Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_001729.1
Length=4726
Score E
Sequences producing significant alignments: (Bits) Value
seq875 477 3e-131
seq615 401 2e-108
>seq875
Length=186252
Score = 477 bits (528), Expect = 3e-131
Identities = 562/752 (75%), Gaps = 10/752 (1%)
Strand=Plus/Minus
Query 986 GTACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGAT 1045
|||||||||||| || ||||||||||| ||| || |||||||| | |||||||||
Sbjct 118268 GTACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGAT 118210
Query 1046 TCAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGAT 1105
||||||| |||||| | | ||||| | |||||| | ||| | || || || ||
Sbjct 118209 TCAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAAT 118150
Query 1106 CAAGGCCGCGCTGGACAATGCCTCCAAGATCATGAGCCTGACAAAGACGGCTCCGGACTA 1165
|||| | || |||||||| ||| ||| ||| |||||||||| |||||||| |||||||
Sbjct 118149 CAAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTA 118090
Query 1166 CCTGGTGGG--CAGCAACCCGCCGGAGGACATTACCAAAAATCGGATCTACCAAATCCTG 1223
|||||| || | ||| | ||| ||| ||| | || || || ||| ||| |
Sbjct 118089 CCTGGTCGGGTCTGCATC--GCCAGAG--CATCGAGGACAACCGCGTCCACCGCATCTTT 118034
Query 1224 GAGCTGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCTGGGCGCAAAAG 1283
| || ||||| ||||| ||| || || | ||| || | ||||||||| | ||
Sbjct 118033 CACCTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGCCGAAGA 117974
Query 1284 AAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAAC 1343
||||| || ||| |||||||| |||||||||||| || || | ||||| || ||||||
Sbjct 117973 AAGTTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCAAC 117914
Query 1344 ATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAG 1403
|| |||| || || ||||| || |||||||| || || | || |||||||||| |||
Sbjct 117913 ATTGCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCGAG 117854
Query 1404 AACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATG 1463
||||||| ||||| ||||| || ||||||| ||||| | |||||||||||||||||||
Sbjct 117853 AACTTTCTCTTCAT-GATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGATG 117795
Query 1464 ACGGCCAAGGTCGTGGAGAGCGCCAAGGCCATTCTGGGCGGAAGCAAGGTGCGCGTGGAC 1523
|||||||||||| ||||| ||||||||||| ||||| | | || || | ||||||
Sbjct 117794 ACGGCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCAG-TGTGAGTGGAC 117736
Query 1524 CAAAAGTGCAAGTCATCGGCCCAGATCGAACCCACTCCCGTGATCGTCACCTCCAACACC 1583
|| || |||||| | ||| |||| |||||||| || || ||| ||||||||||||||
Sbjct 117735 CAGAAATGCAAGCC-TCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACACC 117677
Query 1584 AACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCATCAGCAGCCGCTGCAG 1643
|||||||||| || | |||||| ||| | ||||| || || || |||||| | |||
Sbjct 117676 AACATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTACAG 117617
Query 1644 GACCGGATGTTTGAATTTGAACTTACCCGCCGTTTGGACCATGACTTTGGGAAGGTCACC 1703
||||| ||||| | || ||||| || ||||||||| | ||||||||||| || ||
Sbjct 117616 GACCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGACT 117557
Query 1704 AAACAGGAAGTAAAGGACTTTTTCCGGTGGGC 1735
|| | ||| || || ||||||||| |||||
Sbjct 117556 AAGCGGGAGGTCAAAGACTTTTTCGCCTGGGC 117525
Score = 259 bits (286), Expect = 1e-65
Identities = 432/617 (70%), Gaps = 7/617 (1%)
Strand=Plus/Minus
Query 2856 GGGTGCCGATGGAGTGGGTAATTCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGG 2915
||||| ||||| |||||| | ||||| |||||||||| |||| ||||| ||||| ||||
Sbjct 116364 GGGTGACGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGG 116305
Query 2916 CGACAGAGTCATCACCACCAGCACCAGAACCTGGGCCCTGCCCACTTACAACAACCATCT 2975
| || || ||||| | || | ||||||| |||||||||| ||||| |||| |
Sbjct 116304 CAACCACGTGCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCACT-ACAACCACCACCA 116246
Query 2976 CTACAAGCAAATCTCCAGCCAATCAGGAGCTTCAAACGACAACCACTACTTTGGCTACAG 3035
||||||| ||| | ||| ||||| | | | | || | | || |||||
Sbjct 116245 GTACAAGCGCATCGACT--CAAAG-GGAGCCACCAGCAAGGACAATTTCTACAGCTACTC 116189
Query 3036 CACCCCTTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTG 3095
|| || ||||| || |||||||||||| | ||||| | | |||| ||||| || |||||
Sbjct 116188 TACTCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGACTG 116130
Query 3096 GCAGCGACTCATTAACAACAACTGGGGATTCCGGCCCAAGAAACTCAGCTTCAAGCTCTT 3155
|||| | || | || |||| ||||| || || |||||| ||| ||||||||| ||
Sbjct 116129 GCAGTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCTTCAAGCTGTT 116070
Query 3156 CAACATCCAAGTTAGAGGGGTCACGCAGAACGATGGCACGACGACTATTGCCAATAACCT 3215
||| |||| |||| | |||||| | | || || | ||||| || ||||||||||
Sbjct 116069 TAACGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAACCT 116010
Query 3216 TACCAGCACGGTTCAAGTGTTTACGGACTCGGAGTATCAGCTCCCGTACGTGCTCGGGTC 3275
|||||||| | || || ||| |||||||||| || ||| ||| | ||||||| ||
Sbjct 116009 CACCAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGGCAA 115950
Query 3276 GGCGCACCAAGGCTGTCTCCCGCCGTTTCCAGCGGACGTCTTCATGGTCCCTCAGTATGG 3335
|||||| | || || || || || || || | ||||||| |||||| ||||| |
Sbjct 115949 CGCGCACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTACGC 115890
Query 3336 ATACCTCACCCTGAACAACGGAAGTCAA-GCGGTGGGACGCTCATCCTTTTACTGCCTGG 3394
||| ||| || |||||||| | ||| || | | ||| ||| |||||||| |
Sbjct 115889 CTACGACACGCTCAACAACGG-GGACAACGCCGCAGCTCGCAGCAGCTTCTACTGCCTCG 115831
Query 3395 AGTACTTCCCTTCGCAGATGCTAAGGACTGGAAATAACTTCCAATTCAGCTATACCTTCG 3454
||||| | || |||||||| ||| || || |||| | | || || || |
Sbjct 115830 AGTACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACGTACGAGTTTG 115771
Query 3455 AGGATGTACCTTTTCAC 3471
|||| ||||| ||||||
Sbjct 115770 AGGACGTACCCTTTCAC 115754
Score = 181 bits (200), Expect = 3e-42
Identities = 368/538 (68%), Gaps = 24/538 (4%)
Strand=Plus/Minus
Query 2082 TATCAGAAACTGTGTCCAATTCATCATATCCTGGGAAGGGCACCCGAGATTGCC--TGTT 2139
||| | || ||||| || |||||||||| |||| ||| || ||| ||| ||||
Sbjct 117135 TATAAAAAGCTGTGCGCAGTTCATCATATTCTGGTCCGGGGGCCAGAGG--GCCAGTGTT 117078
Query 2140 CGGCCTGCGATTTGGCCAATGTGGAC----TTGG-----ATGACTGTGTTTCTGAGCAAT 2190
| ||||| || | ||||||| ||| ||| || |||| | || ||||
Sbjct 117077 CTGCCTGTAATCTCACCAATGTTGACAATGTTGATCTCAATAACTGCAATAAAGAACAAT 117018
Query 2191 AAATGACTTAAACCAGGTATGGCTGCTGACGGTTATCTTCCAGATTGGCTCGAGGACAAC 2250
| ||||| |||| || |||||||| || || || |||||| ||| | |||||||
Sbjct 117017 GATTGACTCAAAC-AGATATGGCTGATG---GTCATTTTCCAGGCTGGTTGGAGGACACT 116962
Query 2251 CTTTCTGAAGGCATTCGTGAGTGG--TGGGCTCTGAAACCTGGAGTCCCTCAACCCAAAG 2308
| ||||| || || ||||| | | | || |||||| || ||||
Sbjct 116961 TTCTCTGAGGGTCGGCGCCAGTGGAATAGATGC--AAGGCTGGAGCGCCCAAACCGCGGC 116904
Query 2309 CGAACCAACAACACCAGGACAACCGTCGGGGTCTTGTGCTTCCGGGTTACAAATACCTCG 2368
| |||| | ||||| ||| ||||||||| || |||||||| || ||||| ||||
Sbjct 116903 CTCACCAGCGTCACCAAGACTCTTCTCGGGGTCTGGTCCTTCCGGGATATAAATATCTCG 116844
Query 2369 GACCCGGTAACGGACTCGACAAAGGAGAGCCGGTCAACGAGGCGGACGCGGCAGCCCTCG 2428
|||| || || || || || ||||| | ||||| || ||||| | || || |
Sbjct 116843 GACCGTTCAATGGTCTGGATAAGGGAGACCGGGTCAGTCGCGCAGACGCCGTCGCTCTAG 116784
Query 2429 AACACGACAAAGCTTACGACCAGCAGCTCAAGGCCGGTGACAACCCGTACCTCAAGTACA 2488
| |||| | ||| || | |||||||| |||| || |||||||| |||||||||| ||
Sbjct 116783 AGCACGTCG--GCT-ACAGCGAGCAGCTCGAGGCGGGAGACAACCCCTACCTCAAGTGCA 116727
Query 2489 ACCACGCCGACGCCGAGTTTCAGGAGCGTCTTCAAGAAGATACGTCTTTTGGGGGCAACC 2548
|||| |||||| || || |||||| | || || || | ||||||| | ||||
Sbjct 116726 ACCATGCCGACAGAGAATTCCAGGAGAAGCACTCTGACGACACCTGTTTTGGGAGAAACC 116667
Query 2549 TTGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGATCCTTGAGCCTCTTGGTCTGGTTGA 2606
| || ||||||||||| |||||||||||| | | ||||||||| |||| || |||||
Sbjct 116666 TCGGAAGAGCAGTCTTTCAGGCCAAAAAGCGACTGCTTGAGCCTTTTGGCCTCGTTGA 116609
Score = 116 bits (128), Expect = 1e-22
Identities = 210/301 (70%), Gaps = 12/301 (4%)
Strand=Plus/Minus
Query 4018 GGCATGGTGTGGCAAGATCGTGACGTGTACCTTCAAGGACCTATCTGGGCAAAGATTCCT 4077
|||||||| ||||| | || | | | ||||| || || || |||||||| ||||||||
Sbjct 115252 GGCATGGTCTGGCAGAACCGCGGCATTTACCTGCAGGGCCCGATCTGGGCCAAGATTCCC 115193
Query 4078 CACACGGATGGACACTTTCATCCTTCTCCTCTGATGGGAGGCTTTGGACTGAAACATCCG 4137
||||| | || ||| || || || || || |||||||| || || | | | |
Sbjct 115192 CACACAGGCGGCAGCTTCCACCCGTCCCCGCTCATGGGAGGATTCGGGTTCAGGAAGCT- 115134
Query 4138 CCTCCTCAAATCATGATCAAAAATACTCCGGTACCGGCAAATCCTCC-GACGACTTTCAG 4196
|||||||| ||| | || ||||||| | ||| || || |||||||| | |||||||
Sbjct 115133 CCTCCTCAGATC-TCATAAAAAATATGCTGGTTCCCGCCAATCCTCCCGTCGACTTTGCC 115075
Query 4197 CCCGGCCAAGTTT----GCTTCATTTATCACTCAGTACTCCACTGGACAGGTCAGCGTGG 4252
||| || ||||| ||||||| || ||| || |||||||||||| | || |
Sbjct 115074 CCCAGC-AAGTTCCAGAGCTTCAT----CAACCAGGACAGCACTGGACAGGTGACAGTAG 115020
Query 4253 AAATTGAGTGGGAGCTACAGAAAGAAAACAGCAAACGTTGGAATCCAGAGATTCAGTACA 4312
| |||||||| |||| ||| || || || | ||||| || ||| | |||||||
Sbjct 115019 AGCTTGAGTGGCAGCTGCAGCGGGAGGACTCGAAGTGCTGGAACCCCGAGGTGCAGTACA 114960
Query 4313 C 4313
|
Sbjct 114959 C 114959
>seq615
Length=480679
Score = 401 bits (444), Expect = 2e-108
Identities = 589/836 (70%), Gaps = 42/836 (5%)
Strand=Plus/Plus
Query 987 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGATT 1046
||||||| ||||| || ||||| || | | | |||||||| | |||||||||
Sbjct 3651 TACATGGCACTGGTTAACTGCCTGGTAGAGAACAGCACTACGTCAGAGAGACAATGGATT 3710
Query 1047 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCCTCCA-------------ACTC 1093
|||||| |||||| || || |||| | ||| ||| | || | |
Sbjct 3711 CAGGAGAACCAGGAGTCCTATCTCTCTTACAATGCCACGGGCATTGCAAGAGAGATAGGC 3770
Query 1094 GCGGTCCCAGATCAAGGCCGCGCTGGACAATGCCTCCAAGATCATGAGCCTGACAAAGAC 1153
| |||| ||||||||| | || ||||| ||||| ||| |||
Sbjct 3771 GTGGTCGCAGATCAAGTCGGCTCTGGAAGATGCCAGCAAAATCT---------------- 3814
Query 1154 GGCTCCGGACTACCTGGTGGG--CAGCAACCCGCCGGAGGACATTACCAAAAATCGGATC 1211
|| ||||||| ||| | || | | | ||||| |||||||||||| || || | |
Sbjct 3815 -GCCGCGGACTATCTGTTCGGTTCTGTA--CCGCCTGAGGACATTACCGTGAACCGCAGC 3871
Query 1212 TACCAAATCCTGGAGCTGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGC 1271
|| |||| | || |||| || || || || | ||| |||| | | || |
Sbjct 3872 TAATGAATCTTCTAGATGAATGGCTATGACGCGGCCTGCGCCAGCTCCATTCTGCTCCGG 3931
Query 1272 TGGGCGCAAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACG 1331
||| ||||| |||||||| ||||||||| |||||||||||||||| || | || ||
Sbjct 3932 TGGTGCCAAAA-AAGTTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACC 3990
Query 1332 GGTAAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTAAAC 1391
|| || |||||||| ||||| || || ||||| |||||||||||||| |||||||| | |
Sbjct 3991 GGCAAGACCAACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGC 4050
Query 1392 TGGACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAG 1451
|||||||||||||| |||||||| ||||| ||| | ||||||||||||||| ||||||||
Sbjct 4051 TGGACCAATGAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAG 4109
Query 1452 GAGGGCAAGATGACGGCCAAGGTCGTGGAGAGCGCCAAGGCCATTCTGGGCGGAAGCAAG 1511
||| |||||||||||||||||||||||||| ||||||||||| | || || | |
Sbjct 4110 GAGTGCAAGATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACG 4169
Query 1512 GTGCGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGAACCCACTCCCGTGATCGTC 1571
|||| || |||| || |||||||| | | ||||| || ||||||| || ||| ||
Sbjct 4170 GTGCAAGTCAACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATC 4229
Query 1572 ACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCATCAG 1631
|||||| ||| |||| |||||| || || ||||||||| || || || || || |||
Sbjct 4230 ACCTCCTACATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAG 4289
Query 1632 CAGCCGCTGCAGGACCGGATGTTTGAATTTGAACTTACCCGCCGTTTGGACCATGACTTT 1691
|||||||||||||| ||||||| |||||||||| || ||| |||||| | | |||
Sbjct 4290 CAGCCGCTGCAGGATTGGATGTTCAAATTTGAACTAACGCGCTGTTTGGCGCCAGGTTTT 4349
Query 1692 GGGAAGGTCACCAAACAGGAAGTAAAGGACTTTTTCCGGTGGGCTTCCGATCACGTGACT 1751
||||| || || || || || || | ||| || ||||| | || ||| |
Sbjct 4350 GGGAAAGTGACTAAGTGAGAGGTCAAAGGCTTCTTTGCCTGGGCGCCGGAACACCCCAGG 4409
Query 1752 GACGTGGCTCATGAGTTCTACGTCAGAAAGGGTGGAGCTAA------GAAACGCCC 1801
|| ||| | || |||| |||||| | |||||| |||| |||||||||
Sbjct 4410 GAGGTGACGCACCAGTTTGACGTCACTAGGGGTGGGACTAACTGTGGGAAACGCCC 4465
Score = 259 bits (286), Expect = 1e-65
Identities = 491/715 (69%), Gaps = 37/715 (5%)
Strand=Plus/Plus
Query 2780 CACCAGCAGCCCCCACAAGTTTGGGATCTAATACAATG-------------GCTT----- 2821
|| ||||||||||| | ||||| ||||||||||||| | ||
Sbjct 5526 CAGCAGCAGCCCCCGTCAATTTGGAATCTAATACAATGATCTAGTTGTCAAGTTTGCCAC 5585
Query 2822 -CAGGCGGTGGCGCACCAATGGCAGACAATAACGAGGGTGCCGATGGAGTGGGTAATTCC 2880
|||| |||||| ||||| ||| |||| | | || |||| |||||||| | ||
Sbjct 5586 GCAGGAGGTGGCTCACCAGTGG---ACAACATGCGGTGTTCCGACGGAGTGGGCTCTGCC 5642
Query 2881 TCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTCATCACCACCAGCACC 2940
| | |||||||| | ||| || |||| |||| ||| | ||||| || | |||
Sbjct 5643 TGCAGTGATTGGCATGGAGATACCACATGGATGGGAGACCGTGTCATTACAAAGTCCACA 5702
Query 2941 AGAACCTGGGCCCTGCCCACTTACAACAACCATCTCTACAAGCAAATCTCCAGC-CAATC 2999
| || || ||||||||| ||||||||||| |||||| || ||| ||||| | | |
Sbjct 5703 CGGACAGGGATCCTGCCCACCTACAACAACCACATCTACAGGCGGATCACCAGCTCCACC 5762
Query 3000 AGGAGCTTCAAACGACAACCACTACTTTGGCTACAGCACCCCTTGGGGGTATTTTGACTT 3059
| | | ||| ||||||| ||||||||| || | || | |||||||||||
Sbjct 5763 GGCATCAGCAA-CGACAACACCTACTTTGGTTAGG------CGTGCTG-TATTTTGACTT 5814
Query 3060 TAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATTAACAACAACTG 3119
||| | |||||||||||||| | ||| || |||||| |||| ||| | || |||| |||
Sbjct 5815 CAACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGTCTCGTCAATAACAGCTG 5874
Query 3120 GGGATTCCGGCCCAAGAAACTCAGCTTCAAGCTCTTCAACATCCAAGTTAGAGGGGTCAC 3179
||| ||||||| ||| ||||| | |||||| | |||| ||| ||||| | | ||||||
Sbjct 5875 GGGTATCCGGCCTAAGCAACTCGGTTTCAAGTTATTCACCATACAAGTCAAGGAGGTCAC 5934
Query 3180 G-CAGAACGATGGCACGACGACTATTGCCAATAACCTTACCAGCACGGTTCAAGTGTTTA 3238
| ||| | | |||| | ||| || ||||||||||| |||||||| | || ||||||
Sbjct 5935 GACAG-TCAACAGCACAAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTG 5993
Query 3239 CGG--ACTCGGAGTATCAGCTCCCGTACGTGCTCGGGTCGGCGCACCAAGGCTGTCTCCC 3296
|| || |||| | ||||||||| | || || || ||| |||| || || ||
Sbjct 5994 TGGACACACGGACTGTCAGCTCCCACCCTTGACTGGCAATGCCCACGAAGGGTGCCTACC 6053
Query 3297 GCCGTTTCCAGCGGACGTCTTCATGGTCCCTCAGTATGGATACCTCACCCTGAACAACGG 3356
|| ||||| || ||||||| ||||| ||||| || |||| || || | ||||||||
Sbjct 6054 CCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACAGATAACTGACTTTCAACAACGG 6113
Query 3357 AAGTCAAGCGGTG-GGACGCTCATCCTTTTACTGCCTGGAGTACTTCCCTTCGCAGATGC 3415
| | ||| | | || ||| || || | |||| ||| || | ||||
Sbjct 6114 GCACAATGTCGTGCCCAGGAGCA-CCTACTATTGTCGGGAGCGCTTTCCCAGCAAAATGC 6172
Query 3416 TAAGGACTGGAAATAACTTCCAATTCAGCTATACCTTCGAGGATGTACCTTTTCA 3470
|||| || || || ||||| ||| ||||| ||| ||||| |||||||||||
Sbjct 6173 TAAGAACAGGCAACAACTTTGCCTTCGGCTATGACTTTGAGGAGGTACCTTTTCA 6227
Score = 154 bits (170), Expect = 4e-34
Identities = 299/442 (68%), Gaps = 31/442 (7%)
Strand=Plus/Plus
Query 2215 GCTGACGGTTATCTTCCAGATTGGCTCGAGGACAACCTTTCTGAAGGCATTCGTGAGTGG 2274
||||| |||||| || |||||||| | |||| | ||||||| ||||| || | || |||
Sbjct 4987 GCTGATGGTTATTTTACAGATTGGTTGGAGGGTACCCTTTCTAAAGGCTTTTGCGACTGG 5046
Query 2275 TGGGCTCTGAAACCTGGAGTCCCTCAACCCAAAGCGAACCAACAACACCAGGACAACCGT 2334
| ||| || |||| | | ||||| ||||||| ||| |
Sbjct 5047 T----------------AGTGCCCAAACCGAGGCCTAACCATTAACACCAAGACTCTGCT 5090
Query 2335 CGGGGTCTTGTGCTTCCGGGTTACAAATACCTCGGACCCGGTAACGGACTCGACAAAGGA 2394
|||||||| || |||||||| || ||||| ||||| ||| ||| | || || ||||||
Sbjct 5091 CGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGGA 5150
Query 2395 GAGCCGGTCAACGAGGCGGACGCGGCAGCCCTCGAACACGACA--AAGCTTACGACCAGC 2452
|| |||| ||| || ||||| |||| || || ||| || | || | |||
Sbjct 5151 GACGCGGTTAACAGAGCAGACGCCATTGCCCAAGAGCAGGACGTCAACC--ACCGCGAGC 5208
Query 2453 AGCTCAAGGCCGGTGACA----ACCCGTACCTCAAGTACAACCACGCCGACGCCGAGTTT 2508
|||| |||| || |||| | || |||||||||| |||| || | ||| ||||||
Sbjct 5209 AGCTGGAGGCGGGAGACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGTTT 5268
Query 2509 CAGGAGCGTCTTCAAGAAGATACGTCTTTTGGGGGCAACCTTGGCAGAGCAGTCTTCCAG 2568
|| || || || | || ||||||||| | ||||| || | ||||||||||||
Sbjct 5269 CAAAAGAAGCTCTCTGACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCCAG 5328
Query 2569 GCCAAAAAGA----GGATCCTTGAGCCTCTTGGTCTGGTTGAG---GAAGCAGCTAAAAC 2621
||||| |||| | | |||||||| || |||||| |||| || | |||| ||
Sbjct 5329 GCCAAGAAGAGTCTGTCTGTTTGAGCCTTTTAGTCTGGCTGAGTAAGAGGGCGCTACGAC 5388
Query 2622 GGCTCCTGGAAAGAAGGGGGCT 2643
|||||||| ||||| | |||
Sbjct 5389 AGCTCCTGGGGAGAAGCGCGCT 5410
Score = 150 bits (166), Expect = 5e-33
Identities = 245/346 (71%), Gaps = 9/346 (3%)
Strand=Plus/Plus
Query 3986 CTGGA-ACTGTCAATCATCAGGGGGCCTTACCTGGCATGGTGTGGCAAGATCGTGACGTG 4044
||||| | |||||| || |||| | ||||||||| ||||| | || ||| |
Sbjct 6719 CTGGAGAATGTCAACTCTCTCGGGGTGCTGCCTGGCATGAATTGGCAGAACCGAGACATC 6778
Query 4045 TACCTTCAAGGACCTATCTGGGCAAAGATTCCTCACACGGATGGACACTTTCATCCTTCT 4104
||||| || | | |||||||| ||| |||| ||||| || || |||||||||| |||
Sbjct 6779 TACCTCCAGAGCCTGATCTGGGCCAAGGTTCCACACACTGACGGGCACTTTCATCTGTCT 6838
Query 4105 CCTCTGATGGGAGGCTTTGGACTGAAACATCCGCCTCCTCAAATCATGATCAAAAATACT 4164
||||| ||||| || || || || || | | |||| ||| ||| || |||| || ||
Sbjct 6839 CCTCTCATGGGGGGATTCGGTCTCAAGAAGGCCCCTCTTCAGATCCTGGTCAAGAACACC 6898
Query 4165 CCGGTACCGGCAAATCCTCC-GACGACTTT-CAGCCCGGCCAAGTTTGCTTCA--TTTAT 4220
||||| || || ||||||| | || ||| || | | |||| | | || || ||
Sbjct 6899 CCGGTTCCTGCCGATCCTCCAGTGGAATTTACAAGC--GTCAAGCT--CAACAGCTTCAT 6954
Query 4221 CACTCAGTACTCCACTGGACAGGTCAGCGTGGAAATTGAGTGGGAGCTACAGAAAGAAAA 4280
||||||||| ||| |||| | | |||||||||| | | |||||| ||| || |
Sbjct 6955 CACTCAGTATAGCACCAGACAAGAAACCGTGGAAATTAAATAGGAGCTGCAGCTGGAGGA 7014
Query 4281 CAGCAAACGTTGGAATCCAGAGATTCAGTACACTTCCAACTACAAC 4326
| ||| | ||||| ||||| ||||| ||||||||||||| ||||
Sbjct 7015 CTCCAAGAGGTGGAACCCAGAAATTCAATACACTTCCAACTTCAAC 7060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15000784267785
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