Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_001829.1
Length=4767
Score E
Sequences producing significant alignments: (Bits) Value
seq875 524 2e-145
seq615 428 1e-116
>seq875
Length=186252
Score = 524 bits (580), Expect = 2e-145
Identities = 603/800 (75%), Gaps = 15/800 (2%)
Strand=Plus/Minus
Query 1040 GTACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGAT 1099
|||||||||||| || ||||||||||| ||| || |||||||| | |||||||||
Sbjct 118268 GTACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGAT 118210
Query 1100 CCAGGAGGACCAGGCGTCCTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCACAAAT 1159
|||||| |||||| ||| ||||| | |||||| | ||| | || || |||||
Sbjct 118209 TCAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAAT 118150
Query 1160 CAAGGCCGCGCTGGACAATGCCTCCAAAATCATGAGCCTGACAAAGACGGCTCCGGACTA 1219
|||| | || |||||||| ||| ||||||| |||||||||| |||||||| |||||||
Sbjct 118149 CAAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTA 118090
Query 1220 CCTGGT-GGGCCAGAACCCGCCGGAGGACATTTCCAG--CAACCGCATCTACCGAATCCT 1276
|||||| ||| | | | | ||| ||| | || || ||||||| || |||| ||| |
Sbjct 118089 CCTGGTCGGGTCTGCATC-GCCAGAGCA----TCGAGGACAACCGCGTCCACCGCATCTT 118035
Query 1277 CGAGATGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCTGGGCGCAAAA 1336
| | ||||| ||||| ||| || || | ||| || | ||||||||| | ||
Sbjct 118034 TCACCTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGCCGAAG 117975
Query 1337 GAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAA 1396
||||| || ||| |||||||| |||||||||||| || || | ||||| || |||||
Sbjct 117974 AAAGTTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCAA 117915
Query 1397 CATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGA 1456
||| |||| || || ||||| || |||||||| || || | || |||||||||| ||
Sbjct 117914 CATTGCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCGA 117855
Query 1457 GAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGAT 1516
|||||||| |||| ||||| || ||||||| ||||| | ||||||||||||||||||
Sbjct 117854 GAACTTTCTCTTCAT-GATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGAT 117796
Query 1517 GACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGGTGCGCGTGGA 1576
||||||||||||| | ||| ||||||||||||||||| | | || || | |||||
Sbjct 117795 GACGGCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCAG-TGTGAGTGGA 117737
Query 1577 CCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCACCTCCAACAC 1636
||| || |||||| | ||| |||| || || || || || ||| |||||||||||||
Sbjct 117736 CCAGAAATGCAAGCC-TCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACAC 117678
Query 1637 CAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAGCACCAACAACCACTCCA 1696
||||||||||| ||||| ||||||||||||| ||||| || |||||||| || | ||
Sbjct 117677 CAACATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTACA 117618
Query 1697 GGACCGGATGTTCAAGTTCGAGCTCACCAAGCGCCTGGAGCACGACTTTGGCAAGGTCAC 1756
|||||| ||||||||||| || || || | || |||||| |||||||| || || ||
Sbjct 117617 GGACCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGAC 117558
Query 1757 CAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCGTCAGATCACGTGACCGAGGTGACTCA 1816
|||| ||| ||||||||||||||| ||||| | | ||| | | ||| ||||
Sbjct 117557 TAAGCGGGAGGTCAAAGACTTTTTCGCCTGGGCCACCGCCAACGAG-CATCGGT--CTCA 117501
Query 1817 CGAGTTTTACGTCAGAAAGG 1836
|||||||| || || ||||
Sbjct 117500 CGAGTTTTTTGTGAGGAAGG 117481
Score = 253 bits (280), Expect = 6e-64
Identities = 478/688 (69%), Gaps = 29/688 (4%)
Strand=Plus/Minus
Query 2890 GGTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTCTGAG 2949
|||| ||||| |||||| | ||||||| |||||| |||| |||||| ||| |
Sbjct 116363 GGTGACGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGGC 116304
Query 2950 GGCCACGTCACGACCACC-AG--CACCAGAACCTGGGTCTTGCCCACCTACAACAACCAC 3006
|||||| | |||| || | || | ||||||||| ||||||| |||||| |||||
Sbjct 116303 AACCACGT---GCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCAC-TACAACCACCAC 116248
Query 3007 CTCTACAAGCG-----ACTCGGAGAGAGCCTGCAGTCCA--ACACCTACAACGGATTCTC 3059
| |||||||| |||| || ||||| ||| | | ||| | | || | | |||
Sbjct 116247 CAGTACAAGCGCATCGACTCAAAGGGAGCCACCAG-CAAGGACAATTTCTACAGCTACTC 116189
Query 3060 CACCCCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACGTGACTG 3119
|| || ||||||||||||||||| ||| ||||||| | | |||| ||||| || |||||
Sbjct 116188 TACTCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGACTG 116130
Query 3120 GCAGCGACTCATCAACAACAACTGGGGCATGCGACCCAA-AGCCATGCGGGTCAAAATCT 3178
|||| | || |||| |||| ||||| | | |||| || | | | |||| | |
Sbjct 116129 GCAGTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCT-TCAAGCTGT 116071
Query 3179 TCAACATCCAGGTCAAGGAGGTCACGACGTCGAACGGCGAGACAACGGTGGCTAATAACC 3238
| ||| ||||||| ||||||||||| ||| | | || | || || | | |||||||
Sbjct 116070 TTAACGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAACC 116011
Query 3239 TTACCAGCACGGTTCAGATCTTTGCGGACTCGTCGTACGAACTGCCGTACGTGAT-GGAT 3297
| |||||||| | ||| |||||||||||||| ||| | | | | ||||| | ||
Sbjct 116010 TCACCAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGGCA 115951
Query 3298 GCGGGTCAAGAGGGCAGCCTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTAC 3357
|| | || ||||| | |||||||| || || | | ||||| | ||| |||||||||
Sbjct 115950 ACGCG-CACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTAC 115892
Query 3358 GGCTACTGTGGACTGGTGACCGGCAACACTTCGCAGCAACAGACTGACAGAAATGCCTTC 3417
| |||| || | ||| ||| ||| ||| || ||| | ||||
Sbjct 115891 GCCTACGACACGCTCAACAACGGGGACA--ACGCCGCA----GCTCGCAGCA---GCTTC 115841
Query 3418 TACTGCCTGGAGTACTTTCCTTCGCAGATGCTGCGGACTGGCAACAACTTTGAAATTACG 3477
|||||||| |||||| | || ||||||||||||| |||||||||| | |||
Sbjct 115840 TACTGCCTCGAGTACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACG 115781
Query 3478 TACAGTTTTGAGAAGGTGCCTTTCCACTCGATGTACGCGCACAGCCAGAGCCTGGACCGG 3537
||| |||||| | || || || |||||||||||| |||| ||||||| || |||
Sbjct 115780 TACGAGTTTGAGGACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCAC 115721
Query 3538 CTGATGAACCCTCTCATCGACCAGTACC 3565
||| | ||||| |||| |||| |||||
Sbjct 115720 CTGGTTAACCCGTTCATGGACCGGTACC 115693
Score = 232 bits (256), Expect = 2e-57
Identities = 378/535 (71%), Gaps = 21/535 (4%)
Strand=Plus/Minus
Query 2133 TATCAGAAACTGTGTCCGATTCATCACATCATGGGGAGGGCGCCCGAGGTGGCC--TGCT 2190
||| | || ||||| | ||||||| || ||| ||| ||| |||| ||| || |
Sbjct 117135 TATAAAAAGCTGTGCGCAGTTCATCATATTCTGGTCCGGGGGCCAGAGG--GCCAGTGTT 117078
Query 2191 CGGCCTGCGAACTGGCCAATGTGGAC----TTGG-----ATGACTGTGACATGGAACAAT 2241
| ||||| | || ||||||| ||| ||| || |||| | | |||||||
Sbjct 117077 CTGCCTGTAATCTCACCAATGTTGACAATGTTGATCTCAATAACTGCAATAAAGAACAAT 117018
Query 2242 AAATGACTCAAACCAGATATGACTGACGGTTACCTTCCAGATTGGCTAGAGGACAACCTC 2301
| |||||||||| ||||||| |||| ||| | |||||| ||| | ||||||| ||
Sbjct 117017 GATTGACTCAAAC-AGATATGGCTGATGGTCATTTTCCAGGCTGGTTGGAGGACACTTTC 116959
Query 2302 TCTGAAGGCGTTCGAGAGTGGTGGGCGCTGCAAC-CTGGAGCCCCTAAACCCAAGGCAAA 2360
||||| || || ||||| | ||||| ||||||| || ||||| | | |
Sbjct 116958 TCTGAGGGTCGGCGCCAGTGGAATA-GATGCAAGGCTGGAGCGCCCAAACCGCGGCCTCA 116900
Query 2361 TCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTCCGGGTTACAAATACCTCGGACC 2420
|| | || || ||| |||||||||| || |||||||| || ||||| ||||||||
Sbjct 116899 CCAGCGTCACCAAGACTCTTCTCGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGACC 116840
Query 2421 CGGCAACGGACTCGACAAGGGGGAACCCGTCAA-CGCAGCGGACGCGGCAGCCCTCGAGC 2479
||| || || || ||||| || | |||| ||| || ||||| | || || ||||
Sbjct 116839 GTTCAATGGTCTGGATAAGGGAGACCGGGTCAGTCGC-GCAGACGCCGTCGCTCTAGAGC 116781
Query 2480 ACGACAAGGCCTACGACCAGCAGCTCAAGGCCGGTGACAACCCCTACCTCAAGTACAACC 2539
||| | | |||| | |||||||| |||| || ||||||||||||||||||| |||||
Sbjct 116780 ACGTC---GGCTACAGCGAGCAGCTCGAGGCGGGAGACAACCCCTACCTCAAGTGCAACC 116724
Query 2540 ACGCCGACGCGGAGTTCCAGCAGCGGCTTCAGGGCGACACATCGTTTGGGGGCAACCTCG 2599
| |||||| || |||||| || || | |||||| | |||||| | |||||||
Sbjct 116723 ATGCCGACAGAGAATTCCAGGAGAAGCACTCTGACGACACCTGTTTTGGGAGAAACCTCG 116664
Query 2600 GCAGAGCAGTCTTCCAGGCCAAAAAGAGGGTTCTTGAACCTCTTGGTCTGGTTGA 2654
| ||||||||||| |||||||||||| | | ||||| ||| |||| || |||||
Sbjct 116663 GAAGAGCAGTCTTTCAGGCCAAAAAGCGACTGCTTGAGCCTTTTGGCCTCGTTGA 116609
>seq615
Length=480679
Score = 428 bits (474), Expect = 1e-116
Identities = 585/817 (72%), Gaps = 40/817 (5%)
Strand=Plus/Plus
Query 1041 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGCGGGATCACGTCAGAAAAGCAATGGATC 1100
||||||| ||||| || ||||| || | | | |||||||| | ||||||||
Sbjct 3651 TACATGGCACTGGTTAACTGCCTGGTAGAGAACAGCACTACGTCAGAGAGACAATGGATT 3710
Query 1101 CAGGAGGACCAGGCGTCCTACATCTCCTTCAACGCCGCCTCCA-------------ACTC 1147
|||||| |||||| |||||| |||| | ||| ||| | || | |
Sbjct 3711 CAGGAGAACCAGGAGTCCTATCTCTCTTACAATGCCACGGGCATTGCAAGAGAGATAGGC 3770
Query 1148 GCGGTCACAAATCAAGGCCGCGCTGGACAATGCCTCCAAAATCATGAGCCTGACAAAGAC 1207
| |||| || |||||| | || ||||| ||||| |||||||
Sbjct 3771 GTGGTCGCAGATCAAGTCGGCTCTGGAAGATGCCAGCAAAATCT---------------- 3814
Query 1208 GGCTCCGGACTACCTGGTGGGC-CAGAACCCGCCGGAGGACATTTCCAGCAACCGCATCT 1266
|| ||||||| ||| | || | | ||| ||| ||||||||| || ||||||| ||
Sbjct 3815 -GCCGCGGACTATCTGTTCGGTTCTGTACC-GCCTGAGGACATTACCGTGAACCGCAGCT 3872
Query 1267 ACCGAATCCTCGAGATGAACGGGTACGATCCGCAGTACGCGGCCTCCGTCTTCCTGGGCT 1326
| ||||| || ||||||| || || || || | ||| |||| | | || | |
Sbjct 3873 AATGAATCTTCTAGATGAATGGCTATGACGCGGCCTGCGCCAGCTCCATTCTGCTCCGGT 3932
Query 1327 GGGCGCAAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCACGACGG 1386
|| ||||| |||||||| ||||||||| |||||||||||||||| || | || || |
Sbjct 3933 GGTGCCAAAA-AAGTTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCG 3991
Query 1387 GTAAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACT 1446
| || |||||||| ||||| || || ||||| |||||||||||||| |||||||| | ||
Sbjct 3992 GCAAGACCAACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCT 4051
Query 1447 GGACCAATGAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGG 1506
||||||||||||| ||||| || ||||| ||| | ||||||||||||||| |||||||||
Sbjct 4052 GGACCAATGAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGG 4110
Query 1507 AGGGCAAGATGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGG 1566
|| |||||||||||||||||||||| ||| ||||||||||||| || || | ||
Sbjct 4111 AGTGCAAGATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGG 4170
Query 1567 TGCGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCA 1626
||| || |||| || |||||||| | | ||||| ||||| |||| || ||| |||
Sbjct 4171 TGCAAGTCAACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCA 4230
Query 1627 CCTCCAACACCAACATGTGCGCGGTCATCGACGGAAACTCGACCACCTTCGAGCACCAAC 1686
||||| ||| |||| |||||| |||||||||||| ||||| | || || || ||||| |
Sbjct 4231 CCTCCTACATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGC 4290
Query 1687 AACCACTCCAGGACCGGATGTTCAAGTTCGAGCTCACCAAGCGC---CTGGAGCACGACT 1743
| || || ||||| |||||||||| || || || || |||| ||| || | |
Sbjct 4291 AGCCGCTGCAGGATTGGATGTTCAAATTTGAACTAAC---GCGCTGTTTGGCGCCAGGTT 4347
Query 1744 TTGGCAAGGTCACCAAGCAGGAAGTCAAAGACTTTTTCCGGTGGGCGTCAGATCACGTGA 1803
|||| || || || ||| || ||||||| ||| || |||||| | || ||| |
Sbjct 4348 TTGGGAAAGTGACTAAGTGAGAGGTCAAAGGCTTCTTTGCCTGGGCGCCGGAACACCCCA 4407
Query 1804 CCGAGGTGACTCACGAGTTTTACGTCAGAAAGGGTGG 1840
|||||||| ||| ||||| |||||| | ||||||
Sbjct 4408 GGGAGGTGACGCACCAGTTTGACGTCACTAGGGGTGG 4444
Score = 187 bits (206), Expect = 8e-44
Identities = 468/693 (68%), Gaps = 31/693 (4%)
Strand=Plus/Plus
Query 2891 GTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTCTGAGG 2950
|| |||| |||||||| ||||| ||||||||||| | ||| |||| ||| | |
Sbjct 5620 GTTCCGACGGAGTGGGCTCTGCCTGCAGTGATTGGCATGGAGATACCACATGGATGGGAG 5679
Query 2951 GCCACGTCACGACCACCAGCACCAGAACCTGGGTCTTGCCCACCTACAACAACCACCTCT 3010
|| |||| || | ||| | || || || |||||||||||||||||||| |||
Sbjct 5680 ACCGTGTCATTACAAAGTCCACACGGACAGGGATCCTGCCCACCTACAACAACCACATCT 5739
Query 3011 ACAAGCGACTCGGAGAGAGCCTGCAGTC-CAACACCTACAACGGATTCTCCACCC---CC 3066
||| ||| || || || | | || || | ||||| | || |
Sbjct 5740 ACAGGCGGATCACC-AGCTCCACCGGCATCAGCAACGACAACACCTACTTTGGTTAGGCG 5798
Query 3067 TGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACGTGACTGGCAGCGA 3126
|| | || ||||||||||||||||||||||||||||| | ||| || |||||| ||||
Sbjct 5799 TGCTG-TATTTTGACTTCAACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGT 5857
Query 3127 CTCATCAACAACAACTGGGGCATGCGACCCAAAGCCATGCGG-GTCAAAATCTTCAACAT 3185
||| |||| |||| |||||| || || || |||| | ||| |||| | |||| |||
Sbjct 5858 CTCGTCAATAACAGCTGGGGTATCCG-GCCTAAGCAACTCGGTTTCAAGTTATTCACCAT 5916
Query 3186 CCAGGTCAAGGAGGTCACGAC-GTCGAACGGCGAGACAACGGTGGCTAATAACCTTACCA 3244
|| ||||||||||||||||| ||| ||| || | || | || |||||||| ||||
Sbjct 5917 ACAAGTCAAGGAGGTCACGACAGTC-AACAGCACAAAGACCATCGCCAATAACCTCACCA 5975
Query 3245 GCACGGTTCAGATCTTTGCGGACTCGTCGTAC---GAACTGCCGTACGTGA-TGG--ATG 3298
|||| | ||| | |||| |||| | || || | || || | ||| ||| |||
Sbjct 5976 GCACCATCCAGGTGTTTGTGGACAC-ACGGACTGTCAGCTCCCACCCTTGACTGGCAATG 6034
Query 3299 CGGGTCAAGAGGGCAGCCTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTACG 3358
| || || || |||| || ||||||||| | |||||||||||||||| || |||
Sbjct 6035 C---CCACGAAGGGTGCCTACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACA 6091
Query 3359 GCTACTGTGGACTGGTGACCGGCAACACTTCGCAGCAACAGACTG-ACAGAAATGCCTTC 3417
| || || |||| ||||| ||| ||| || ||| | ||| |
Sbjct 6092 GATA------AC---TGACTTTCAACAACGGGCA-CAATGTCGTGCCCAGGAGCACCTAC 6141
Query 3418 TACTGCCTGGAGTACTTTCCTTCGCAGATGCTGCGGACTGGCAACAACTTTGAAATTACG 3477
|| || | |||| |||||| | ||||| | || ||||||||||||| |
Sbjct 6142 TATTGTCGGGAGCGCTTTCCCAGCAAAATGCTAAGAACAGGCAACAACTTTGCCTTCGGC 6201
Query 3478 TACAGTTTTGAGAAGGTGCCTTTCCACTCGATGTACGCGCACAGCCAGAGCCTGGACCGG 3537
|| |||||| |||| ||||| || || |||||| |||||||| || ||||||
Sbjct 6202 TATGACTTTGAGGAGGTACCTTTTCAGTCAATGTACATACACAGCCATGGCACTGACCGG 6261
Query 3538 CTGATGAACCCTCTCATCGACCAGTACCTGTGG 3570
||||||||| | || | || ||||| |||||
Sbjct 6262 CTGATGAACTCGCTGTTGAACTAGTACTTGTGG 6294
Score = 165 bits (182), Expect = 2e-37
Identities = 327/481 (68%), Gaps = 40/481 (8%)
Strand=Plus/Plus
Query 2220 GATGACTGTGACATGGAACAATAAATGACTCAAAC-CAGATATGACTGACGGTTACCTTC 2278
|||||||| | | ||||||| | |||||| || ||| |||| ||||| ||
Sbjct 4949 GATGACTGCAATAAAGAACAATGATGGACTCAGACACAG------CTGATGGTTATTTTA 5002
Query 2279 CAGATTGGCTAGAGGACAACCTCTCTGAAGGCGTTCGAGAGTGGTGGGCGCTGCAACCTG 2338
|||||||| | |||| | ||| ||| ||||| || | || |||| |
Sbjct 5003 CAGATTGGTTGGAGGGTACCCTTTCTAAAGGCTTTTGCGACTGGTAGT------------ 5050
Query 2339 GAGCCCCTAAACCCAAGGCAAATCAACAACATCAGGACAACGCTCGGGGTCTTGTGCTTC 2398
|||| ||||| | | | || || |||| || ||| ||||||||||| || ||||
Sbjct 5051 --GCCC--AAACCGAGGCCTAACCATTAACACCAAGACTCTGCTCGGGGTCTGGTCCTTC 5106
Query 2399 CGGGTTACAAATACCTCGGACCCGGCAACGGACTCGACAAGGGGGAACCCGTCAACGCAG 2458
|||| || ||||| ||||| ||| |||| | || || || || || | || ||| ||
Sbjct 5107 CGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGGAGACGCGGTTAACAGAG 5166
Query 2459 CGGACGCGGCAGCCCTCGAGCACGACAAGGCCTACGACC---AGCAGCTCAAGGCCGGTG 2515
| ||||| |||| ||||| ||| | | || ||| ||||||| |||| || |
Sbjct 5167 CAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGAGCAGCTGGAGGCGGGAG 5223
Query 2516 ACA----ACCCCTACCTCAAGTACAACCACGCCGACGCGGAGTTCCAGCAGCGGCTTCAG 2571
||| | || |||||||||| |||| || | ||| ||||| || || |||
Sbjct 5224 ACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGTTTCAAAAGAAGCTCTCT 5283
Query 2572 GGCGACACATCGTTTGGGGGCAACCTCGGCAGAGCAGTCTTCCAGGCCAAAAAGAGGGT- 2630
| | |||| || |||||| | |||||||| | ||||||||||||||||| ||||| |
Sbjct 5284 GACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCCAGGCCAAGAAGAGTCTG 5343
Query 2631 TC---TTGAACCTCTTGGTCTGGTTGAGCAAGCGGG---TGAGACGGCTCCTGGAAAGAA 2684
|| |||| ||| || |||||| |||| ||| ||| | ||| |||||||| ||||
Sbjct 5344 TCTGTTTGAGCCTTTTAGTCTGGCTGAGTAAGAGGGCGCTACGACAGCTCCTGGGGAGAA 5403
Query 2685 G 2685
|
Sbjct 5404 G 5404
Score = 114 bits (126), Expect = 4e-22
Identities = 277/414 (67%), Gaps = 14/414 (3%)
Strand=Plus/Plus
Query 4058 TGCCTGGAATGGTCTGGCAAAACAGAGACATTTACTACCAGGGTCCCATTTGGGCCAAGA 4117
||||||| ||| ||||| ||| ||||||| ||| |||| | | || |||||||||
Sbjct 6747 TGCCTGGCATGAATTGGCAGAACCGAGACATCTACCTCCAGAGCCTGATCTGGGCCAAGG 6806
Query 4118 TTCCTCATACCGATGGACACTTTCACCCCTCACCGCTGATTGGTGGGTTTGGGCTGAAAC 4177
|||| || || || || |||||||| | || || || || || || || || || ||
Sbjct 6807 TTCCACACACTGACGGGCACTTTCATCTGTCTCCTCTCATGGGGGGATTCGGTCTCAAGA 6866
Query 4178 ACCCGCCTCCTCAAATTTTTATCAAGAACACCCCGGTACCTGCGAATCCTGCAACGACCT 4237
| | |||| ||| || | |||||||||||||||| ||||| ||||| || | |
Sbjct 6867 AGGCCCCTCTTCAGATCCTGGTCAAGAACACCCCGGTTCCTGCCGATCCTCCAGTGGAAT 6926
Query 4238 T---CAGC-TCTACTCCGGTAAACTCCTTCATTACTCAGTACAGCACTGGCCAGGTGTCG 4293
| ||| || | | | ||| |||||| |||||||| ||||| | || | |
Sbjct 6927 TTACAAGCGTCAA----GCTCAACAGCTTCATCACTCAGTATAGCACCAGACAAGAAACC 6982
Query 4294 GTGCAGATTGACTGGGAGATCCAGAAGGAGCGGTCCAAACGCTGGAACCCCGAGGTCCAG 4353
||| | ||| | | |||| | ||| |||| ||||| | |||||||| || | ||
Sbjct 6983 GTGGAAATTAAATAGGAGCTGCAGCTGGAGGACTCCAAGAGGTGGAACCCAGAAATTCAA 7042
Query 4354 TTTACCTCCAACT---ACGGACAGCAAAACTCTCTGTTGTGGGCTCCCGATGCGGCTGGG 4410
| || ||||||| ||| ||| | || || | | || ||||| ||||
Sbjct 7043 TACACTTCCAACTTCAACGTGCAGGCAGAC-ATCGACTTT--GCCCCCGACAACTCTGGT 7099
Query 4411 AAATACACTGAGCCTAGGGCTATCGGTACCCGCTACCTCACCCACCACCTGTAA 4464
||| | |||| |||| |||||| ||||||| | |||||| |||| |||
Sbjct 7100 GTCTACTCAGAGCTGAGGGTTATCGGAACCCGCTGGGTTACCCACAACCTCTAA 7153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15131893232820
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