Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_002077.1
Length=4718
Score E
Sequences producing significant alignments: (Bits) Value
seq875 542 8e-151
seq615 486 6e-134
>seq875
Length=186252
Score = 542 bits (600), Expect = 8e-151
Identities = 745/1028 (72%), Gaps = 19/1028 (2%)
Strand=Plus/Minus
Query 1004 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1063
||||||||||| || ||||||||||| ||||| || || |||| ||| |||||
Sbjct 118267 TACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGATT 118209
Query 1064 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCTTCCAACTCGCGGTCCCAGATC 1123
|||||| |||||| | | ||||| | |||||| | ||| | || || || |||
Sbjct 118208 CAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAATC 118149
Query 1124 AAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTAC 1183
||| | ||||||||||| ||| |||| ||| || |||||||| | || | ||||||
Sbjct 118148 AAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTAC 118089
Query 1184 CTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTACCGCATCCTGGAG 1243
||||| || | || |||| | | ||| | ||||||| || |||||||| | |
Sbjct 118088 CTGGTCGGGTCTGCATCGCCAGAG--CATCGAGGACAACCGCGTCCACCGCATCTTTCAC 118031
Query 1244 CTGAACGGCTACGAACCTGCCTACGCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAAGG 1303
|| ||||||||||| || ||||| |||||||| || | || |||||| || | || |
Sbjct 118030 CTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGCCGAAGAAAG 117971
Query 1304 TTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACGGGCAAGACCAACATC 1363
|| || ||||| |||||| ||||||| |||| || || |||||||||||||||||||
Sbjct 117970 TTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCAACATT 117911
Query 1364 GCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAAC 1423
|||| || || ||||| || |||||||| || || | ||||||||||||| ||||||
Sbjct 117910 GCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCGAGAAC 117851
Query 1424 TTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACG 1483
|||| |||| ||||||| || ||||||| ||||| | ||||||||||||||||||||||
Sbjct 117850 TTTCTCTTC-ATGATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGATGACG 117792
Query 1484 GCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCG-GCAGCAAGGTGCGCGTGGACCA 1542
||||||||| ||||||| ||||||||||| || || | | ||| ||| | ||||||||
Sbjct 117791 GCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCA--GTGTGAGTGGACCA 117734
Query 1543 AAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAA 1602
|| |||||| | || |||| || ||||| || || ||| ||||||||||||||||
Sbjct 117733 GAAATGCAAG-CCTCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACACCAA 117675
Query 1603 CATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGA 1662
|||||||| || | |||||| ||| | ||||| || ||||| |||||||| |||||
Sbjct 117674 CATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTACAGGA 117615
Query 1663 CCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATGACTTTGGCAAGGTGACAAA 1722
||| |||||||| || ||||| || |||| |||||| |||||||| || ||||| ||
Sbjct 117614 CCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGACTAA 117555
Query 1723 GCAGGAAGTCAAAGAGTTCTTCCGCTGGGCGCAGGATCACGTGACCGAGGTGGCGCATGA 1782
|| ||| |||||||| || ||| |||||| | ||| | | ||| | || ||
Sbjct 117554 GCGGGAGGTCAAAGACTTTTTCGCCTGGGCCACCGCCAACGAG-CATCGGT--CTCACGA 117498
Query 1783 GTTCTACGTCAGAAAGGGTGGAGCCAACAAAAGACCCGCCCCCGATGACGCGGATAAAAG 1842
||| | || || |||| | || |||||| ||| |||| || || | |||||||
Sbjct 117497 GTTTTTTGTGAGGAAGGCAGTCTCCTCCAAAAGGCCCACCCCGGAAGA---GTATAAAAG 117441
Query 1843 CGAGCCCAAGCGGGCCTGCCCCTCAGTCGCGGATCCATCGACGTCAGACGCGGAAGGAGC 1902
| |||||||| || | ||| | ||| || |||| || | || |
Sbjct 117440 TCCGGAGAAGCGGGCGTGGGTCGCAGCTGGAGATTCACACTCGTC---CGAGACAGACGA 117384
Query 1903 TCCGGTGGACTTTGCCGACAGGTACCAAAACAAA-TGTTCTCGTCACGCGGGCATGCTTC 1961
|| | ||||||| |||||| |||| |||| |||||| ||| ||| | |
Sbjct 117383 TCTTATCCACTTTGCTCTCAGGTA-CAAATCAAAGTGTTCTAAACACTTGGGGCTCGATA 117325
Query 1962 AGATGCTGTTTCCCTGCAAGACATGCGAGAGAATGAATCAGAATTTCAACATTTGCTTCA 2021
| ||||| |||| || || | || |||| |||||||||| || |||| ||||| |
Sbjct 117324 AAATGCTCTTTCTGTGTAAAATTTGTGAGAAAATGAATCAGGATGTCAATATTTGTCTGG 117265
Query 2022 CGCACGGG 2029
|||||||
Sbjct 117264 AGCACGGG 117257
Score = 284 bits (314), Expect = 4e-73
Identities = 467/676 (69%), Gaps = 12/676 (2%)
Strand=Plus/Minus
Query 2876 CGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAG 2935
||| | |||||| | |||| |||||||||| |||| |||||| |||| ||||| ||
Sbjct 116358 CGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGGCAACCA 116299
Query 2936 AGTCATCACCANNNNNNNNNNNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACAA 2995
|| ||||| ||||||| ||||| |||||| |||||
Sbjct 116298 CGTGCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCAC-TACAACCACCACCAGTACAA 116240
Query 2996 GCAAATCTCCAGTGCTTCAACGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCAC 3055
|| ||| | |||| ||| |||| || | | || | | || | ||||| ||
Sbjct 116239 GCGCATCGAC------TCAAAGGGAGCCACCAGCAAGGACAATTTCTACAGCTACTCTAC 116186
Query 3056 CCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGCA 3115
|| ||||| || ||||| || ||| | ||||| | | |||||||||| || ||||||||
Sbjct 116185 TCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGACTGGCA 116127
Query 3116 GCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCAA 3175
| | || |||| |||||||||| || || |||||||||| |||||| || || ||
Sbjct 116126 GTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCTTCAAGCTGTTTAA 116067
Query 3176 CATCCAAGTCAAGGAGGTCACGACGAATGATGGCGTCACAACCATCGCTAATAACCTTAC 3235
| |||| || ||||||||||| ||| | || || | ||| |||||| | |||||||| ||
Sbjct 116066 CGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAACCTCAC 116007
Query 3236 CAGCACGGTTCAAGTCTTCTCGGACTCGGAGTACCAGCTTCCGTACGTCCTCGGCTCTGC 3295
|||||| | || ||||| |||||||||| |||||| | | | |||| || ||| ||
Sbjct 116006 CAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGGCAACGC 115947
Query 3296 GCACCAGGGCTGCCTCCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATACGGCTA 3355
|||| |||| || ||||| |||||||| | || |||| | | || || |||| |||
Sbjct 115946 GCACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTACGCCTA 115887
Query 3356 CCTGACGCTCAACAATGGCAGCCAAGCCGTGGGACGTTCATC--CTTTTACTGCCTGGAA 3413
| ||||||||||| || | | |||| | || || | ||| |||||||| ||
Sbjct 115886 CGACACGCTCAACAACGGGGACAACGCCGCAGCTCG--CAGCAGCTTCTACTGCCTCGAG 115829
Query 3414 TATTTCCCTTCTCAGATGCTGAGAACGGGCAACAACTTTACCTTCAGCTACACCTTTGAG 3473
|| | || ||||||||| | | ||||||||||| ||| || ||| ||||||
Sbjct 115828 TACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACGTACGAGTTTGAG 115769
Query 3474 GAAGTGCCTTTCCACAGCAGCTACGCGCACAGCCAGAGCCTGGACCGGCTGATGAATCCT 3533
|| || || || ||| | ||| |||| ||||||| || ||| ||| | || ||
Sbjct 115768 GACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCACCTGGTTAACCCG 115709
Query 3534 CTCATCGACCAATACC 3549
|||| |||| ||||
Sbjct 115708 TTCATGGACCGGTACC 115693
Score = 168 bits (186), Expect = 2e-38
Identities = 295/424 (70%), Gaps = 9/424 (2%)
Strand=Plus/Minus
Query 2198 GAGCAATAAATGACTTAAACCAGGTATGGCTGCCGATGGTTATCTTCCAGATTGGCTCGA 2257
|| |||| | ||||| |||| || |||||||| ||||| || |||||| ||| | ||
Sbjct 117024 GAACAATGATTGACTCAAAC-AGATATGGCTG---ATGGTCATTTTCCAGGCTGGTTGGA 116969
Query 2258 GGACAACCTCTCTGAGGGCATTCGCGAGTGGTGGGACTTGAAACCTGGAGCCCCGAAGCC 2317
||||| |||||||||| ||| ||||| | || ||||||| || || ||
Sbjct 116968 GGACACTTTCTCTGAGGGTCGGCGCCAGTGGAATAGATGCAAGGCTGGAGCGCCCAAACC 116909
Query 2318 CAAAGCCAACCAGCAAAAGCAGGACGACGGCCGGGGTCTGGTGCTTCCTGGCTACAAGTA 2377
| |||||| | || ||| ||||||||||| ||||| || || || ||
Sbjct 116908 GCGGCCTCACCAGCGTCACCAAGACTCTTCTCGGGGTCTGGTCCTTCCGGGATATAAATA 116849
Query 2378 CCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCA-ACGCGGCGGACGCAGCGG 2436
|||||||| ||||| || || || ||||| || | |||| ||| || ||||| | |
Sbjct 116848 TCTCGGACCGTTCAATGGTCTGGATAAGGGAGACCGGGTCAGTCGC-GCAGACGCCGTCG 116790
Query 2437 CCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAAGCGGGTGACAATCCGTACCTGC 2496
| || ||||||| | | |||| | |||||||| | ||||| ||||| || |||||
Sbjct 116789 CTCTAGAGCACGTC---GGCTACAGCGAGCAGCTCGAGGCGGGAGACAACCCCTACCTCA 116733
Query 2497 GGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGTCTTTTGGGG 2556
|| ||||| |||||| || || |||||| | || || || | |||||||
Sbjct 116732 AGTGCAACCATGCCGACAGAGAATTCCAGGAGAAGCACTCTGACGACACCTGTTTTGGGA 116673
Query 2557 GCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTCTCGGTCTGG 2616
| |||||||| |||||||||| |||||||| ||||| | || || ||| | || || |
Sbjct 116672 GAAACCTCGGAAGAGCAGTCTTTCAGGCCAAAAAGCGACTGCTTGAGCCTTTTGGCCTCG 116613
Query 2617 TTGA 2620
||||
Sbjct 116612 TTGA 116609
Score = 158 bits (174), Expect = 4e-35
Identities = 214/296 (72%), Gaps = 2/296 (1%)
Strand=Plus/Minus
Query 4032 GGCATGGTGTGGCAAGATAGAGACGTGTACCTGCAGGGTCCCATTTGGGCCAAAATTCCT 4091
|||||||| ||||| | | | | | ||||||||||| || || |||||||| |||||
Sbjct 115252 GGCATGGTCTGGCAGAACCGCGGCATTTACCTGCAGGGCCCGATCTGGGCCAAGATTCCC 115193
Query 4092 CACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGAACCCG 4151
||||||| || ||| |||||||| || || ||||| || || || ||| ||| |
Sbjct 115192 CACACAGGCGGCAGCTTCCACCCGTCCCCGCTCATGGGAGGATTCGGGTTCAGGAA-GCT 115134
Query 4152 CCTCCTCAGATCCTCATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGAGTTTTCA 4211
||||||||||| ||||| ||||| | || ||||| || |||||||| | || ||| |
Sbjct 115133 CCTCCTCAGAT-CTCATAAAAAATATGCTGGTTCCCGCCAATCCTCCCGTCGACTTTGCC 115075
Query 4212 GCTACAAAGTTTGCTTCATTCATCACCCAATACTCCACAGGACAAGTGAGTGTGGAAATT 4271
| | ||||| ||||||| ||| || ||| ||||| |||| || || ||
Sbjct 115074 CCCAGCAAGTTCCAGAGCTTCATCAACCAGGACAGCACTGGACAGGTGACAGTAGAGCTT 115015
Query 4272 GAATGGGAGCTGCAGAAAGAAAACAGCAAGCGCTGGAATCCCGAAGTGCAGTACAC 4327
|| ||| |||||||| || || ||| ||||||| ||||| |||||||||||
Sbjct 115014 GAGTGGCAGCTGCAGCGGGAGGACTCGAAGTGCTGGAACCCCGAGGTGCAGTACAC 114959
>seq615
Length=480679
Score = 486 bits (538), Expect = 6e-134
Identities = 596/813 (73%), Gaps = 32/813 (4%)
Strand=Plus/Plus
Query 1004 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1063
||||||| ||||| || ||||| || ||| || || |||| || |||||
Sbjct 3651 TACATGGCACTGGTTAACTGCCTGGTAGAGAACAGCACTACGTCAGAGAGACAATGGATT 3710
Query 1064 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGC-----TTCCAACT--------C 1110
|||||| |||||| || || |||| | ||| ||| | || ||| |
Sbjct 3711 CAGGAGAACCAGGAGTCCTATCTCTCTTACAATGCCACGGGCATTGCAAGAGAGATAGGC 3770
Query 1111 GCGGTCCCAGATCAAGGCCGCTCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATC 1170
| |||| ||||||||| | |||||||| ||||| |||| ||| || |
Sbjct 3771 GTGGTCGCAGATCAAGTCGGCTCTGGAAGATGCCAGCAAAATC-------TG-------C 3816
Query 1171 CGCGCCCGACTACCTGGTAGGCCCCGCTCCGCCCGCGGACATTAAAACCAACCGCATCTA 1230
|||| ||||| ||| | || | | ||||| | |||||||| ||||||| |||
Sbjct 3817 CGCG---GACTATCTGTTCGGTTCTGTACCGCCTGAGGACATTACCGTGAACCGCAGCTA 3873
Query 1231 CCGCATCCTGGAGCTGAACGGCTACGAACCTGCCTACGCCGGCTCCGTCTTTCTCGGCTG 1290
| ||| | || |||| ||||| || | |||| |||| ||||| | | ||| | ||
Sbjct 3874 ATGAATCTTCTAGATGAATGGCTATGACGCGGCCTGCGCCAGCTCCATTCTGCTCCGGTG 3933
Query 1291 GGCCCAGAAAAGGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCACCACGGG 1350
| ||| ||||| ||||| ||| | ||| |||||||||| ||||| || | ||||| ||
Sbjct 3934 GTGCCAAAAAAG-TTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCGG 3992
Query 1351 CAAGACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTG 1410
|||||||||||| ||||| || || ||||| |||||||||||||| |||||||||| |||
Sbjct 3993 CAAGACCAACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCTG 4052
Query 1411 GACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGA 1470
|||||||||||| |||||||| || || ||| | ||||||||||||||| ||||||||||
Sbjct 4053 GACCAATGAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGGA 4111
Query 1471 GGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGT 1530
| |||||||||||||||||||||||||||| ||||||||||| | || ||| | |||
Sbjct 4112 GTGCAAGATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGGT 4171
Query 1531 GCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCAC 1590
|| || |||| || |||||||| | ||||| |||||||| | || ||| ||||
Sbjct 4172 GCAAGTCAACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCAC 4231
Query 1591 CTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCA 1650
|||| ||| |||| |||||| || || ||||||||| || || || || ||||||||
Sbjct 4232 CTCCTACATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGCA 4291
Query 1651 GCCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATGACTTTGG 1710
|||| ||||||| ||||||||||||||||||| || ||| || ||| || | |||||
Sbjct 4292 GCCGCTGCAGGATTGGATGTTCAAATTTGAACTAACGCGCTGTTTGGCGCCAGGTTTTGG 4351
Query 1711 CAAGGTGACAAAGCAGGAAGTCAAAGAGTTCTTCCGCTGGGCGCAGGATCACGTGACCGA 1770
|| ||||| ||| || ||||||| ||||| |||||||| ||| ||| | ||
Sbjct 4352 GAAAGTGACTAAGTGAGAGGTCAAAGGCTTCTTTGCCTGGGCGCCGGAACACCCCAGGGA 4411
Query 1771 GGTGGCGCATGAGTTCTACGTCAGAAAGGGTGG 1803
|||| |||| |||| |||||| | ||||||
Sbjct 4412 GGTGACGCACCAGTTTGACGTCACTAGGGGTGG 4444
Score = 260 bits (288), Expect = 4e-66
Identities = 480/701 (68%), Gaps = 25/701 (4%)
Strand=Plus/Plus
Query 2836 CAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGCGCCGACGGAGTGGGTAATGCCT 2895
|||| |||||| ||||| ||| |||| | | ||||||||||||| |||||
Sbjct 5587 CAGGAGGTGGCTCACCAGTGG---ACAACATGCGGTGTTCCGACGGAGTGGGCTCTGCCT 5643
Query 2896 CAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAGAGTCATCACCANNNNNNNNN 2955
| |||||||| | ||| |||||||| |||| ||| | ||||| || |
Sbjct 5644 GCAGTGATTGGCATGGAGATACCACATGGATGGGAGACCGTGTCATTACAAAGTCCACAC 5703
Query 2956 NNNNNNNNNNNNTGCCCACCTACAATAACCACCTCTACAAGCAAATCTCCAGTGCTTCAA 3015
||||||||||||| |||||| |||||| || ||| |||| || |
Sbjct 5704 GGACAGGGATCCTGCCCACCTACAACAACCACATCTACAGGCGGATCACCAGC---TCCA 5760
Query 3016 CGGGGGCCAGCAACGACAACCACTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATT 3075
| || ||||||||||||| |||||| || || | | ||||||||| |
Sbjct 5761 CCGGCATCAGCAACGACAACACCTACTTTGGTTAGG-------CGTGCTGTATTTTGACT 5813
Query 3076 TCAACAGATTCCACTGCCACTTTTCACCACGTGACTGGCAGCGACTCATCAACAACAATT 3135
||||| | |||||||||||||||| ||| || |||||| |||| ||| |||| |||| |
Sbjct 5814 TCAACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGTCTCGTCAATAACAGCT 5873
Query 3136 GGGGATTCCGGCCCAAGAGACTCAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTCA 3195
|||| ||||||| ||| |||| ||||| | |||| ||| ||||||||||||||||
Sbjct 5874 GGGGTATCCGGCCTAAGCAACTCGGTTTCAAGTTATTCACCATACAAGTCAAGGAGGTCA 5933
Query 3196 CGACGAATGATGGCGTCACA---ACCATCGCTAATAACCTTACCAGCACGGTTCAAGTCT 3252
|||| | | | | |||| |||||||| |||||||| |||||||| | || || |
Sbjct 5934 CGAC-AGTCA--ACAGCACAAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGT 5990
Query 3253 TCTCGG--ACTCGGAGTACCAGCTTCCGTACGTCCTCGGCTCTGCGCACCAGGGCTGCCT 3310
| || || |||| | ||||| || | | ||| ||| ||| | || |||||
Sbjct 5991 TTGTGGACACACGGACTGTCAGCTCCCACCCTTGACTGGCAATGCCCACGAAGGGTGCCT 6050
Query 3311 CCCTCCGTTCCCGGCGGACGTGTTCATGATTCCGCAATACGGCTACCTGACGCTCAACAA 3370
|| || || || || |||| || ||| | || |||||| | || ||||| |||||||
Sbjct 6051 ACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACAGATAACTGACTTTCAACAA 6110
Query 3371 TGGCAGCCAAGCCGTG-GGACGTTCATCCTTTTACTGCCTGGA-ATATTTCCCTTCTCAG 3428
|| | | | |||| | | || ||| || || | ||| |||||| | |
Sbjct 6111 CGGGCACAATGTCGTGCCCAGGAGCA-CCTACTATTGTCGGGAGCGCTTTCCCAGC-AAA 6168
Query 3429 ATGCTGAGAACGGGCAACAACTTTACCTTCAGCTACACCTTTGAGGAAGTGCCTTTCCAC 3488
||||| ||||| |||||||||||| ||||| |||| ||||||||| || ||||| ||
Sbjct 6169 ATGCTAAGAACAGGCAACAACTTTGCCTTCGGCTATGACTTTGAGGAGGTACCTTTTCAG 6228
Query 3489 AGCAGCTACGCGCACAGCCAGAGCCTGGACCGGCTGATGAA 3529
| ||| |||||||| || ||||||||||||||
Sbjct 6229 TCAATGTACATACACAGCCATGGCACTGACCGGCTGATGAA 6269
Score = 127 bits (140), Expect = 6e-26
Identities = 295/440 (67%), Gaps = 35/440 (8%)
Strand=Plus/Plus
Query 2229 GCCGATGGTTATCTTCCAGATTGGCTCGAGGACAACCTCTCTGAGGGCATTCGCGAGTGG 2288
|| ||||||||| || |||||||| | |||| | ||| ||| | ||| || |||| |||
Sbjct 4987 GCTGATGGTTATTTTACAGATTGGTTGGAGGGTACCCTTTCTAAAGGCTTTTGCGACTGG 5046
Query 2289 TGGGACTTGAAACCTGGAGCCCCGAAGCCCAAAGCC-AACCAGCAAAAGCAGGACGACGG 2347
| | || ||| || || | ||| ||||| || | || ||| |
Sbjct 5047 TAG-----------TG----CCCAAA--CCGAGGCCTAACCATTAACACCAAGACTCTGC 5089
Query 2348 CCGGGGTCTGGTGCTTCCTGGCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGG 2407
||||||||||| ||||| || || || || ||||| ||| ||||| | || || || ||
Sbjct 5090 TCGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGG 5149
Query 2408 GGAGCCCGTCAACGCGGCGGACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACC---A 2464
|| | || ||| || ||||| |||| ||||| ||| | | || ||| |
Sbjct 5150 AGACGCGGTTAACAGAGCAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGA 5206
Query 2465 GCAGCTCAAAGCGGGTGACA----ATCCGTACCTGCGGTATAACCACGCCGACGCCGAGT 2520
|||||| | ||||| |||| |||| ||||| || ||| || | ||| ||||
Sbjct 5207 GCAGCTGGAGGCGGGAGACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGT 5266
Query 2521 TTCAGGAGCGTCTGCAAGAAGATACGTCTTTTGGGGGCAACCTCGGGCGAGCAGTCTTCC 2580
|||| || || || | || ||||||||| | |||||||| ||||||||||
Sbjct 5267 TTCAAAAGAAGCTCTCTGACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCC 5326
Query 2581 AGGCCAAGAAGCGGGT-TC---TCGAACCTCTCGGTCTGGTTGAG---GAAGGCGCTAAG 2633
||||||||||| | | || | || ||| | |||||| |||| || ||||||| |
Sbjct 5327 AGGCCAAGAAGAGTCTGTCTGTTTGAGCCTTTTAGTCTGGCTGAGTAAGAGGGCGCTACG 5386
Query 2634 ACGGCTCCTGGAAAGAAACG 2653
|| |||||||| |||| ||
Sbjct 5387 ACAGCTCCTGGGGAGAAGCG 5406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14975202030705
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