNNNACATGTGCGAGGTCGTCGACGGGAACTCGACCACGTTCGAGCACCGGCAGCCGCTC 1501
|||||| || || | | ||||| ||||||| || || || |||| |||||| |
Sbjct 2852 ACCAACATGTCCGTGGCCATTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTA 2911
Query 1502 GAGGACAGGATGTTCAAGTTCGAGCTCAC----CGTCAGGCTGCAGCCCACCTTCGGCAA 1557
||| | | ||||||||||| || || || ||| || ||| | || || || ||
Sbjct 2912 CAGGCCCGCATGTTCAAGTTTGAACTGACTTAGCGTTTGG-TGC--CAGACTTTGGGAAA 2968
Query 1558 GATCACCAAGCAGGAGGT 1575
| | || |||||||||||
Sbjct 2969 G-TGACTAAGCAGGAGGT 2985
>seq99286
Length=7566
Score = 381 bits (422), Expect = 2e-102
Identities = 538/751 (72%), Gaps = 45/751 (6%)
Strand=Plus/Plus
Query 2636 TGGCTGCGGGTGGTGGCGGACCAGTGGGCGACGATGCACAAGGTGCCGATGGAGTGGGTA 2695
||||||| || ||||| |||||||| |||| | || |||||| ||||||||
Sbjct 5648 TGGCTGCAGGATGTGGCTCACCAGTGGACGACAACATGCAGTGTGCCGCCGGAGTGGGCT 5707
Query 2696 ATGCCTCAGGAAATTGGCATTACGATTCCGTTTGGATGGACGGCGCTGTCATCACCAAGT 2755
||||| || |||||||| |||| || ||||||| | | |||| || ||||
Sbjct 5708 CTGCCTGCGGTGATTGGCATGGCGATACCAGGTGGATGGGAGACCTCATCATTACAAAGT 5767
Query 2756 CCACCCGAACCTGGAGCCTGCCCGCCTACAACAACCACCTCTACCGCCAGATC--CAGT- 2812
||||| | ||| || ||||||| ||| ||||||||| ||||| | | || | ||||
Sbjct 5768 CCACCTGGACCGGGGTCCTGCCCACCTT-AACAACCACGTCTACAGGCGGACCACCAGTT 5826
Query 2813 CCAGCGGCACCGGAGACGGCA---CGTACTTTGGTTACAGCACGCCTTGGGGA----TAC 2865
||| ||||| | | || || | ||||||||||||||||| || || || |||
Sbjct 5827 CCACCGGCATCAGCAACAACAACACCTACTTTGGTTACAGCAC-CCGAGGAGAGCTGTAC 5885
Query 2866 TTCGATTTCAATCGATTCCACTGCCACTTTTCTCCCAGGGACTGGCAGCGGCTCATCAAC 2925
|| || ||||| ||||| ||||||||| || | |||||||||| ||| ||||
Sbjct 5886 TTTGACTTCAA------CCACTTCCACTTTTCATCCCGAGACTGGCAGCATCTCGTCAAT 5939
Query 2926 AACCACTGGGGCATCCGCCCCAAGCGGCTCCACTTTAAGCTCTTCAACATCCAGGTCAAG 2985
||| ||||||| |||| |||||| | ||| || ||| | |||| ||| | ||||||
Sbjct 5940 AACAACTGGGGTGTCCGGCCCAAGTGACTCGGTTTCAAGTTATTCACCATATAAGTCAAG 5999
Query 2986 GAGGTCACGACGACCGACGGCACCACGACCATCGCCAACAACCTCACCAGCACCATACAG 3045
||||||||||| |||| |||| | |||||||||||| |||||||||||||||| |||
Sbjct 6000 GAGGTCACGACAGTCGACAGCACAAAGACCATCGCCAATGACCTCACCAGCACCATCCAG 6059
Query 3046 GTCTTTGCGG--ACACGGAGTACCAGCTCCCGTACGTGCTCGGCAACGCCCACGAGGGCT 3103
|| |||| || ||||||| | | |||||||| |||| ||||| |||||||| || |
Sbjct 6060 GTGTTTGTGGACACACGGACTGTCGGCTCCCGTCCGTGACTGGCAATGCCCACGAAGGGT 6119
Query 3104 GCCTGCCGCCGTTCCCGGCGGACGTCTTCATGCTGCCGCAGTACGCGTACCTGACGCTCA 3163
|||| || || || ||||| | ||||| ||| |||| || |||| |||||||| |||
Sbjct 6120 GCCTACCCCCATTTCCGGCCTATGTCTTTATGATGCCTCAATACGGATACCTGACTTTCA 6179
Query 3164 ACGCCAACCCCACGAACCAGGGCGC--GGCCGCGCTCAGCCTGCCGCAGAGCGCCTTCTA 3221
| ||| |||| | |||| || ||| |||| ||| |||
Sbjct 6180 A---CAA-----------TGGGCACAATGCCGTGCCCAG---------GAGCACCTACTA 6216
Query 3222 CTGCCTGGAGTACTTTCCGAGCCAGATGCTGAGGACCGGGAACAACTTCTCGTTCAGCTA 3281
|| ||||||| |||||| || | ||||| || || || |||||||| | || || ||
Sbjct 6217 TTGTCTGGAGTGCTTTCCCAGAAAAATGCTAAGAACAGGCAACAACTTTGCCTTTAGGTA 6276
Query 3282 CGAGTTCGAGAAGCTGCCCTTCCACTCGATGTTCATGCACAGCCAGAGCCTGGACCGGCT 3341
||| || ||| || | || || || | ||||| ||| |||||||||||| ||||||||
Sbjct 6277 CGACTTTGAGGAGGTACCTTTTCAGTAGATGTACATACACAGCCAGAGCACTGACCGGCT 6336
Query 3342 CATGAACCCGCTCATCGACCAGTACCTCTGG 3372
||||||||||| | ||| ||||| | |||
Sbjct 6337 GATGAACCCGCTGTTGGACTAGTACTTGTGG 6367
Score = 183 bits (202), Expect = 8e-43
Identities = 226/309 (73%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 3829 CCGGGCATGGTCTGGCAGGACCGCGACATCTACCTGCAGGGCCCGATATGGGCCAAGATC 3888
|| |||||| |||||| || | ||||||||||| ||||||| ||| ||||||||| |
Sbjct 6810 CCTGGCATGAATTGGCAGAACTGAGACATCTACCTCCAGGGCCTGATCTGGGCCAAGGTT 6869
Query 3889 CCGGAGACGGACGGCCACTTCCACCCGTCCCCGCTCATGGGCGGCTTCGGGCTCAAGAAC 3948
|| | || ||||| ||||| | | ||| || |||||||| || || || ||||||||
Sbjct 6870 CCACACACTGACGGACACTTTTATCTGTCTCCTCTCATGGGGGGATTTGGTCTCAAGAAG 6929
Query 3949 CCGCCGCCGCAGATCCTCGTCAAGAACACGCCCGTGCCCGCCGTGCCGCCCACGACCTTC 4008
|| || || |||||||| ||||||||||| || || | |||| || || | |||
Sbjct 6930 CCCCCTCCTCAGATCCTGGTCAAGAACACCCCGGTTACTGCCGACCCTCCAGTGGAATTC 6989
Query 4009 ACACCGCAGAAGGTCAACTCCTTCATCACGCAGTACTCCACCGGCCAGGTCACCGTCGAG 4068
||| | ||| ||||| ||||||||| || || ||| || || || ||||| ||
Sbjct 6990 ACAAGTGACAAGCTCAACAGCTTCATCACTCAATATAGCACTGGACAAGTAACCGTGGAA 7049
Query 4069 ATCGAGTGGGAGCTGCGCAAGGAGAAGAGCAAGCGCTGGAACCCCGAGATCCAGTACACC 4128
|| | |||||||||| |||| | |||| | |||||||| || || || |||||
Sbjct 7050 ATTAAATGGGAGCTGCAGCTGGAGGACTCCAAGAGGTGGAACCCAGAAATTCAATACACT 7109
Query 4129 TCCAACTTC 4137
|||||||||
Sbjct 7110 TCCAACTTC 7118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13579320007500
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