Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq875 542 8e-151 seq615 486 6e-134 >seq875 Length=186252 Score = 542 bits (600), Expect = 8e-151 Identities = 745/1028 (72%), Gaps = 19/1028 (2%) Strand=Plus/Minus Query 1004 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1063 ||||||||||| || ||||||||||| ||||| || || |||| ||| ||||| Sbjct 118267 TACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGATT 118209 Query 1064 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCTTCCAACTCGCGGTCCCAGATC 1123 |||||| |||||| | | ||||| | |||||| | ||| | || || || ||| Sbjct 118208 CAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAATC 118149 Query 1124 AAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTAC 1183 ||| | ||||||||||| ||| |||| ||| || |||||||| | || | |||||| Sbjct 118148 AAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTAC 118089 Query 1184 CTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTACCGCATCCTGGAG 1243 ||||| || | || |||| | | ||| | ||||||| || |||||||| | | Sbjct 118088 CTGGTCGGGTCTGCATCGCCAGAG--CATCGAGGACAACCGCGTCCACCGCATCTTTCAC 118031 Query 1244 CTGAACGGCTACGAACCTGCCTACGCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAAGG 1303 || ||||||||||| || ||||| |||||||| || | || |||||| || | || | Sbjct 118030 CTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGCCGAAGAAAG 117971 Query 1304 TTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACGGGCAAGACCAACATC 1363 || || ||||| |||||| ||||||| |||| || || ||||||||||||||||||| Sbjct 117970 TTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCAACATT 117911 Query 1364 GCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAAC 1423 |||| || || ||||| || |||||||| || || | ||||||||||||| |||||| Sbjct 117910 GCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCGAGAAC 117851 Query 1424 TTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACG 1483 |||| |||| ||||||| || ||||||| ||||| | |||||||||||||||||||||| Sbjct 117850 TTTCTCTTC-ATGATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGATGACG 117792 Query 1484 GCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCG-GCAGCAAGGTGCGCGTGGACCA 1542 ||||||||| ||||||| ||||||||||| || || | | ||| ||| | |||||||| Sbjct 117791 GCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCA--GTGTGAGTGGACCA 117734 Query 1543 AAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAA 1602 || |||||| | || |||| || ||||| || || ||| |||||||||||||||| Sbjct 117733 GAAATGCAAG-CCTCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACACCAA 117675 Query 1603 CATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGA 1662 |||||||| || | |||||| ||| | ||||| || ||||| |||||||| ||||| Sbjct 117674 CATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTACAGGA 117615 Query 1663 CCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATGACTTTGGCAAGGTGACAAA 1722 ||| |||||||| || ||||| || |||| |||||| |||||||| || ||||| || Sbjct 117614 CCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGACTAA 117555 Query 1723 GCAGGAAGTCAAAGAGTTCTTCCGCTGGGCGCAGGATCACGTGACCGAGGTGGCGCATGA 1782 || ||| |||||||| || ||| |||||| | ||| | | ||| | || || Sbjct 117554 GCGGGAGGTCAAAGACTTTTTCGCCTGGGCCACCGCCAACGAG-CATCGGT--CTCACGA 117498 Query 1783 GTTCTACGTCAGAAAGGGTGGAGCCAACAAAAGACCCGCCCCCGATGACGCGGATAAAAG 1842 ||| | || || |||| | || |||||| ||| |||| || || | ||||||| Sbjct 117497 GTTTTTTGTGAGGAAGGCAGTCTCCTCCAAAAGGCCCACCCCGGAAGA---GTATAAAAG 117441 Query 1843 CGAGCCCAAGCGGGCCTGCCCCTCAGTCGCGGATCCATCGACGTCAGACGCGGAAGGAGC 1902 | |||||||| || | ||| | ||| || |||| || | || | Sbjct 117440 TCCGGAGAAGCGGGCGTGGGTCGCAGCTGGAGATTCACACTCGTC---CGAGACAGACGA 117384 Query 1903 TCCGGTGGACTTTGCCGACAGGTACCAAAACAAA-TGTTCTCGTCACGCGGGCATGCTTC 1961 || | ||||||| |||||| |||| |||| |||||| ||| ||| | | Sbjct 117383 TCTTATCCACTTTGCTCTCAGGTA-CAAATCAAAGTGTTCTAAACACTTGGGGCTCGATA 117325 Query 1962 AGATGCTGTTTCCCTGCAAGACATGCGAGAGAATGAATCAGAATTTCAACATTTGCTTCA 2021 | ||||| |||| || || | || |||| |||||||||| || |||| ||||| | Sbjct 117324 AAATGCTCTTTCTGTGTAAAATTTGTGAGAAAATGAATCAGGATGTCAATATTTGTCTGG 117265 Query 2022 CGCACGGG 2029 ||||||| Sbjct 117264 AGCACGGG 117257 Score = 284 bits (314), Expect = 4e-73 Identities = 467/676 (69%), Gaps = 12/676 (2%) Strand=Plus/Minus Query 2876 CGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAG 2935 ||| | |||||| | |||| |||||||||| |||| |||||| |||| ||||| || Sbjct 116358 CGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGGCAACCA 116299 Query 2936 AGTCATCACCANNNNNNNNNNNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACAA 2995 || ||||| ||||||| ||||| |||||| ||||| Sbjct 116298 CGTGCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCAC-TACAACCACCACCAGTACAA 116240 Query 2996 GCAAATCTCCAGTGCTTCAACGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCAC 3055 || ||| | |||| ||| |||| || | | || | | || | ||||| || Sbjct 116239 GCGCATCGAC------TCAAAGGGAGCCACCAGCAAGGACAATTTCTACAGCTACTCTAC 116186 Query 3056 CCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGCA 3115 || ||||| || ||||| || ||| | ||||| | | |||||||||| || |||||||| Sbjct 116185 TCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGACTGGCA 116127 Query 3116 GCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCAA 3175 | | || |||| |||||||||| || || |||||||||| |||||| || || || Sbjct 116126 GTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCTTCAAGCTGTTTAA 116067 Query 3176 CATCCAAGTCAAGGAGGTCACGACGAATGATGGCGTCACAACCATCGCTAATAACCTTAC 3235 | |||| || ||||||||||| ||| | || || | ||| |||||| | |||||||| || Sbjct 116066 CGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAACCTCAC 116007 Query 3236 CAGCACGGTTCAAGTCTTCTCGGACTCGGAGTACCAGCTTCCGTACGTCCTCGGCTCTGC 3295 |||||| | || ||||| |||||||||| |||||| | | | |||| || ||| || Sbjct 116006 CAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGGCAACGC 115947 Query 3296 GCACCAGGGCTGCCTCCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATACGGCTA 3355 |||| |||| || ||||| |||||||| | || |||| | | || || |||| ||| Sbjct 115946 GCACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTACGCCTA 115887 Query 3356 CCTGACGCTCAACAATGGCAGCCAAGCCGTGGGACGTTCATC--CTTTTACTGCCTGGAA 3413 | ||||||||||| || | | |||| | || || | ||| |||||||| || Sbjct 115886 CGACACGCTCAACAACGGGGACAACGCCGCAGCTCG--CAGCAGCTTCTACTGCCTCGAG 115829 Query 3414 TATTTCCCTTCTCAGATGCTGAGAACGGGCAACAACTTTACCTTCAGCTACACCTTTGAG 3473 || | || ||||||||| | | ||||||||||| ||| || ||| |||||| Sbjct 115828 TACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACGTACGAGTTTGAG 115769 Query 3474 GAAGTGCCTTTCCACAGCAGCTACGCGCACAGCCAGAGCCTGGACCGGCTGATGAATCCT 3533 || || || || ||| | ||| |||| ||||||| || ||| ||| | || || Sbjct 115768 GACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCACCTGGTTAACCCG 115709 Query 3534 CTCATCGACCAATACC 3549 |||| |||| |||| Sbjct 115708 TTCATGGACCGGTACC 115693 Score = 168 bits (186), Expect = 2e-38 Identities = 295/424 (70%), Gaps = 9/424 (2%) Strand=Plus/Minus Query 2198 GAGCAATAAATGACTTAAACCAGGTATGGCTGCCGATGGTTATCTTCCAGATTGGCTCGA 2257 || |||| | ||||| |||| || |||||||| ||||| || |||||| ||| | || Sbjct 117024 GAACAATGATTGACTCAAAC-AGATATGGCTG---ATGGTCATTTTCCAGGCTGGTTGGA 116969 Query 2258 GGACAACCTCTCTGAGGGCATTCGCGAGTGGTGGGACTTGAAACCTGGAGCCCCGAAGCC 2317 ||||| |||||||||| ||| ||||| | || ||||||| || || || Sbjct 116968 GGACACTTTCTCTGAGGGTCGGCGCCAGTGGAATAGATGCAAGGCTGGAGCGCCCAAACC 116909 Query 2318 CAAAGCCAACCAGCAAAAGCAGGACGACGGCCGGGGTCTGGTGCTTCCTGGCTACAAGTA 2377 | |||||| | || ||| ||||||||||| ||||| || || || || Sbjct 116908 GCGGCCTCACCAGCGTCACCAAGACTCTTCTCGGGGTCTGGTCCTTCCGGGATATAAATA 116849 Query 2378 CCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCA-ACGCGGCGGACGCAGCGG 2436 |||||||| ||||| || || || ||||| || | |||| ||| || ||||| | | Sbjct 116848 TCTCGGACCGTTCAATGGTCTGGATAAGGGAGACCGGGTCAGTCGC-GCAGACGCCGTCG 116790 Query 2437 CCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAAGCGGGTGACAATCCGTACCTGC 2496 | || ||||||| | | |||| | |||||||| | ||||| ||||| || ||||| Sbjct 116789 CTCTAGAGCACGTC---GGCTACAGCGAGCAGCTCGAGGCGGGAGACAACCCCTACCTCA 116733 Query 2497 GGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGTCTTTTGGGG 2556 || ||||| |||||| || || |||||| | || || || | ||||||| Sbjct 116732 AGTGCAACCATGCCGACAGAGAATTCCAGGAGAAGCACTCTGACGACACCTGTTTTGGGA 116673 Query 2557 GCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTCTCGGTCTGG 2616 | |||||||| |||||||||| |||||||| ||||| | || || ||| | || || | Sbjct 116672 GAAACCTCGGAAGAGCAGTCTTTCAGGCCAAAAAGCGACTGCTTGAGCCTTTTGGCCTCG 116613 Query 2617 TTGA 2620 |||| Sbjct 116612 TTGA 116609 Score = 158 bits (174), Expect = 4e-35 Identities = 214/296 (72%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 4032 GGCATGGTGTGGCAAGATAGAGACGTGTACCTGCAGGGTCCCATTTGGGCCAAAATTCCT 4091 |||||||| ||||| | | | | | ||||||||||| || || |||||||| ||||| Sbjct 115252 GGCATGGTCTGGCAGAACCGCGGCATTTACCTGCAGGGCCCGATCTGGGCCAAGATTCCC 115193 Query 4092 CACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGAACCCG 4151 ||||||| || ||| |||||||| || || ||||| || || || ||| ||| | Sbjct 115192 CACACAGGCGGCAGCTTCCACCCGTCCCCGCTCATGGGAGGATTCGGGTTCAGGAA-GCT 115134 Query 4152 CCTCCTCAGATCCTCATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGAGTTTTCA 4211 ||||||||||| ||||| ||||| | || ||||| || |||||||| | || ||| | Sbjct 115133 CCTCCTCAGAT-CTCATAAAAAATATGCTGGTTCCCGCCAATCCTCCCGTCGACTTTGCC 115075 Query 4212 GCTACAAAGTTTGCTTCATTCATCACCCAATACTCCACAGGACAAGTGAGTGTGGAAATT 4271 | | ||||| ||||||| ||| || ||| ||||| |||| || || || Sbjct 115074 CCCAGCAAGTTCCAGAGCTTCATCAACCAGGACAGCACTGGACAGGTGACAGTAGAGCTT 115015 Query 4272 GAATGGGAGCTGCAGAAAGAAAACAGCAAGCGCTGGAATCCCGAAGTGCAGTACAC 4327 || ||| |||||||| || || ||| ||||||| ||||| ||||||||||| Sbjct 115014 GAGTGGCAGCTGCAGCGGGAGGACTCGAAGTGCTGGAACCCCGAGGTGCAGTACAC 114959 >seq615 Length=480679 Score = 486 bits (538), Expect = 6e-134 Identities = 596/813 (73%), Gaps = 32/813 (4%) Strand=Plus/Plus Query 1004 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1063 ||||||| ||||| || ||||| || ||| || || |||| || ||||| Sbjct 3651 TACATGGCACTGGTTAACTGCCTGGTAGAGAACAGCACTACGTCAGAGAGACAATGGATT 3710 Query 1064 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGC-----TTCCAACT--------C 1110 |||||| |||||| || || |||| | ||| ||| | || ||| | Sbjct 3711 CAGGAGAACCAGGAGTCCTATCTCTCTTACAATGCCACGGGCATTGCAAGAGAGATAGGC 3770 Query 1111 GCGGTCCCAGATCAAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATC 1170 | |||| ||||||||| | |||||||| ||||| |||| ||| || | Sbjct 3771 GTGGTCGCAGATCAAGTCGGCTCTGGAAGATGCCAGCAAAATC-------TG-------C 3816 Query 1171 CGCGCCCGACTACCTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTA 1230 |||| ||||| ||| | || | | ||||| | |||||||| ||||||| ||| Sbjct 3817 CGCG---GACTATCTGTTCGGTTCTGTACCGCCTGAGGACATTACCGTGAACCGCAGCTA 3873 Query 1231 CCGCATCCTGGAGCTGAACGGCTACGAACCTGCCTACGCCGGCTCCGTCTTTCTCGGCTG 1290 | ||| | || |||| ||||| || | |||| |||| ||||| | | ||| | || Sbjct 3874 ATGAATCTTCTAGATGAATGGCTATGACGCGGCCTGCGCCAGCTCCATTCTGCTCCGGTG 3933 Query 1291 GGCCCAGAAAAGGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACGGG 1350 | ||| ||||| ||||| ||| | ||| |||||||||| ||||| || | ||||| || Sbjct 3934 GTGCCAAAAAAG-TTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCGG 3992 Query 1351 CAAGACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTG 1410 |||||||||||| ||||| || || ||||| |||||||||||||| |||||||||| ||| Sbjct 3993 CAAGACCAACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCTG 4052 Query 1411 GACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGA 1470 |||||||||||| |||||||| || || ||| | ||||||||||||||| |||||||||| Sbjct 4053 GACCAATGAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGGA 4111 Query 1471 GGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGT 1530 | |||||||||||||||||||||||||||| ||||||||||| | || ||| | ||| Sbjct 4112 GTGCAAGATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGGT 4171 Query 1531 GCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCAC 1590 || || |||| || |||||||| | ||||| |||||||| | || ||| |||| Sbjct 4172 GCAAGTCAACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCAC 4231 Query 1591 CTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCA 1650 |||| ||| |||| |||||| || || ||||||||| || || || || |||||||| Sbjct 4232 CTCCTACATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGCA 4291 Query 1651 GCCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATGACTTTGG 1710 |||| ||||||| ||||||||||||||||||| || ||| || ||| || | ||||| Sbjct 4292 GCCGCTGCAGGATTGGATGTTCAAATTTGAACTAACGCGCTGTTTGGCGCCAGGTTTTGG 4351 Query 1711 CAAGGTGACAAAGCAGGAAGTCAAAGAGTTCTTCCGCTGGGCGCAGGATCACGTGACCGA 1770 || ||||| ||| || ||||||| ||||| |||||||| ||| ||| | || Sbjct 4352 GAAAGTGACTAAGTGAGAGGTCAAAGGCTTCTTTGCCTGGGCGCCGGAACACCCCAGGGA 4411 Query 1771 GGTGGCGCATGAGTTCTACGTCAGAAAGGGTGG 1803 |||| |||| |||| |||||| | |||||| Sbjct 4412 GGTGACGCACCAGTTTGACGTCACTAGGGGTGG 4444 Score = 260 bits (288), Expect = 4e-66 Identities = 480/701 (68%), Gaps = 25/701 (4%) Strand=Plus/Plus Query 2836 CAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGCGCCGACGGAGTGGGTAATGCCT 2895 |||| |||||| ||||| ||| |||| | | ||||||||||||| ||||| Sbjct 5587 CAGGAGGTGGCTCACCAGTGG---ACAACATGCGGTGTTCCGACGGAGTGGGCTCTGCCT 5643 Query 2896 CAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAGAGTCATCACCANNNNNNNNN 2955 | |||||||| | ||| |||||||| |||| ||| | ||||| || | Sbjct 5644 GCAGTGATTGGCATGGAGATACCACATGGATGGGAGACCGTGTCATTACAAAGTCCACAC 5703 Query 2956 NNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACAAGCAAATCTCCAGTGCTTCAA 3015 ||||||||||||| |||||| |||||| || ||| |||| || | Sbjct 5704 GGACAGGGATCCTGCCCACCTACAACAACCACATCTACAGGCGGATCACCAGC---TCCA 5760 Query 3016 CGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATT 3075 | || ||||||||||||| |||||| || || | | ||||||||| | Sbjct 5761 CCGGCATCAGCAACGACAACACCTACTTTGGTTAGG-------CGTGCTGTATTTTGACT 5813 Query 3076 TCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGCAGCGACTCATCAACAACAATT 3135 ||||| | |||||||||||||||| ||| || |||||| |||| ||| |||| |||| | Sbjct 5814 TCAACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGTCTCGTCAATAACAGCT 5873 Query 3136 GGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTCA 3195 |||| ||||||| ||| |||| ||||| | |||| ||| |||||||||||||||| Sbjct 5874 GGGGTATCCGGCCTAAGCAACTCGGTTTCAAGTTATTCACCATACAAGTCAAGGAGGTCA 5933 Query 3196 CGACGAATGATGGCGTCACA---ACCATCGCTAATAACCTTACCAGCACGGTTCAAGTCT 3252 |||| | | | | |||| |||||||| |||||||| |||||||| | || || | Sbjct 5934 CGAC-AGTCA--ACAGCACAAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGT 5990 Query 3253 TCTCGG--ACTCGGAGTACCAGCTTCCGTACGTCCTCGGCTCTGCGCACCAGGGCTGCCT 3310 | || || |||| | ||||| || | | ||| ||| ||| | || ||||| Sbjct 5991 TTGTGGACACACGGACTGTCAGCTCCCACCCTTGACTGGCAATGCCCACGAAGGGTGCCT 6050 Query 3311 CCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATACGGCTACCTGACGCTCAACAA 3370 || || || || || |||| || ||| | || |||||| | || ||||| ||||||| Sbjct 6051 ACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACAGATAACTGACTTTCAACAA 6110 Query 3371 TGGCAGCCAAGCCGTG-GGACGTTCATCCTTTTACTGCCTGGA-ATATTTCCCTTCTCAG 3428 || | | | |||| | | || ||| || || | ||| |||||| | | Sbjct 6111 CGGGCACAATGTCGTGCCCAGGAGCA-CCTACTATTGTCGGGAGCGCTTTCCCAGC-AAA 6168 Query 3429 ATGCTGAGAACGGGCAACAACTTTACCTTCAGCTACACCTTTGAGGAAGTGCCTTTCCAC 3488 ||||| ||||| |||||||||||| ||||| |||| ||||||||| || ||||| || Sbjct 6169 ATGCTAAGAACAGGCAACAACTTTGCCTTCGGCTATGACTTTGAGGAGGTACCTTTTCAG 6228 Query 3489 AGCAGCTACGCGCACAGCCAGAGCCTGGACCGGCTGATGAA 3529 | ||| |||||||| || |||||||||||||| Sbjct 6229 TCAATGTACATACACAGCCATGGCACTGACCGGCTGATGAA 6269 Score = 127 bits (140), Expect = 6e-26 Identities = 295/440 (67%), Gaps = 35/440 (8%) Strand=Plus/Plus Query 2229 GCCGATGGTTATCTTCCAGATTGGCTCGAGGACAACCTCTCTGAGGGCATTCGCGAGTGG 2288 || ||||||||| || |||||||| | |||| | ||| ||| | ||| || |||| ||| Sbjct 4987 GCTGATGGTTATTTTACAGATTGGTTGGAGGGTACCCTTTCTAAAGGCTTTTGCGACTGG 5046 Query 2289 TGGGACTTGAAACCTGGAGCCCCGAAGCCCAAAGCC-AACCAGCAAAAGCAGGACGACGG 2347 | | || ||| || || | ||| ||||| || | || ||| | Sbjct 5047 TAG-----------TG----CCCAAA--CCGAGGCCTAACCATTAACACCAAGACTCTGC 5089 Query 2348 CCGGGGTCTGGTGCTTCCTGGCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGG 2407 ||||||||||| ||||| || || || || ||||| ||| ||||| | || || || || Sbjct 5090 TCGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGG 5149 Query 2408 GGAGCCCGTCAACGCGGCGGACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACC---A 2464 || | || ||| || ||||| |||| ||||| ||| | | || ||| | Sbjct 5150 AGACGCGGTTAACAGAGCAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGA 5206 Query 2465 GCAGCTCAAAGCGGGTGACA----ATCCGTACCTGCGGTATAACCACGCCGACGCCGAGT 2520 |||||| | ||||| |||| |||| ||||| || ||| || | ||| |||| Sbjct 5207 GCAGCTGGAGGCGGGAGACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGT 5266 Query 2521 TTCAGGAGCGTCTGCAAGAAGATACGTCTTTTGGGGGCAACCTCGGGCGAGCAGTCTTCC 2580 |||| || || || | || ||||||||| | |||||||| |||||||||| Sbjct 5267 TTCAAAAGAAGCTCTCTGACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCC 5326 Query 2581 AGGCCAAGAAGCGGGT-TC---TCGAACCTCTCGGTCTGGTTGAG---GAAGGCGCTAAG 2633 ||||||||||| | | || | || ||| | |||||| |||| || ||||||| | Sbjct 5327 AGGCCAAGAAGAGTCTGTCTGTTTGAGCCTTTTAGTCTGGCTGAGTAAGAGGGCGCTACG 5386 Query 2634 ACGGCTCCTGGAAAGAAACG 2653 || |||||||| |||| || Sbjct 5387 ACAGCTCCTGGGGAGAAGCG 5406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14975202030705