Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_001401.2
Length=4679
Score E
Sequences producing significant alignments: (Bits) Value
seq875 484 2e-133
seq615 417 2e-113
>seq875
Length=186252
Score = 484 bits (536), Expect = 2e-133
Identities = 567/754 (75%), Gaps = 14/754 (2%)
Strand=Plus/Minus
Query 989 GTACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATTACCTCGGAGAAGCAGTGGAT 1048
|||||||||||| || ||||| ||||| || || ||||| || |||| ||| |||||
Sbjct 118268 GTACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGAT 118210
Query 1049 CCAGGAGGACCAGGCCTCATACATCTCCTTCAATGCGGCCTCCAACTCGCGGTCCCAAAT 1108
|||||| |||||| | | ||||| | ||| ||| | ||| | || || |||||
Sbjct 118209 TCAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAAT 118150
Query 1109 CAAGGCTGCCTTGGACAATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCCCGACTA 1168
|||| | || ||||||| || | || || |||||||||| || || ||| | |||||
Sbjct 118149 CAAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTA 118090
Query 1169 CCTGGT-GGGCCAGCAGCCCGTGGAGGACATTTCCAG--CAATCGGATTTATAAAATTTT 1225
|||||| ||| | ||| | | | || | || || ||| || | | || ||
Sbjct 118089 CCTGGTCGGGTCTGCATCGCCAG-AGCA----TCGAGGACAACCGCGTCCACCGCATCTT 118035
Query 1226 GGAACTAAACGGGTACGATCCCCAATATGCGGCTTCCGTCTTTCTGGGATGGGCCACGAA 1285
| || ||||| ||||| || ||||| | || || | ||||| ||| | ||||
Sbjct 118034 TCACCTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGC-CGAA 117976
Query 1286 -AAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACCA 1344
|||||| |||||| |||||||| ||||||| |||| ||||| | || || |||||||
Sbjct 117975 GAAAGTTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCA 117916
Query 1345 ACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAATG 1404
|||| |||| ||| || ||||| |||||||||| || ||| | || |||||||||| |
Sbjct 117915 ACATTGCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCG 117856
Query 1405 AGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAGA 1464
||||||||| ||||| || ||||| ||||||| ||||| | |||||||||||| ||||
Sbjct 117855 AGAACTTTCTCTTCAT-GATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGA 117797
Query 1465 TGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTGG 1524
|||| ||||||||| ||||||||||||| ||||| || || | | || || | ||||
Sbjct 117796 TGACGGCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCAG-TGTGAGTGG 117738
Query 1525 ACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAACA 1584
|||||||||||||| ||||| |||| || || || || || ||| ||||||||||||
Sbjct 117737 ACCAGAAATGCAAG-CCTCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACA 117679
Query 1585 CCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTGC 1644
|||||||||||| || | |||||| ||||| | |||||| |||||||| |||||||| |
Sbjct 117678 CCAACATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTAC 117619
Query 1645 AAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGAAGGTCA 1704
| ||||| |||||||| || ||||| || |||| |||| | ||||||||||| || |
Sbjct 117618 AGGACCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGA 117559
Query 1705 CCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGC 1738
| |||| ||| ||||||||||||||| |||||
Sbjct 117558 CTAAGCGGGAGGTCAAAGACTTTTTCGCCTGGGC 117525
Score = 298 bits (330), Expect = 2e-77
Identities = 478/680 (70%), Gaps = 11/680 (2%)
Strand=Plus/Minus
Query 2850 GGGCGCCGACGGAGTGGGTAATTCCTCGGGAAATTGGCATTGCGATTCCACATGGATGGG 2909
||| | ||| | |||||| | |||||||||||||||| |||| |||||| |||||||||
Sbjct 116364 GGGTGACGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGG 116305
Query 2910 CGACAGAGTCATCACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCT 2969
| || || ||||| | || | ||||||| |||||||| ||||||| ||||||
Sbjct 116304 CAACCACGTGCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCA-CTACAACCACCACCA 116246
Query 2970 CTACAAACAAATTTCCAGCCAATCAGGAGCCTC---GAACGACAATCACTACTTTGGCTA 3026
||||| | | || | ||| |||||| | || |||||| |||| ||||
Sbjct 116245 GTACAAGCGCA--TCGACTCAA-AGGGAGCCACCAGCAAGGACAATTTCTAC---AGCTA 116192
Query 3027 CAGCACCCCTTGGGGGTATTTTGACTTCAACAGATTCCACTGCCACTTTTCACCACGTGA 3086
| || || ||||| || |||||||| ||| | ||||| | | |||||||||| || ||
Sbjct 116191 CTCTACTCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGA 116133
Query 3087 CTGGCAAAGACTCATCAACAACAACTGGGGATTCCGACCCAAGAGACTCAACTTCAAGCT 3146
|||||| | || |||| |||| ||||| || | |||||||||| |||||||||
Sbjct 116132 CTGGCAGTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCTTCAAGCT 116073
Query 3147 CTTTAACATTCAAGTCAAAGAGGTCACGCAGAATGACGGTACGACGACGATTGCCAATAA 3206
|||||| | || || || |||||||| | | || || | ||||| || |||||||
Sbjct 116072 GTTTAACGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAA 116013
Query 3207 CCTTACCAGCACGGTTCAGGTGTTTACTGACTCGGAGTACCAGCTCCCGTACGTCCTCGG 3266
||| |||||||| | ||||| ||| | |||||||| |||||| ||| | |||| || ||
Sbjct 116012 CCTCACCAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGG 115953
Query 3267 CTCGGCGCATCAAGGATGCCTCCCGCCGTTCCCAGCAGACGTCTTCATGGTGCCACAGTA 3326
| ||||| | ||| || || || ||||| || | ||||||| ||| || |||||
Sbjct 115952 CAACGCGCACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTA 115893
Query 3327 TGGATACCTCACCCTGAACAACGGGAGTCAGGCAGTAGGACGCTCTTCATTTTACTGCCT 3386
| ||| ||| || ||||||||| | || | || ||| || ||||||||
Sbjct 115892 CGCCTACGACACGCTCAACAACGGGGACAACGCCGCAGCTCGCAGCAGCTTCTACTGCCT 115833
Query 3387 GGAGTACTTTCCTTCTCAGATGCTGCGTACCGGAAACAACTTTACCTTCAGCTACACTTT 3446
|||||| | || ||||||||||| | || ||||||| ||| || ||| ||
Sbjct 115832 CGAGTACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACGTACGAGTT 115773
Query 3447 TGAGGACGTTCCTTTCCACAGCAGCTACGCTCACAGCCAGAGTCTGGACCGTCTCATGAA 3506
||||||||| || || ||| | ||| ||| |||||| || ||| || | ||
Sbjct 115772 TGAGGACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCACCTGGTTAA 115713
Query 3507 TCCTCTCATCGACCAGTACC 3526
|| |||| |||| |||||
Sbjct 115712 CCCGTTCATGGACCGGTACC 115693
Score = 197 bits (218), Expect = 4e-47
Identities = 343/492 (70%), Gaps = 15/492 (3%)
Strand=Plus/Minus
Query 2150 CAATGTGGATTTGGATGACTGCATCTTTGAACAATAAATGATTTAAATCAGGTATGGCTG 2209
|||||| ||| | || |||||| ||||||| | ||| | ||| ||| ||||||||
Sbjct 117052 CAATGTTGATCTCAATAACTGCAATAAAGAACAATGATTGACTCAAA-CAGATATGGCTG 116994
Query 2210 CCGATGGTTATCTTCCAGATTGGCTCGAGGACACTCTCTCTGAAGGAATAAGACAGTGG- 2268
||||| || |||||| ||| | ||||||||| ||||||| || | ||||||
Sbjct 116993 ---ATGGTCATTTTCCAGGCTGGTTGGAGGACACTTTCTCTGAGGGTCGGCGCCAGTGGA 116937
Query 2269 -TGGAAGCTCAAACCTGGCCCACCACCACCAAAGCCCGCAGAGCGGCATAAGGACGACAG 2327
| || || || |||| | || ||| ||| |||| || | |||
Sbjct 116936 ATAGATGC--AAGGCTGGAGCGCCCAAACCGCGGCCTCACCAGCGTCACCAAGACTCTTC 116879
Query 2328 CAGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGG 2387
||||||| || ||||| || || || || |||||||| ||||| || || || |||||
Sbjct 116878 TCGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGACCGTTCAATGGTCTGGATAAGGG 116819
Query 2388 AGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACGACAAAGCCTACGACCGGCA 2447
||| | ||||| |||||||||| || || ||||||| | | |||| | |||
Sbjct 116818 AGACCGGGTCAGTCGCGCAGACGCCGTCGCTCTAGAGCACGTC---GGCTACAGCGAGCA 116762
Query 2448 GCTCGACAGCGGAGACAACCCGTACCTCAAGTACAACCACGCCGACGCGGAGTTTCAGGA 2507
|||||| ||||||||||| |||||||||| |||||| |||||| || || |||||
Sbjct 116761 GCTCGAGGCGGGAGACAACCCCTACCTCAAGTGCAACCATGCCGACAGAGAATTCCAGGA 116702
Query 2508 GCGCCTTAAAGAAGATACGTCTTTTGGGGGCAACCTCGGACGAGCAGTCTTCCAGGCGAA 2567
| | || || || | ||||||| | ||||||||| |||||||||| ||||| ||
Sbjct 116701 GAAGCACTCTGACGACACCTGTTTTGGGAGAAACCTCGGAAGAGCAGTCTTTCAGGCCAA 116642
Query 2568 AAAGAGGGTTCTTGAACCTCTGGGCCTGGTTGA---GGAACCTGTTAAGACGGCTCCGGG 2624
|||| | | ||||| ||| | ||||| ||||| ||| || | || |||||| ||
Sbjct 116641 AAAGCGACTGCTTGAGCCTTTTGGCCTCGTTGAACCAGAAACTCCTCGGA-GGCTCCTGG 116583
Query 2625 AAAAAAGAGGCC 2636
| ||||||||
Sbjct 116582 GAGCAAGAGGCC 116571
Score = 138 bits (152), Expect = 3e-29
Identities = 212/297 (71%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 4009 GGCATGGTCTGGCAGGACAGAGATGTGTACCTTCAGGGGCCCATCTGGGCAAAGATTCCA 4068
||||||||||||||| || | | | ||||| ||||| || |||||||| ||||||||
Sbjct 115252 GGCATGGTCTGGCAGAACCGCGGCATTTACCTGCAGGGCCCGATCTGGGCCAAGATTCCC 115193
Query 4069 CACACGGACGGACATTTTCACCCCTCTCCCCTCATGGGTGGATTCGGACTTAAACACCCT 4128
||||| | ||| || ||||| || || |||||||| |||||||| || | | ||
Sbjct 115192 CACACAGGCGGCAGCTTCCACCCGTCCCCGCTCATGGGAGGATTCGG-GTTCAGGAAGCT 115134
Query 4129 CCTCCACAGATTCTCATCAAGAACACCCCGGTACCTGCGAATCCT-TCGACCACCTTCAG 4187
||||| |||| |||||| || || | | ||| || || |||||| || | || ||
Sbjct 115133 CCTCCTCAGA-TCTCATAAAAAATATGCTGGTTCCCGCCAATCCTCCCGTCGACTTTGCC 115075
Query 4188 TGCGGCAAAGTTTGCTTCCTTCATCACACAGTACTCCACGGGACAGGTCAGCGTGGAGAT 4247
| || ||||| |||||||| ||| || ||| |||||||| | || ||| |
Sbjct 115074 CCCAGC-AAGTTCCAGAGCTTCATCAACCAGGACAGCACTGGACAGGTGACAGTAGAGCT 115016
Query 4248 CGAGTGGGAGCTGCAGAAGGAAAACAGCAAACGCTGGAATCCCGAAATTCAGTACAC 4304
|||||| |||||||| ||| || || ||||||| ||||| | ||||||||
Sbjct 115015 TGAGTGGCAGCTGCAGCGGGAGGACTCGAAGTGCTGGAACCCCGAGGTGCAGTACAC 114959
>seq615
Length=480679
Score = 417 bits (462), Expect = 2e-113
Identities = 361/446 (81%), Gaps = 1/446 (0%)
Strand=Plus/Plus
Query 1284 AAAAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACC 1343
||||||||||||||||||||| |||||||||| ||||| |||| || ||||| ||||||
Sbjct 3940 AAAAAGTTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCGGCAAGACC 3999
Query 1344 AACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAAT 1403
||||| |||||||| || ||||| | ||||||||||| || ||||| | ||||||||||
Sbjct 4000 AACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCTGGACCAAT 4059
Query 1404 GAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAG 1463
||||| |||||||| |||||||| | ||||||||||||||| ||||||||||| | |||
Sbjct 4060 GAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGGAGTGCAAG 4118
Query 1464 ATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTG 1523
||||| ||||||||||||||||| ||||| ||||| | || || | ||||| ||
Sbjct 4119 ATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGGTGCAAGTC 4178
Query 1524 GACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAAC 1583
|||||||||||||||||| | ||||| ||||| |||| || ||| |||||||| ||
Sbjct 4179 AACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCACCTCCTAC 4238
Query 1584 ACCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTG 1643
| |||| |||||| || || ||||||||||| | ||| || ||||||||||||||| ||
Sbjct 4239 ATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGCAGCCGCTG 4298
Query 1644 CAAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGAAGGTC 1703
|| || ||||||||||||||||||| || ||| || ||| | | |||||||| ||
Sbjct 4299 CAGGATTGGATGTTCAAATTTGAACTAACGCGCTGTTTGGCGCCAGGTTTTGGGAAAGTG 4358
Query 1704 ACCAAGCAGGAAGTCAAAGACTTTTT 1729
|| ||| || ||||||| ||| ||
Sbjct 4359 ACTAAGTGAGAGGTCAAAGGCTTCTT 4384
Score = 253 bits (280), Expect = 6e-64
Identities = 462/664 (70%), Gaps = 38/664 (6%)
Strand=Plus/Plus
Query 2816 CAGGCAGTGGCGCACCAATGGCAGACAATAACGAGGGCGCCGACGGAGTGGGTAATTCCT 2875
|||| ||||| ||||| ||| |||| | | | ||||||||||||| | |||
Sbjct 5587 CAGGAGGTGGCTCACCAGTGG---ACAACATGCGGTGTTCCGACGGAGTGGGCTCTGCCT 5643
Query 2876 CGGGAAATTGGCATTGCGATTCCACATGGATGGGCGACAGAGTCATCACCACCAGCACCC 2935
| |||||||| | ||| ||||||||||||| ||| | ||||| || | ||| |
Sbjct 5644 GCAGTGATTGGCATGGAGATACCACATGGATGGGAGACCGTGTCATTACAAAGTCCACAC 5703
Query 2936 GAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACAAACAAATTTCCAGC-CAATCA 2994
| || || |||||||||||||||||||||| |||||| | || ||||| | | |
Sbjct 5704 GGACAGGGATCCTGCCCACCTACAACAACCACATCTACAGGCGGATCACCAGCTCCACCG 5763
Query 2995 GGAGCCTCGAACGACAATCACTACTTTGGCTACAGCACCCCTTGGGGGTATTTTGACTTC 3054
| | | | |||||||| ||||||||| || | || | ||||||||||||
Sbjct 5764 GCATCAGC-AACGACAACACCTACTTTGGTTAGG------CGTGCTG-TATTTTGACTTC 5815
Query 3055 AACAGATTCCACTGCCACTTTTCACCACGTGACTGGCAAAGACTCATCAACAACAACTGG 3114
||| | |||||||||||||||| ||| || |||||| | | ||| |||| |||| ||||
Sbjct 5816 AACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGTCTCGTCAATAACAGCTGG 5875
Query 3115 GGATTCCGACCCAAGAGACTCAACTTCAAGCTCTTTAACATTCAAGTCAAAGAGGTCACG 3174
|| |||| || ||| |||| |||||| | || | ||| |||||||| |||||||||
Sbjct 5876 GGTATCCGGCCTAAGCAACTCGGTTTCAAGTTATTCACCATACAAGTCAAGGAGGTCACG 5935
Query 3175 -CAGAATGACGGTACGACGACGATTGCCAATAACCTTACCAGCACGGTTCAGGTGTTTAC 3233
||| || | || | ||| || ||||||||||| |||||||| | |||||||||
Sbjct 5936 ACAG-TCAACAGCACAAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTGT 5994
Query 3234 TG--ACTCGGAGTACCAGCTCCCGTACGTCCTCGGCTCG----GCGCATCAAGGATGCCT 3287
| || |||| | |||||||| || ||| | || | || || |||| |||||
Sbjct 5995 GGACACACGGACTGTCAGCTCCC--AC--CCTTGACTGGCAATGCCCACGAAGGGTGCCT 6050
Query 3288 CCCGCCGTTCCCAGCAGACGTCTTCATGGTGCCACAGTATGGATACCTCACCCTGAACAA 3347
|| || || || || ||||||| |||||||| || || |||| || || | |||||
Sbjct 6051 ACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACAGATAACTGACTTTCAACAA 6110
Query 3348 CGGG-----AGTCAGG--CAGTAGGACGCTCTTCATTTTACTGCCTGGAGTACTTTCCTT 3400
|||| ||| | ||| || || || | || || | |||| ||||||
Sbjct 6111 CGGGCACAATGTCGTGCCCAGGAGCAC---CTAC----TATTGTCGGGAGCGCTTTCCCA 6163
Query 3401 CTCAGATGCTGCGTACCGGAAACAACTTTACCTTCAGCTACACTTTTGAGGACGTTCCTT 3460
| ||||| | || || ||||||||| ||||| |||| |||||||| || ||||
Sbjct 6164 GCAAAATGCTAAGAACAGGCAACAACTTTGCCTTCGGCTATGACTTTGAGGAGGTACCTT 6223
Query 3461 TCCA 3464
| ||
Sbjct 6224 TTCA 6227
Score = 176 bits (194), Expect = 1e-40
Identities = 242/336 (72%), Gaps = 2/336 (1%)
Strand=Plus/Plus
Query 3983 ATGTCAACACACAAGGCGTTCTTCCAGGCATGGTCTGGCAGGACAGAGATGTGTACCTTC 4042
|||||||| | | || || || || |||||| |||||| || |||| | ||||| |
Sbjct 6726 ATGTCAACTCTCTCGGGGTGCTGCCTGGCATGAATTGGCAGAACCGAGACATCTACCTCC 6785
Query 4043 AGGGGCCCATCTGGGCAAAGATTCCACACACGGACGGACATTTTCACCCCTCTCCCCTCA 4102
|| | | |||||||| ||| |||||||||| ||||| || ||||| | ||||| ||||
Sbjct 6786 AGAGCCTGATCTGGGCCAAGGTTCCACACACTGACGGGCACTTTCATCTGTCTCCTCTCA 6845
Query 4103 TGGGTGGATTCGGACTTAAACACCCTCCTCCACAGATTCTCATCAAGAACACCCCGGTAC 4162
|||| |||||||| || || | | |||| ||||| || |||||||||||||||| |
Sbjct 6846 TGGGGGGATTCGGTCTCAAGAAGGCCCCTCTTCAGATCCTGGTCAAGAACACCCCGGTTC 6905
Query 4163 CTGCGAATCCTTC-GACCACCTTCAGTGCGGCAAAGTTTGCTTCCTTCATCACACAGTAC 4221
|||| ||||| | | | || ||| | ||| | ||||||||| |||||
Sbjct 6906 CTGCCGATCCTCCAGTGGAATTTACAAGCGTC-AAGCTCAACAGCTTCATCACTCAGTAT 6964
Query 4222 TCCACGGGACAGGTCAGCGTGGAGATCGAGTGGGAGCTGCAGAAGGAAAACAGCAAACGC 4281
||| |||| | | |||||| || | | |||||||||| ||| || ||| |
Sbjct 6965 AGCACCAGACAAGAAACCGTGGAAATTAAATAGGAGCTGCAGCTGGAGGACTCCAAGAGG 7024
Query 4282 TGGAATCCCGAAATTCAGTACACTTCCAACTACAAC 4317
||||| || |||||||| ||||||||||||| ||||
Sbjct 7025 TGGAACCCAGAAATTCAATACACTTCCAACTTCAAC 7060
Score = 123 bits (136), Expect = 7e-25
Identities = 180/252 (71%), Gaps = 12/252 (5%)
Strand=Plus/Plus
Query 2330 GGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGAG 2389
||||||| || ||||| || || || || ||||| ||| ||||| | || || || ||||
Sbjct 5092 GGGGTCTGGTCCTTCCGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGGAG 5151
Query 2390 AGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACGACAAAGCCTACGACCG---GC 2446
| |||| ||| ||||||||| |||| ||||| ||| | | || |||| ||
Sbjct 5152 ACGCGGTTAACAGAGCAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGAGC 5208
Query 2447 AGCTCGACAGCGG-----AGACAACCCGTACCTCAAGTACAACCACGCCGACGCGGAGTT 2501
|||| || |||| |||||| || |||||||||| |||| || | ||| |||||
Sbjct 5209 AGCTGGAG-GCGGGAGACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGTT 5267
Query 2502 TCAGGAGCGCCTTAAAGAAGATACGTCTTTTGGGGGCAACCTCGGACGAGCAGTCTTCCA 2561
||| || || || | || ||||||||| | ||||||||| |||||||||||
Sbjct 5268 TCAAAAGAAGCTCTCTGACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCCA 5327
Query 2562 GGCGAAAAAGAG 2573
||| || |||||
Sbjct 5328 GGCCAAGAAGAG 5339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14850488624940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |