Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq875 524 2e-145 seq615 428 1e-116 >seq875 Length=186252 Score = 524 bits (580), Expect = 2e-145 Identities = 603/800 (75%), Gaps = 15/800 (2%) Strand=Plus/Minus Query 1040 GTACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGAT 1099 |||||||||||| || ||||||||||| ||| || |||||||| | ||||||||| Sbjct 118268 GTACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGAT 118210 Query 1100 CCAGGAGGACCAGGCGTCCTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCACAAAT 1159 |||||| |||||| ||| ||||| | |||||| | ||| | || || ||||| Sbjct 118209 TCAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAAT 118150 Query 1160 CAAGGCCGCGCTGGACAATGCCTCCAAAATCATGAGCCTGACAAAGACGGCTCCGGACTA 1219 |||| | || |||||||| ||| ||||||| |||||||||| |||||||| ||||||| Sbjct 118149 CAAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTA 118090 Query 1220 CCTGGT-GGGCCAGAACCCGCCGGAGGACATTTCCAG--CAACCGCATCTACCGAATCCT 1276 |||||| ||| | | | | ||| ||| | || || ||||||| || |||| ||| | Sbjct 118089 CCTGGTCGGGTCTGCATC-GCCAGAGCA----TCGAGGACAACCGCGTCCACCGCATCTT 118035 Query 1277 CGAGATGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCTGGGCGCAAAA 1336 | | ||||| ||||| ||| || || | ||| || | ||||||||| | || Sbjct 118034 TCACCTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGCCGAAG 117975 Query 1337 GAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAA 1396 ||||| || ||| |||||||| |||||||||||| || || | ||||| || ||||| Sbjct 117974 AAAGTTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCAA 117915 Query 1397 CATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGA 1456 ||| |||| || || ||||| || |||||||| || || | || |||||||||| || Sbjct 117914 CATTGCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCGA 117855 Query 1457 GAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1516 |||||||| |||| ||||| || ||||||| ||||| | |||||||||||||||||| Sbjct 117854 GAACTTTCTCTTCAT-GATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGAT 117796 Query 1517 GACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGGTGCGCGTGGA 1576 ||||||||||||| | ||| ||||||||||||||||| | | || || | ||||| Sbjct 117795 GACGGCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCAG-TGTGAGTGGA 117737 Query 1577 CCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCACCTCCAACAC 1636 ||| || |||||| | ||| |||| || || || || || ||| ||||||||||||| Sbjct 117736 CCAGAAATGCAAGCC-TCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACAC 117678 Query 1637 CAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAGCACCAACAACCACTCCA 1696 ||||||||||| ||||| ||||||||||||| ||||| || |||||||| || | || Sbjct 117677 CAACATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTACA 117618 Query 1697 GGACCGGATGTTCAAGTTCGAGCTCACCAAGCGCCTGGAGCACGACTTTGGCAAGGTCAC 1756 |||||| ||||||||||| || || || | || |||||| |||||||| || || || Sbjct 117617 GGACCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGAC 117558 Query 1757 CAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCGTCAGATCACGTGACCGAGGTGACTCA 1816 |||| ||| ||||||||||||||| ||||| | | ||| | | ||| |||| Sbjct 117557 TAAGCGGGAGGTCAAAGACTTTTTCGCCTGGGCCACCGCCAACGAG-CATCGGT--CTCA 117501 Query 1817 CGAGTTTTACGTCAGAAAGG 1836 |||||||| || || |||| Sbjct 117500 CGAGTTTTTTGTGAGGAAGG 117481 Score = 253 bits (280), Expect = 6e-64 Identities = 478/688 (69%), Gaps = 29/688 (4%) Strand=Plus/Minus Query 2890 GGTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTCTGAG 2949 |||| ||||| |||||| | ||||||| |||||| |||| |||||| ||| | Sbjct 116363 GGTGACGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGGC 116304 Query 2950 GGCCACGTCACGACCACC-AG--CACCAGAACCTGGGTCTTGCCCACCTACAACAACCAC 3006 |||||| | |||| || | || | ||||||||| ||||||| |||||| ||||| Sbjct 116303 AACCACGT---GCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCAC-TACAACCACCAC 116248 Query 3007 CTCTACAAGCG-----ACTCGGAGAGAGCCTGCAGTCCA--ACACCTACAACGGATTCTC 3059 | |||||||| |||| || ||||| ||| | | ||| | | || | | ||| Sbjct 116247 CAGTACAAGCGCATCGACTCAAAGGGAGCCACCAG-CAAGGACAATTTCTACAGCTACTC 116189 Query 3060 CACCCCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACGTGACTG 3119 || || ||||||||||||||||| ||| ||||||| | | |||| ||||| || ||||| Sbjct 116188 TACTCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGACTG 116130 Query 3120 GCAGCGACTCATCAACAACAACTGGGGCATGCGACCCAA-AGCCATGCGGGTCAAAATCT 3178 |||| | || |||| |||| ||||| | | |||| || | | | |||| | | Sbjct 116129 GCAGTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCT-TCAAGCTGT 116071 Query 3179 TCAACATCCAGGTCAAGGAGGTCACGACGTCGAACGGCGAGACAACGGTGGCTAATAACC 3238 | ||| ||||||| ||||||||||| ||| | | || | || || | | ||||||| Sbjct 116070 TTAACGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAACC 116011 Query 3239 TTACCAGCACGGTTCAGATCTTTGCGGACTCGTCGTACGAACTGCCGTACGTGAT-GGAT 3297 | |||||||| | ||| |||||||||||||| ||| | | | | ||||| | || Sbjct 116010 TCACCAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGGCA 115951 Query 3298 GCGGGTCAAGAGGGCAGCCTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTAC 3357 || | || ||||| | |||||||| || || | | ||||| | ||| ||||||||| Sbjct 115950 ACGCG-CACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTAC 115892 Query 3358 GGCTACTGTGGACTGGTGACCGGCAACACTTCGCAGCAACAGACTGACAGAAATGCCTTC 3417 | |||| || | ||| ||| ||| ||| || ||| | |||| Sbjct 115891 GCCTACGACACGCTCAACAACGGGGACA--ACGCCGCA----GCTCGCAGCA---GCTTC 115841 Query 3418 TACTGCCTGGAGTACTTTCCTTCGCAGATGCTGCGGACTGGCAACAACTTTGAAATTACG 3477 |||||||| |||||| | || ||||||||||||| |||||||||| | ||| Sbjct 115840 TACTGCCTCGAGTACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACG 115781 Query 3478 TACAGTTTTGAGAAGGTGCCTTTCCACTCGATGTACGCGCACAGCCAGAGCCTGGACCGG 3537 ||| |||||| | || || || |||||||||||| |||| ||||||| || ||| Sbjct 115780 TACGAGTTTGAGGACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCAC 115721 Query 3538 CTGATGAACCCTCTCATCGACCAGTACC 3565 ||| | ||||| |||| |||| ||||| Sbjct 115720 CTGGTTAACCCGTTCATGGACCGGTACC 115693 Score = 232 bits (256), Expect = 2e-57 Identities = 378/535 (71%), Gaps = 21/535 (4%) Strand=Plus/Minus Query 2133 TATCAGAAACTGTGTCCGATTCATCACATCATGGGGAGGGCGCCCGAGGTGGCC--TGCT 2190 ||| | || ||||| | ||||||| || ||| ||| ||| |||| ||| || | Sbjct 117135 TATAAAAAGCTGTGCGCAGTTCATCATATTCTGGTCCGGGGGCCAGAGG--GCCAGTGTT 117078 Query 2191 CGGCCTGCGAACTGGCCAATGTGGAC----TTGG-----ATGACTGTGACATGGAACAAT 2241 | ||||| | || ||||||| ||| ||| || |||| | | ||||||| Sbjct 117077 CTGCCTGTAATCTCACCAATGTTGACAATGTTGATCTCAATAACTGCAATAAAGAACAAT 117018 Query 2242 AAATGACTCAAACCAGATATGACTGACGGTTACCTTCCAGATTGGCTAGAGGACAACCTC 2301 | |||||||||| ||||||| |||| ||| | |||||| ||| | ||||||| || Sbjct 117017 GATTGACTCAAAC-AGATATGGCTGATGGTCATTTTCCAGGCTGGTTGGAGGACACTTTC 116959 Query 2302 TCTGAAGGCGTTCGAGAGTGGTGGGCGCTGCAAC-CTGGAGCCCCTAAACCCAAGGCAAA 2360 ||||| || || ||||| | ||||| ||||||| || ||||| | | | Sbjct 116958 TCTGAGGGTCGGCGCCAGTGGAATA-GATGCAAGGCTGGAGCGCCCAAACCGCGGCCTCA 116900 Query 2361 TCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTCCGGGTTACAAATACCTCGGACC 2420 || | || || ||| |||||||||| || |||||||| || ||||| |||||||| Sbjct 116899 CCAGCGTCACCAAGACTCTTCTCGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGACC 116840 Query 2421 CGGCAACGGACTCGACAAGGGGGAACCCGTCAA-CGCAGCGGACGCGGCAGCCCTCGAGC 2479 ||| || || || ||||| || | |||| ||| || ||||| | || || |||| Sbjct 116839 GTTCAATGGTCTGGATAAGGGAGACCGGGTCAGTCGC-GCAGACGCCGTCGCTCTAGAGC 116781 Query 2480 ACGACAAGGCCTACGACCAGCAGCTCAAGGCCGGTGACAACCCCTACCTCAAGTACAACC 2539 ||| | | |||| | |||||||| |||| || ||||||||||||||||||| ||||| Sbjct 116780 ACGTC---GGCTACAGCGAGCAGCTCGAGGCGGGAGACAACCCCTACCTCAAGTGCAACC 116724 Query 2540 ACGCCGACGCGGAGTTCCAGCAGCGGCTTCAGGGCGACACATCGTTTGGGGGCAACCTCG 2599 | |||||| || |||||| || || | |||||| | |||||| | ||||||| Sbjct 116723 ATGCCGACAGAGAATTCCAGGAGAAGCACTCTGACGACACCTGTTTTGGGAGAAACCTCG 116664 Query 2600 GCAGAGCAGTCTTCCAGGCCAAAAAGAGGGTTCTTGAACCTCTTGGTCTGGTTGA 2654 | ||||||||||| |||||||||||| | | ||||| ||| |||| || ||||| Sbjct 116663 GAAGAGCAGTCTTTCAGGCCAAAAAGCGACTGCTTGAGCCTTTTGGCCTCGTTGA 116609 >seq615 Length=480679 Score = 428 bits (474), Expect = 1e-116 Identities = 585/817 (72%), Gaps = 40/817 (5%) Strand=Plus/Plus Query 1041 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGATC 1100 ||||||| ||||| || ||||| || | | | |||||||| | |||||||| Sbjct 3651 TACATGGCACTGGTTAACTGCCTGGTAGAGAACAGCACTACGTCAGAGAGACAATGGATT 3710 Query 1101 CAGGAGGACCAGGCGTCCTACATCTCCTTCAACGCCGCCTCCA-------------ACTC 1147 |||||| |||||| |||||| |||| | ||| ||| | || | | Sbjct 3711 CAGGAGAACCAGGAGTCCTATCTCTCTTACAATGCCACGGGCATTGCAAGAGAGATAGGC 3770 Query 1148 GCGGTCACAAATCAAGGCCGCGCTGGACAATGCCTCCAAAATCATGAGCCTGACAAAGAC 1207 | |||| || |||||| | || ||||| ||||| ||||||| Sbjct 3771 GTGGTCGCAGATCAAGTCGGCTCTGGAAGATGCCAGCAAAATCT---------------- 3814 Query 1208 GGCTCCGGACTACCTGGTGGGC-CAGAACCCGCCGGAGGACATTTCCAGCAACCGCATCT 1266 || ||||||| ||| | || | | ||| ||| ||||||||| || ||||||| || Sbjct 3815 -GCCGCGGACTATCTGTTCGGTTCTGTACC-GCCTGAGGACATTACCGTGAACCGCAGCT 3872 Query 1267 ACCGAATCCTCGAGATGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCT 1326 | ||||| || ||||||| || || || || | ||| |||| | | || | | Sbjct 3873 AATGAATCTTCTAGATGAATGGCTATGACGCGGCCTGCGCCAGCTCCATTCTGCTCCGGT 3932 Query 1327 GGGCGCAAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGG 1386 || ||||| |||||||| ||||||||| |||||||||||||||| || | || || | Sbjct 3933 GGTGCCAAAA-AAGTTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCG 3991 Query 1387 GTAAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACT 1446 | || |||||||| ||||| || || ||||| |||||||||||||| |||||||| | || Sbjct 3992 GCAAGACCAACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCT 4051 Query 1447 GGACCAATGAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGG 1506 ||||||||||||| ||||| || ||||| ||| | ||||||||||||||| ||||||||| Sbjct 4052 GGACCAATGAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGG 4110 Query 1507 AGGGCAAGATGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGG 1566 || |||||||||||||||||||||| ||| ||||||||||||| || || | || Sbjct 4111 AGTGCAAGATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGG 4170 Query 1567 TGCGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCA 1626 ||| || |||| || |||||||| | | ||||| ||||| |||| || ||| ||| Sbjct 4171 TGCAAGTCAACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCA 4230 Query 1627 CCTCCAACACCAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAGCACCAAC 1686 ||||| ||| |||| |||||| |||||||||||| ||||| | || || || ||||| | Sbjct 4231 CCTCCTACATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGC 4290 Query 1687 AACCACTCCAGGACCGGATGTTCAAGTTCGAGCTCACCAAGCGC---CTGGAGCACGACT 1743 | || || ||||| |||||||||| || || || || |||| ||| || | | Sbjct 4291 AGCCGCTGCAGGATTGGATGTTCAAATTTGAACTAAC---GCGCTGTTTGGCGCCAGGTT 4347 Query 1744 TTGGCAAGGTCACCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCGTCAGATCACGTGA 1803 |||| || || || ||| || ||||||| ||| || |||||| | || ||| | Sbjct 4348 TTGGGAAAGTGACTAAGTGAGAGGTCAAAGGCTTCTTTGCCTGGGCGCCGGAACACCCCA 4407 Query 1804 CCGAGGTGACTCACGAGTTTTACGTCAGAAAGGGTGG 1840 |||||||| ||| ||||| |||||| | |||||| Sbjct 4408 GGGAGGTGACGCACCAGTTTGACGTCACTAGGGGTGG 4444 Score = 187 bits (206), Expect = 8e-44 Identities = 468/693 (68%), Gaps = 31/693 (4%) Strand=Plus/Plus Query 2891 GTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTCTGAGG 2950 || |||| |||||||| ||||| ||||||||||| | ||| |||| ||| | | Sbjct 5620 GTTCCGACGGAGTGGGCTCTGCCTGCAGTGATTGGCATGGAGATACCACATGGATGGGAG 5679 Query 2951 GCCACGTCACGACCACCAGCACCAGAACCTGGGTCTTGCCCACCTACAACAACCACCTCT 3010 || |||| || | ||| | || || || |||||||||||||||||||| ||| Sbjct 5680 ACCGTGTCATTACAAAGTCCACACGGACAGGGATCCTGCCCACCTACAACAACCACATCT 5739 Query 3011 ACAAGCGACTCGGAGAGAGCCTGCAGTC-CAACACCTACAACGGATTCTCCACCC---CC 3066 ||| ||| || || || | | || || | ||||| | || | Sbjct 5740 ACAGGCGGATCACC-AGCTCCACCGGCATCAGCAACGACAACACCTACTTTGGTTAGGCG 5798 Query 3067 TGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACGTGACTGGCAGCGA 3126 || | || ||||||||||||||||||||||||||||| | ||| || |||||| |||| Sbjct 5799 TGCTG-TATTTTGACTTCAACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGT 5857 Query 3127 CTCATCAACAACAACTGGGGCATGCGACCCAAAGCCATGCGG-GTCAAAATCTTCAACAT 3185 ||| |||| |||| |||||| || || || |||| | ||| |||| | |||| ||| Sbjct 5858 CTCGTCAATAACAGCTGGGGTATCCG-GCCTAAGCAACTCGGTTTCAAGTTATTCACCAT 5916 Query 3186 CCAGGTCAAGGAGGTCACGAC-GTCGAACGGCGAGACAACGGTGGCTAATAACCTTACCA 3244 || ||||||||||||||||| ||| ||| || | || | || |||||||| |||| Sbjct 5917 ACAAGTCAAGGAGGTCACGACAGTC-AACAGCACAAAGACCATCGCCAATAACCTCACCA 5975 Query 3245 GCACGGTTCAGATCTTTGCGGACTCGTCGTAC---GAACTGCCGTACGTGA-TGG--ATG 3298 |||| | ||| | |||| |||| | || || | || || | ||| ||| ||| Sbjct 5976 GCACCATCCAGGTGTTTGTGGACAC-ACGGACTGTCAGCTCCCACCCTTGACTGGCAATG 6034 Query 3299 CGGGTCAAGAGGGCAGCCTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTACG 3358 | || || || |||| || ||||||||| | |||||||||||||||| || ||| Sbjct 6035 C---CCACGAAGGGTGCCTACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACA 6091 Query 3359 GCTACTGTGGACTGGTGACCGGCAACACTTCGCAGCAACAGACTG-ACAGAAATGCCTTC 3417 | || || |||| ||||| ||| ||| || ||| | ||| | Sbjct 6092 GATA------AC---TGACTTTCAACAACGGGCA-CAATGTCGTGCCCAGGAGCACCTAC 6141 Query 3418 TACTGCCTGGAGTACTTTCCTTCGCAGATGCTGCGGACTGGCAACAACTTTGAAATTACG 3477 || || | |||| |||||| | ||||| | || ||||||||||||| | Sbjct 6142 TATTGTCGGGAGCGCTTTCCCAGCAAAATGCTAAGAACAGGCAACAACTTTGCCTTCGGC 6201 Query 3478 TACAGTTTTGAGAAGGTGCCTTTCCACTCGATGTACGCGCACAGCCAGAGCCTGGACCGG 3537 || |||||| |||| ||||| || || |||||| |||||||| || |||||| Sbjct 6202 TATGACTTTGAGGAGGTACCTTTTCAGTCAATGTACATACACAGCCATGGCACTGACCGG 6261 Query 3538 CTGATGAACCCTCTCATCGACCAGTACCTGTGG 3570 ||||||||| | || | || ||||| ||||| Sbjct 6262 CTGATGAACTCGCTGTTGAACTAGTACTTGTGG 6294 Score = 165 bits (182), Expect = 2e-37 Identities = 327/481 (68%), Gaps = 40/481 (8%) Strand=Plus/Plus Query 2220 GATGACTGTGACATGGAACAATAAATGACTCAAAC-CAGATATGACTGACGGTTACCTTC 2278 |||||||| | | ||||||| | |||||| || ||| |||| ||||| || Sbjct 4949 GATGACTGCAATAAAGAACAATGATGGACTCAGACACAG------CTGATGGTTATTTTA 5002 Query 2279 CAGATTGGCTAGAGGACAACCTCTCTGAAGGCGTTCGAGAGTGGTGGGCGCTGCAACCTG 2338 |||||||| | |||| | ||| ||| ||||| || | || |||| | Sbjct 5003 CAGATTGGTTGGAGGGTACCCTTTCTAAAGGCTTTTGCGACTGGTAGT------------ 5050 Query 2339 GAGCCCCTAAACCCAAGGCAAATCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTC 2398 |||| ||||| | | | || || |||| || ||| ||||||||||| || |||| Sbjct 5051 --GCCC--AAACCGAGGCCTAACCATTAACACCAAGACTCTGCTCGGGGTCTGGTCCTTC 5106 Query 2399 CGGGTTACAAATACCTCGGACCCGGCAACGGACTCGACAAGGGGGAACCCGTCAACGCAG 2458 |||| || ||||| ||||| ||| |||| | || || || || || | || ||| || Sbjct 5107 CGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGGAGACGCGGTTAACAGAG 5166 Query 2459 CGGACGCGGCAGCCCTCGAGCACGACAAGGCCTACGACC---AGCAGCTCAAGGCCGGTG 2515 | ||||| |||| ||||| ||| | | || ||| ||||||| |||| || | Sbjct 5167 CAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGAGCAGCTGGAGGCGGGAG 5223 Query 2516 ACA----ACCCCTACCTCAAGTACAACCACGCCGACGCGGAGTTCCAGCAGCGGCTTCAG 2571 ||| | || |||||||||| |||| || | ||| ||||| || || ||| Sbjct 5224 ACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGTTTCAAAAGAAGCTCTCT 5283 Query 2572 GGCGACACATCGTTTGGGGGCAACCTCGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGGT- 2630 | | |||| || |||||| | |||||||| | ||||||||||||||||| ||||| | Sbjct 5284 GACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCCAGGCCAAGAAGAGTCTG 5343 Query 2631 TC---TTGAACCTCTTGGTCTGGTTGAGCAAGCGGG---TGAGACGGCTCCTGGAAAGAA 2684 || |||| ||| || |||||| |||| ||| ||| | ||| |||||||| |||| Sbjct 5344 TCTGTTTGAGCCTTTTAGTCTGGCTGAGTAAGAGGGCGCTACGACAGCTCCTGGGGAGAA 5403 Query 2685 G 2685 | Sbjct 5404 G 5404 Score = 114 bits (126), Expect = 4e-22 Identities = 277/414 (67%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 4058 TGCCTGGAATGGTCTGGCAAAACAGAGACATTTACTACCAGGGTCCCATTTGGGCCAAGA 4117 ||||||| ||| ||||| ||| ||||||| ||| |||| | | || ||||||||| Sbjct 6747 TGCCTGGCATGAATTGGCAGAACCGAGACATCTACCTCCAGAGCCTGATCTGGGCCAAGG 6806 Query 4118 TTCCTCATACCGATGGACACTTTCACCCCTCACCGCTGATTGGTGGGTTTGGGCTGAAAC 4177 |||| || || || || |||||||| | || || || || || || || || || || Sbjct 6807 TTCCACACACTGACGGGCACTTTCATCTGTCTCCTCTCATGGGGGGATTCGGTCTCAAGA 6866 Query 4178 ACCCGCCTCCTCAAATTTTTATCAAGAACACCCCGGTACCTGCGAATCCTGCAACGACCT 4237 | | |||| ||| || | |||||||||||||||| ||||| ||||| || | | Sbjct 6867 AGGCCCCTCTTCAGATCCTGGTCAAGAACACCCCGGTTCCTGCCGATCCTCCAGTGGAAT 6926 Query 4238 T---CAGC-TCTACTCCGGTAAACTCCTTCATTACTCAGTACAGCACTGGCCAGGTGTCG 4293 | ||| || | | | ||| |||||| |||||||| ||||| | || | | Sbjct 6927 TTACAAGCGTCAA----GCTCAACAGCTTCATCACTCAGTATAGCACCAGACAAGAAACC 6982 Query 4294 GTGCAGATTGACTGGGAGATCCAGAAGGAGCGGTCCAAACGCTGGAACCCCGAGGTCCAG 4353 ||| | ||| | | |||| | ||| |||| ||||| | |||||||| || | || Sbjct 6983 GTGGAAATTAAATAGGAGCTGCAGCTGGAGGACTCCAAGAGGTGGAACCCAGAAATTCAA 7042 Query 4354 TTTACCTCCAACT---ACGGACAGCAAAACTCTCTGTTGTGGGCTCCCGATGCGGCTGGG 4410 | || ||||||| ||| ||| | || || | | || ||||| |||| Sbjct 7043 TACACTTCCAACTTCAACGTGCAGGCAGAC-ATCGACTTT--GCCCCCGACAACTCTGGT 7099 Query 4411 AAATACACTGAGCCTAGGGCTATCGGTACCCGCTACCTCACCCACCACCTGTAA 4464 ||| | |||| |||| |||||| ||||||| | |||||| |||| ||| Sbjct 7100 GTCTACTCAGAGCTGAGGGTTATCGGAACCCGCTGGGTTACCCACAACCTCTAA 7153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15131893232820