Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq875 484 2e-133 seq615 417 2e-113 >seq875 Length=186252 Score = 484 bits (536), Expect = 2e-133 Identities = 567/754 (75%), Gaps = 14/754 (2%) Strand=Plus/Minus Query 989 GTACATGGAGCTGGTCGGGTGGCTCGTGGACAAGGGGATTACCTCGGAGAAGCAGTGGAT 1048 |||||||||||| || ||||| ||||| || || ||||| || |||| ||| ||||| Sbjct 118268 GTACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGAT 118210 Query 1049 CCAGGAGGACCAGGCCTCATACATCTCCTTCAATGCGGCCTCCAACTCGCGGTCCCAAAT 1108 |||||| |||||| | | ||||| | ||| ||| | ||| | || || ||||| Sbjct 118209 TCAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAAT 118150 Query 1109 CAAGGCTGCCTTGGACAATGCGGGAAAGATTATGAGCCTGACTAAAACCGCCCCCGACTA 1168 |||| | || ||||||| || | || || |||||||||| || || ||| | ||||| Sbjct 118149 CAAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTA 118090 Query 1169 CCTGGT-GGGCCAGCAGCCCGTGGAGGACATTTCCAG--CAATCGGATTTATAAAATTTT 1225 |||||| ||| | ||| | | | || | || || ||| || | | || || Sbjct 118089 CCTGGTCGGGTCTGCATCGCCAG-AGCA----TCGAGGACAACCGCGTCCACCGCATCTT 118035 Query 1226 GGAACTAAACGGGTACGATCCCCAATATGCGGCTTCCGTCTTTCTGGGATGGGCCACGAA 1285 | || ||||| ||||| || ||||| | || || | ||||| ||| | |||| Sbjct 118034 TCACCTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGC-CGAA 117976 Query 1286 -AAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACCA 1344 |||||| |||||| |||||||| ||||||| |||| ||||| | || || ||||||| Sbjct 117975 GAAAGTTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCA 117916 Query 1345 ACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAATG 1404 |||| |||| ||| || ||||| |||||||||| || ||| | || |||||||||| | Sbjct 117915 ACATTGCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCG 117856 Query 1405 AGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAGA 1464 ||||||||| ||||| || ||||| ||||||| ||||| | |||||||||||| |||| Sbjct 117855 AGAACTTTCTCTTCAT-GATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGA 117797 Query 1465 TGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTGG 1524 |||| ||||||||| ||||||||||||| ||||| || || | | || || | |||| Sbjct 117796 TGACGGCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCAG-TGTGAGTGG 117738 Query 1525 ACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAACA 1584 |||||||||||||| ||||| |||| || || || || || ||| |||||||||||| Sbjct 117737 ACCAGAAATGCAAG-CCTCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACA 117679 Query 1585 CCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTGC 1644 |||||||||||| || | |||||| ||||| | |||||| |||||||| |||||||| | Sbjct 117678 CCAACATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTAC 117619 Query 1645 AAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGAAGGTCA 1704 | ||||| |||||||| || ||||| || |||| |||| | ||||||||||| || | Sbjct 117618 AGGACCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGA 117559 Query 1705 CCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGC 1738 | |||| ||| ||||||||||||||| ||||| Sbjct 117558 CTAAGCGGGAGGTCAAAGACTTTTTCGCCTGGGC 117525 Score = 298 bits (330), Expect = 2e-77 Identities = 478/680 (70%), Gaps = 11/680 (2%) Strand=Plus/Minus Query 2850 GGGCGCCGACGGAGTGGGTAATTCCTCGGGAAATTGGCATTGCGATTCCACATGGATGGG 2909 ||| | ||| | |||||| | |||||||||||||||| |||| |||||| ||||||||| Sbjct 116364 GGGTGACGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGG 116305 Query 2910 CGACAGAGTCATCACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCT 2969 | || || ||||| | || | ||||||| |||||||| ||||||| |||||| Sbjct 116304 CAACCACGTGCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCA-CTACAACCACCACCA 116246 Query 2970 CTACAAACAAATTTCCAGCCAATCAGGAGCCTC---GAACGACAATCACTACTTTGGCTA 3026 ||||| | | || | ||| |||||| | || |||||| |||| |||| Sbjct 116245 GTACAAGCGCA--TCGACTCAA-AGGGAGCCACCAGCAAGGACAATTTCTAC---AGCTA 116192 Query 3027 CAGCACCCCTTGGGGGTATTTTGACTTCAACAGATTCCACTGCCACTTTTCACCACGTGA 3086 | || || ||||| || |||||||| ||| | ||||| | | |||||||||| || || Sbjct 116191 CTCTACTCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGA 116133 Query 3087 CTGGCAAAGACTCATCAACAACAACTGGGGATTCCGACCCAAGAGACTCAACTTCAAGCT 3146 |||||| | || |||| |||| ||||| || | |||||||||| ||||||||| Sbjct 116132 CTGGCAGTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCTTCAAGCT 116073 Query 3147 CTTTAACATTCAAGTCAAAGAGGTCACGCAGAATGACGGTACGACGACGATTGCCAATAA 3206 |||||| | || || || |||||||| | | || || | ||||| || ||||||| Sbjct 116072 GTTTAACGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAA 116013 Query 3207 CCTTACCAGCACGGTTCAGGTGTTTACTGACTCGGAGTACCAGCTCCCGTACGTCCTCGG 3266 ||| |||||||| | ||||| ||| | |||||||| |||||| ||| | |||| || || Sbjct 116012 CCTCACCAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGG 115953 Query 3267 CTCGGCGCATCAAGGATGCCTCCCGCCGTTCCCAGCAGACGTCTTCATGGTGCCACAGTA 3326 | ||||| | ||| || || || ||||| || | ||||||| ||| || ||||| Sbjct 115952 CAACGCGCACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTA 115893 Query 3327 TGGATACCTCACCCTGAACAACGGGAGTCAGGCAGTAGGACGCTCTTCATTTTACTGCCT 3386 | ||| ||| || ||||||||| | || | || ||| || |||||||| Sbjct 115892 CGCCTACGACACGCTCAACAACGGGGACAACGCCGCAGCTCGCAGCAGCTTCTACTGCCT 115833 Query 3387 GGAGTACTTTCCTTCTCAGATGCTGCGTACCGGAAACAACTTTACCTTCAGCTACACTTT 3446 |||||| | || ||||||||||| | || ||||||| ||| || ||| || Sbjct 115832 CGAGTACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACGTACGAGTT 115773 Query 3447 TGAGGACGTTCCTTTCCACAGCAGCTACGCTCACAGCCAGAGTCTGGACCGTCTCATGAA 3506 ||||||||| || || ||| | ||| ||| |||||| || ||| || | || Sbjct 115772 TGAGGACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCACCTGGTTAA 115713 Query 3507 TCCTCTCATCGACCAGTACC 3526 || |||| |||| ||||| Sbjct 115712 CCCGTTCATGGACCGGTACC 115693 Score = 197 bits (218), Expect = 4e-47 Identities = 343/492 (70%), Gaps = 15/492 (3%) Strand=Plus/Minus Query 2150 CAATGTGGATTTGGATGACTGCATCTTTGAACAATAAATGATTTAAATCAGGTATGGCTG 2209 |||||| ||| | || |||||| ||||||| | ||| | ||| ||| |||||||| Sbjct 117052 CAATGTTGATCTCAATAACTGCAATAAAGAACAATGATTGACTCAAA-CAGATATGGCTG 116994 Query 2210 CCGATGGTTATCTTCCAGATTGGCTCGAGGACACTCTCTCTGAAGGAATAAGACAGTGG- 2268 ||||| || |||||| ||| | ||||||||| ||||||| || | |||||| Sbjct 116993 ---ATGGTCATTTTCCAGGCTGGTTGGAGGACACTTTCTCTGAGGGTCGGCGCCAGTGGA 116937 Query 2269 -TGGAAGCTCAAACCTGGCCCACCACCACCAAAGCCCGCAGAGCGGCATAAGGACGACAG 2327 | || || || |||| | || ||| ||| |||| || | ||| Sbjct 116936 ATAGATGC--AAGGCTGGAGCGCCCAAACCGCGGCCTCACCAGCGTCACCAAGACTCTTC 116879 Query 2328 CAGGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGG 2387 ||||||| || ||||| || || || || |||||||| ||||| || || || ||||| Sbjct 116878 TCGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGACCGTTCAATGGTCTGGATAAGGG 116819 Query 2388 AGAGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACGACAAAGCCTACGACCGGCA 2447 ||| | ||||| |||||||||| || || ||||||| | | |||| | ||| Sbjct 116818 AGACCGGGTCAGTCGCGCAGACGCCGTCGCTCTAGAGCACGTC---GGCTACAGCGAGCA 116762 Query 2448 GCTCGACAGCGGAGACAACCCGTACCTCAAGTACAACCACGCCGACGCGGAGTTTCAGGA 2507 |||||| ||||||||||| |||||||||| |||||| |||||| || || ||||| Sbjct 116761 GCTCGAGGCGGGAGACAACCCCTACCTCAAGTGCAACCATGCCGACAGAGAATTCCAGGA 116702 Query 2508 GCGCCTTAAAGAAGATACGTCTTTTGGGGGCAACCTCGGACGAGCAGTCTTCCAGGCGAA 2567 | | || || || | ||||||| | ||||||||| |||||||||| ||||| || Sbjct 116701 GAAGCACTCTGACGACACCTGTTTTGGGAGAAACCTCGGAAGAGCAGTCTTTCAGGCCAA 116642 Query 2568 AAAGAGGGTTCTTGAACCTCTGGGCCTGGTTGA---GGAACCTGTTAAGACGGCTCCGGG 2624 |||| | | ||||| ||| | ||||| ||||| ||| || | || |||||| || Sbjct 116641 AAAGCGACTGCTTGAGCCTTTTGGCCTCGTTGAACCAGAAACTCCTCGGA-GGCTCCTGG 116583 Query 2625 AAAAAAGAGGCC 2636 | |||||||| Sbjct 116582 GAGCAAGAGGCC 116571 Score = 138 bits (152), Expect = 3e-29 Identities = 212/297 (71%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 4009 GGCATGGTCTGGCAGGACAGAGATGTGTACCTTCAGGGGCCCATCTGGGCAAAGATTCCA 4068 ||||||||||||||| || | | | ||||| ||||| || |||||||| |||||||| Sbjct 115252 GGCATGGTCTGGCAGAACCGCGGCATTTACCTGCAGGGCCCGATCTGGGCCAAGATTCCC 115193 Query 4069 CACACGGACGGACATTTTCACCCCTCTCCCCTCATGGGTGGATTCGGACTTAAACACCCT 4128 ||||| | ||| || ||||| || || |||||||| |||||||| || | | || Sbjct 115192 CACACAGGCGGCAGCTTCCACCCGTCCCCGCTCATGGGAGGATTCGG-GTTCAGGAAGCT 115134 Query 4129 CCTCCACAGATTCTCATCAAGAACACCCCGGTACCTGCGAATCCT-TCGACCACCTTCAG 4187 ||||| |||| |||||| || || | | ||| || || |||||| || | || || Sbjct 115133 CCTCCTCAGA-TCTCATAAAAAATATGCTGGTTCCCGCCAATCCTCCCGTCGACTTTGCC 115075 Query 4188 TGCGGCAAAGTTTGCTTCCTTCATCACACAGTACTCCACGGGACAGGTCAGCGTGGAGAT 4247 | || ||||| |||||||| ||| || ||| |||||||| | || ||| | Sbjct 115074 CCCAGC-AAGTTCCAGAGCTTCATCAACCAGGACAGCACTGGACAGGTGACAGTAGAGCT 115016 Query 4248 CGAGTGGGAGCTGCAGAAGGAAAACAGCAAACGCTGGAATCCCGAAATTCAGTACAC 4304 |||||| |||||||| ||| || || ||||||| ||||| | |||||||| Sbjct 115015 TGAGTGGCAGCTGCAGCGGGAGGACTCGAAGTGCTGGAACCCCGAGGTGCAGTACAC 114959 >seq615 Length=480679 Score = 417 bits (462), Expect = 2e-113 Identities = 361/446 (81%), Gaps = 1/446 (0%) Strand=Plus/Plus Query 1284 AAAAAGTTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACC 1343 ||||||||||||||||||||| |||||||||| ||||| |||| || ||||| |||||| Sbjct 3940 AAAAAGTTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCGGCAAGACC 3999 Query 1344 AACATCGCGGAGGCCATAGCCCACACTGTGCCCTTCTACGGGTGCGTAAACTGGACCAAT 1403 ||||| |||||||| || ||||| | ||||||||||| || ||||| | |||||||||| Sbjct 4000 AACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCTGGACCAAT 4059 Query 1404 GAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGAAG 1463 ||||| |||||||| |||||||| | ||||||||||||||| ||||||||||| | ||| Sbjct 4060 GAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGGAGTGCAAG 4118 Query 1464 ATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCGTG 1523 ||||| ||||||||||||||||| ||||| ||||| | || || | ||||| || Sbjct 4119 ATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGGTGCAAGTC 4178 Query 1524 GACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCAAC 1583 |||||||||||||||||| | ||||| ||||| |||| || ||| |||||||| || Sbjct 4179 AACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCACCTCCTAC 4238 Query 1584 ACCAACATGTGCGCCGTGATTGACGGGAACTCAACGACCTTCGAACACCAGCAGCCGTTG 1643 | |||| |||||| || || ||||||||||| | ||| || ||||||||||||||| || Sbjct 4239 ATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGCAGCCGCTG 4298 Query 1644 CAAGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGATCATGACTTTGGGAAGGTC 1703 || || ||||||||||||||||||| || ||| || ||| | | |||||||| || Sbjct 4299 CAGGATTGGATGTTCAAATTTGAACTAACGCGCTGTTTGGCGCCAGGTTTTGGGAAAGTG 4358 Query 1704 ACCAAGCAGGAAGTCAAAGACTTTTT 1729 || ||| || ||||||| ||| || Sbjct 4359 ACTAAGTGAGAGGTCAAAGGCTTCTT 4384 Score = 253 bits (280), Expect = 6e-64 Identities = 462/664 (70%), Gaps = 38/664 (6%) Strand=Plus/Plus Query 2816 CAGGCAGTGGCGCACCAATGGCAGACAATAACGAGGGCGCCGACGGAGTGGGTAATTCCT 2875 |||| ||||| ||||| ||| |||| | | | ||||||||||||| | ||| Sbjct 5587 CAGGAGGTGGCTCACCAGTGG---ACAACATGCGGTGTTCCGACGGAGTGGGCTCTGCCT 5643 Query 2876 CGGGAAATTGGCATTGCGATTCCACATGGATGGGCGACAGAGTCATCACCACCAGCACCC 2935 | |||||||| | ||| ||||||||||||| ||| | ||||| || | ||| | Sbjct 5644 GCAGTGATTGGCATGGAGATACCACATGGATGGGAGACCGTGTCATTACAAAGTCCACAC 5703 Query 2936 GAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACAAACAAATTTCCAGC-CAATCA 2994 | || || |||||||||||||||||||||| |||||| | || ||||| | | | Sbjct 5704 GGACAGGGATCCTGCCCACCTACAACAACCACATCTACAGGCGGATCACCAGCTCCACCG 5763 Query 2995 GGAGCCTCGAACGACAATCACTACTTTGGCTACAGCACCCCTTGGGGGTATTTTGACTTC 3054 | | | | |||||||| ||||||||| || | || | |||||||||||| Sbjct 5764 GCATCAGC-AACGACAACACCTACTTTGGTTAGG------CGTGCTG-TATTTTGACTTC 5815 Query 3055 AACAGATTCCACTGCCACTTTTCACCACGTGACTGGCAAAGACTCATCAACAACAACTGG 3114 ||| | |||||||||||||||| ||| || |||||| | | ||| |||| |||| |||| Sbjct 5816 AACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGTCTCGTCAATAACAGCTGG 5875 Query 3115 GGATTCCGACCCAAGAGACTCAACTTCAAGCTCTTTAACATTCAAGTCAAAGAGGTCACG 3174 || |||| || ||| |||| |||||| | || | ||| |||||||| ||||||||| Sbjct 5876 GGTATCCGGCCTAAGCAACTCGGTTTCAAGTTATTCACCATACAAGTCAAGGAGGTCACG 5935 Query 3175 -CAGAATGACGGTACGACGACGATTGCCAATAACCTTACCAGCACGGTTCAGGTGTTTAC 3233 ||| || | || | ||| || ||||||||||| |||||||| | ||||||||| Sbjct 5936 ACAG-TCAACAGCACAAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTGT 5994 Query 3234 TG--ACTCGGAGTACCAGCTCCCGTACGTCCTCGGCTCG----GCGCATCAAGGATGCCT 3287 | || |||| | |||||||| || ||| | || | || || |||| ||||| Sbjct 5995 GGACACACGGACTGTCAGCTCCC--AC--CCTTGACTGGCAATGCCCACGAAGGGTGCCT 6050 Query 3288 CCCGCCGTTCCCAGCAGACGTCTTCATGGTGCCACAGTATGGATACCTCACCCTGAACAA 3347 || || || || || ||||||| |||||||| || || |||| || || | ||||| Sbjct 6051 ACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACAGATAACTGACTTTCAACAA 6110 Query 3348 CGGG-----AGTCAGG--CAGTAGGACGCTCTTCATTTTACTGCCTGGAGTACTTTCCTT 3400 |||| ||| | ||| || || || | || || | |||| |||||| Sbjct 6111 CGGGCACAATGTCGTGCCCAGGAGCAC---CTAC----TATTGTCGGGAGCGCTTTCCCA 6163 Query 3401 CTCAGATGCTGCGTACCGGAAACAACTTTACCTTCAGCTACACTTTTGAGGACGTTCCTT 3460 | ||||| | || || ||||||||| ||||| |||| |||||||| || |||| Sbjct 6164 GCAAAATGCTAAGAACAGGCAACAACTTTGCCTTCGGCTATGACTTTGAGGAGGTACCTT 6223 Query 3461 TCCA 3464 | || Sbjct 6224 TTCA 6227 Score = 176 bits (194), Expect = 1e-40 Identities = 242/336 (72%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 3983 ATGTCAACACACAAGGCGTTCTTCCAGGCATGGTCTGGCAGGACAGAGATGTGTACCTTC 4042 |||||||| | | || || || || |||||| |||||| || |||| | ||||| | Sbjct 6726 ATGTCAACTCTCTCGGGGTGCTGCCTGGCATGAATTGGCAGAACCGAGACATCTACCTCC 6785 Query 4043 AGGGGCCCATCTGGGCAAAGATTCCACACACGGACGGACATTTTCACCCCTCTCCCCTCA 4102 || | | |||||||| ||| |||||||||| ||||| || ||||| | ||||| |||| Sbjct 6786 AGAGCCTGATCTGGGCCAAGGTTCCACACACTGACGGGCACTTTCATCTGTCTCCTCTCA 6845 Query 4103 TGGGTGGATTCGGACTTAAACACCCTCCTCCACAGATTCTCATCAAGAACACCCCGGTAC 4162 |||| |||||||| || || | | |||| ||||| || |||||||||||||||| | Sbjct 6846 TGGGGGGATTCGGTCTCAAGAAGGCCCCTCTTCAGATCCTGGTCAAGAACACCCCGGTTC 6905 Query 4163 CTGCGAATCCTTC-GACCACCTTCAGTGCGGCAAAGTTTGCTTCCTTCATCACACAGTAC 4221 |||| ||||| | | | || ||| | ||| | ||||||||| ||||| Sbjct 6906 CTGCCGATCCTCCAGTGGAATTTACAAGCGTC-AAGCTCAACAGCTTCATCACTCAGTAT 6964 Query 4222 TCCACGGGACAGGTCAGCGTGGAGATCGAGTGGGAGCTGCAGAAGGAAAACAGCAAACGC 4281 ||| |||| | | |||||| || | | |||||||||| ||| || ||| | Sbjct 6965 AGCACCAGACAAGAAACCGTGGAAATTAAATAGGAGCTGCAGCTGGAGGACTCCAAGAGG 7024 Query 4282 TGGAATCCCGAAATTCAGTACACTTCCAACTACAAC 4317 ||||| || |||||||| ||||||||||||| |||| Sbjct 7025 TGGAACCCAGAAATTCAATACACTTCCAACTTCAAC 7060 Score = 123 bits (136), Expect = 7e-25 Identities = 180/252 (71%), Gaps = 12/252 (5%) Strand=Plus/Plus Query 2330 GGGGTCTTGTGCTTCCTGGGTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGAG 2389 ||||||| || ||||| || || || || ||||| ||| ||||| | || || || |||| Sbjct 5092 GGGGTCTGGTCCTTCCGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGGAG 5151 Query 2390 AGCCGGTCAACGAGGCAGACGCCGCGGCCCTCGAGCACGACAAAGCCTACGACCG---GC 2446 | |||| ||| ||||||||| |||| ||||| ||| | | || |||| || Sbjct 5152 ACGCGGTTAACAGAGCAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGAGC 5208 Query 2447 AGCTCGACAGCGG-----AGACAACCCGTACCTCAAGTACAACCACGCCGACGCGGAGTT 2501 |||| || |||| |||||| || |||||||||| |||| || | ||| ||||| Sbjct 5209 AGCTGGAG-GCGGGAGACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGTT 5267 Query 2502 TCAGGAGCGCCTTAAAGAAGATACGTCTTTTGGGGGCAACCTCGGACGAGCAGTCTTCCA 2561 ||| || || || | || ||||||||| | ||||||||| ||||||||||| Sbjct 5268 TCAAAAGAAGCTCTCTGACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCCA 5327 Query 2562 GGCGAAAAAGAG 2573 ||| || ||||| Sbjct 5328 GGCCAAGAAGAG 5339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14850488624940