Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= NC_006260.1
Length=4721
Score E
Sequences producing significant alignments: (Bits) Value
seq875 536 4e-149
seq615 462 7e-127
>seq875
Length=186252
Score = 536 bits (594), Expect = 4e-149
Identities = 736/1015 (73%), Gaps = 19/1015 (2%)
Strand=Plus/Minus
Query 1003 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1062
||||||||||| || ||||||||||| ||||| || || |||| ||| |||||
Sbjct 118267 TACATGGAGCTCGTTAACTGGCTGGTGGAGAACGGCATTACGTCAGAGA-GCAATGGATT 118209
Query 1063 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCCTCCAACTCGCGGTCCCAGATC 1122
|||||| |||||| | | ||||| | |||||| | ||| | || || || |||
Sbjct 118208 CAGGAGAACCAGGAAGCCTGTATCTCTTACAACGCGACGGGCAATGCCCGCTCGCAAATC 118149
Query 1123 AAGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATCCGCGCCCGACTAC 1182
||| | || |||||||| ||| |||| ||| || |||||||| | || | ||||||
Sbjct 118148 AAGTCGGCTCTGGACAACGCCAGCAAAATCGTGAGCCTGACCAAGACGGCCTCGGACTAC 118089
Query 1183 CTGGTGGGGCCCTCGCTGCCCGCGGACATTAAAACCAACCGCATCTACCGCATCCTGGAG 1242
||||| ||| | | ||| | | ||| | ||||||| || |||||||| | |
Sbjct 118088 CTGGTCGGGTCTGCATCGCCAGAG--CATCGAGGACAACCGCGTCCACCGCATCTTTCAC 118031
Query 1243 CTGAACGGGTACGATCCTGCCTACGCCGGCTCCGTCTTTCTCGGCTGGGCCCAGAAAAAG 1302
|| ||||| ||||| || ||||| |||||||| || | || |||||| || | ||||
Sbjct 118030 CTCAACGGCTACGACCCGGCCTATGCCGGCTCAGTGGTGCTGGGCTGGTGCCGAAGAAAG 117971
Query 1303 TTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCCGCCACCACCGGCAAGACCAACATT 1362
|| || ||||| |||||| ||||||| |||| || || |||| |||||||||||||||
Sbjct 117970 TTGGGCAAGCGGAACACCGTCTGGCTCTTTGCACCTGCGCCCACGGGCAAGACCAACATT 117911
Query 1363 GCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAAC 1422
|||| || || ||||| || |||||||| || || | ||||||||||||| ||||||
Sbjct 117910 GCGGTGGCTATTGCCCATGCTGTGCCCTTTTATGGGCGTGTCAACTGGACCAGCGAGAAC 117851
Query 1423 TTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACG 1482
|||| |||| | ||||| || ||||||| ||||| | ||||||||||||||||||||||
Sbjct 117850 TTTCTCTTC-ATGATTGTGTGGACAAGACAGTGATTTTGTGGGAGGAGGGCAAGATGACG 117792
Query 1483 GCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCG-GCAGCAAGGTGCGCGTGGACCA 1541
||||||||| ||||||| ||||||||||| || || | | ||| ||| | ||||||||
Sbjct 117791 GCCAAGGTCATGGAGTCGGCCAAGGCCATCCTGGGGGCTCGGCA--GTGTGAGTGGACCA 117734
Query 1542 AAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAA 1601
|| |||||| | || |||| || ||||| || || ||| ||||||||||||||||
Sbjct 117733 GAAATGCAAG-CCTCGCAGCAGACTGAACCCACACCGGTCATCATCACCTCCAACACCAA 117675
Query 1602 CATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGA 1661
|||||||| || | |||||| ||| | ||||| || ||||| |||||||| |||||
Sbjct 117674 CATGTGCGTGGTCACTGACGGAAACTCGAAGACCTTTGAACACCAACAGCCGTTACAGGA 117615
Query 1662 CCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCACGACTTTGGCAAGGTGACGAA 1721
||| |||||||| || ||||| || |||| |||||| |||||||| || ||||| ||
Sbjct 117614 CCGCATGTTCAAGTTGGAACTGACTTACCGTTTGGAGCCAGACTTTGGGAAAGTGACTAA 117555
Query 1722 GCAGGAAGTCAAAGAGTTCTTCCGCTGGGCCAGTGATCACGTGACCGAGGTGGCGCATGA 1781
|| ||| |||||||| || ||| |||||||| | ||| | | ||| | || ||
Sbjct 117554 GCGGGAGGTCAAAGACTTTTTCGCCTGGGCCACCGCCAACGAG-CATCGGT--CTCACGA 117498
Query 1782 GTTCTACGTCAGAAAGGGCGGAGCCAGCAAAAGACCCGCCCCCGATGACGCGGATATAAG 1841
||| | || || |||| | || |||||| ||| |||| || || | ||| |||
Sbjct 117497 GTTTTTTGTGAGGAAGGCAGTCTCCTCCAAAAGGCCCACCCCGGAAGA---GTATAAAAG 117441
Query 1842 CGAGCCCAAGCGGGCCTGCCCCTCAGTCGCGGATCCATCGACGTCAGACGCGGAAGGAGC 1901
| |||||||| || | ||| | ||| || |||| || | || |
Sbjct 117440 TCCGGAGAAGCGGGCGTGGGTCGCAGCTGGAGATTCACACTCGTC---CGAGACAGACGA 117384
Query 1902 TCCGGTGGACTTTGCCGACAGGTACCAAAACAAA-TGTTCTCGTCACGCGGGCATGATTC 1960
|| | ||||||| |||||| |||| |||| |||||| ||| ||| | |
Sbjct 117383 TCTTATCCACTTTGCTCTCAGGTA-CAAATCAAAGTGTTCTAAACACTTGGGGCTCGATA 117325
Query 1961 AGATGCTGTTTCCCTGCAAAACGTGCGAGAGAATGAATCAGAATTTCAACATTTG 2015
| ||||| |||| || |||| || |||| |||||||||| || |||| |||||
Sbjct 117324 AAATGCTCTTTCTGTGTAAAATTTGTGAGAAAATGAATCAGGATGTCAATATTTG 117270
Score = 320 bits (354), Expect = 5e-84
Identities = 481/678 (71%), Gaps = 8/678 (1%)
Strand=Plus/Minus
Query 2873 GGTGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCACATGGCTGGGC 2932
|||| ||| | |||||| | |||| |||||||||| |||| |||||| |||| |||||
Sbjct 116363 GGTGACGATGCAGTGGGGAGCTCCTCGGGAAATTGGCGTTGCAATTCCAAATGGATGGGC 116304
Query 2933 GACAGAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACAACAACCACCTC 2992
|| || | ||| | || | ||||||| ||||||||| |||||| ||||||
Sbjct 116303 AACCACGTGCTCACCGAGTCCGCCGGGACCTGGGTCCTGCCCAC-TACAACCACCACCAG 116245
Query 2993 TACAAGCAAATCTCCAGTGAAACTGCAGGTAGTACCAACGACAACACCTACTTCGGCTAC 3052
||||||| ||| | | ||| | || | | ||| ||||| |||| |||||
Sbjct 116244 TACAAGCGCATCGAC--TCAAAGGG-AGCCACCAGCAAGGACAATTTCTACA---GCTAC 116191
Query 3053 AGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTTCTCACCACGTGAC 3112
|| || ||||| || |||||||||||| | ||||| | | |||| ||||| || |||
Sbjct 116190 TCTACTCCGTGGGGATACTTTGACTTTAAC-GCTTCCAGTACTACTTTTCACCCCGAGAC 116132
Query 3113 TGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAAGCTGCGGTTCAAGCTC 3172
|||||| | || |||| |||| ||||| || || |||||| || ||||||||
Sbjct 116131 TGGCAGTGCTTCGTCAAATACAATTGGGGTCTCTGGTCCAAGAGACTTTCCTTCAAGCTG 116072
Query 3173 TTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTACGACCATCGCTAATAAC 3232
|| ||| ||||||| ||||||||||| ||| | || || | ||||||||| | ||||||
Sbjct 116071 TTTAACGTCCAGGTTAAGGAGGTCACTACGCAGGAGGGAGCCACGACCATCACCAATAAC 116012
Query 3233 CTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGCTGCCGTACGTCCTCGGC 3292
|| |||||||| || ||||| || |||||||||| |||||| | | | |||| || |||
Sbjct 116011 CTCACCAGCACCATCCAGGTCTTTGCGGACTCGGACTACCAGGTCCTGCACGTGCTAGGC 115952
Query 3293 TCTGCGCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCTTCATGATTCCTCAGTAC 3352
|||||| |||| |||||||| |||||||| | ||||||| | | || ||||||
Sbjct 115951 AACGCGCACGAGGGAACGCTGCCTCCCTTCCCGGCCCATGTCTTCACGGTCCCCCAGTAC 115892
Query 3353 GGCTACCTGACTCTCAACAATGGCAGTCAGTCTGTGGGACGTTCCTCCTTCTACTGCCTG 3412
| |||| || |||||||| || | | | | || | ||||||||||||
Sbjct 115891 GCCTACGACACGCTCAACAACGGGGACAACGCCGCAGCTCGCAGCAGCTTCTACTGCCTC 115832
Query 3413 GAGTACTTCCCCTCTCAGATGCTGAGAACGGGCAACAACTTTGAGTTCAGCTACAGCTTC 3472
|||||| | || ||||||||| | | ||||||||||| | | || ||| ||
Sbjct 115831 GAGTACATGCCGAGCCAGATGCTGCGGATGGGCAACAACTACGCCTCCACGTACGAGTTT 115772
Query 3473 GAGGACGTGCCTTTCCACAGCAGCTACGCACACAGCCAGAGCCTGGACCGGCTGATGAAT 3532
|||||||| || || ||| | ||| ||| ||||||| || ||| ||| | ||
Sbjct 115771 GAGGACGTACCCTTTCACTCGATGTACATGCACCTCCAGAGCATGCACCACCTGGTTAAC 115712
Query 3533 CCCCTCATCGACCAGTAC 3550
|| |||| |||| ||||
Sbjct 115711 CCGTTCATGGACCGGTAC 115694
Score = 178 bits (196), Expect = 4e-41
Identities = 219/297 (74%), Gaps = 2/297 (1%)
Strand=Plus/Minus
Query 4034 GGCATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATTCCT 4093
|||||||||||||||||||| | | | ||||||||||| || |||||||||||||||||
Sbjct 115252 GGCATGGTCTGGCAGAACCGCGGCATTTACCTGCAGGGCCCGATCTGGGCCAAGATTCCC 115193
Query 4094 CACACGGATGGCAACTTTCACCCGTCTCCTTTGATGGGCGGCTTTGGACTTAAACATCCG 4153
||||| | |||| ||| |||||||| || | ||||| || || || || | | |
Sbjct 115192 CACACAGGCGGCAGCTTCCACCCGTCCCCGCTCATGGGAGGATTCGG-GTTCAGGAAGCT 115134
Query 4154 CCTCCTCAGATCCTGATCAAGAACACTCCCGTTCCCGCTAATCCTCCGGAGGTGTTTACT 4213
||||||||||| || || || || | | |||||||| |||||||| | | ||| |
Sbjct 115133 CCTCCTCAGAT-CTCATAAAAAATATGCTGGTTCCCGCCAATCCTCCCGTCGACTTTGCC 115075
Query 4214 CCTGCCAAGTTTGCTTCGTTCATCACACAGTACAGCACCGGACAAGTCAGCGTGGAAATC 4273
|| |||||| ||||||| ||| ||||||| ||||| || | || || |
Sbjct 115074 CCCAGCAAGTTCCAGAGCTTCATCAACCAGGACAGCACTGGACAGGTGACAGTAGAGCTT 115015
Query 4274 GAGTGGGAGCTGCAGAAGGAAAACAGCAAGCGCTGGAACCCGGAGATTCAGTACACC 4330
|||||| |||||||| ||| || ||| |||||||||| ||| | |||||||||
Sbjct 115014 GAGTGGCAGCTGCAGCGGGAGGACTCGAAGTGCTGGAACCCCGAGGTGCAGTACACC 114958
Score = 168 bits (186), Expect = 2e-38
Identities = 297/425 (70%), Gaps = 11/425 (3%)
Strand=Plus/Minus
Query 2197 GAGCAATAAATGACTTAAACCAGGTATGGCTGCCGATGGTTATCTTCCAGATTGGCTCGA 2256
|| |||| | ||||| |||| || |||||||| ||||| || |||||| ||| | ||
Sbjct 117024 GAACAATGATTGACTCAAAC-AGATATGGCTG---ATGGTCATTTTCCAGGCTGGTTGGA 116969
Query 2257 GGACAACCTCTCTGAGGGCATTCGCGAGTGGTGGGACCTGAAAC-CTGGAGCCCCGAAAC 2315
||||| |||||||||| ||| ||||| | || || ||||||| || ||||
Sbjct 116968 GGACACTTTCTCTGAGGGTCGGCGCCAGTGGAAT-AGATGCAAGGCTGGAGCGCCCAAAC 116910
Query 2316 CCAAAGCCAACCAGCAAAAGCAGGACAACGGCCGGGGTCTGGTGCTTCCTGGCTACAAGT 2375
| | |||||| | || ||| ||||||||||| ||||| || || || |
Sbjct 116909 CGCGGCCTCACCAGCGTCACCAAGACTCTTCTCGGGGTCTGGTCCTTCCGGGATATAAAT 116850
Query 2376 ACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCA-ACGCGGCGGACGCAGCG 2434
| |||||||| ||||| || || || ||||| || | |||| ||| || ||||| |
Sbjct 116849 ATCTCGGACCGTTCAATGGTCTGGATAAGGGAGACCGGGTCAGTCGC-GCAGACGCCGTC 116791
Query 2435 GCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAAGCGGGTGACAATCCGTACCTG 2494
|| || ||||||| | | |||| | |||||||| | ||||| ||||| || |||||
Sbjct 116790 GCTCTAGAGCACGTC---GGCTACAGCGAGCAGCTCGAGGCGGGAGACAACCCCTACCTC 116734
Query 2495 CGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGTCATTTGGG 2554
|| ||||| |||||| || || |||||| | || || || | ||||||
Sbjct 116733 AAGTGCAACCATGCCGACAGAGAATTCCAGGAGAAGCACTCTGACGACACCTGTTTTGGG 116674
Query 2555 GGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAAGCGGGTTCTCGAACCTCTCGGTCTG 2614
| |||||||| |||||||||| |||||||| ||||| | || || ||| | || ||
Sbjct 116673 AGAAACCTCGGAAGAGCAGTCTTTCAGGCCAAAAAGCGACTGCTTGAGCCTTTTGGCCTC 116614
Query 2615 GTTGA 2619
|||||
Sbjct 116613 GTTGA 116609
>seq615
Length=480679
Score = 462 bits (512), Expect = 7e-127
Identities = 584/803 (73%), Gaps = 32/803 (4%)
Strand=Plus/Plus
Query 1003 TACATGGAGCTGGTCGGGTGGCTGGTGGACCGGGGCATCACCTCCGAGAAGCAGTGGATC 1062
||||||| ||||| || ||||| || ||| || || |||| || |||||
Sbjct 3651 TACATGGCACTGGTTAACTGCCTGGTAGAGAACAGCACTACGTCAGAGAGACAATGGATT 3710
Query 1063 CAGGAGGACCAGGCCTCGTACATCTCCTTCAACGCCGCCTCCA-------------ACTC 1109
|||||| |||||| || || |||| | ||| ||| | || | |
Sbjct 3711 CAGGAGAACCAGGAGTCCTATCTCTCTTACAATGCCACGGGCATTGCAAGAGAGATAGGC 3770
Query 1110 GCGGTCCCAGATCAAGGCCGCGCTGGACAATGCCGGCAAGATCATGGCGCTGACCAAATC 1169
| |||| ||||||||| | || ||||| ||||| |||| ||| || |
Sbjct 3771 GTGGTCGCAGATCAAGTCGGCTCTGGAAGATGCCAGCAAAATC-------TG-------C 3816
Query 1170 CGCGCCCGACTACCTGGTGGGGCCCTCGCTGCCCGCGGACATTAAAACCAACCGCATCTA 1229
|||| ||||| ||| | || | | ||| | |||||||| ||||||| |||
Sbjct 3817 CGCG---GACTATCTGTTCGGTTCTGTACCGCCTGAGGACATTACCGTGAACCGCAGCTA 3873
Query 1230 CCGCATCCTGGAGCTGAACGGGTACGATCCTGCCTACGCCGGCTCCGTCTTTCTCGGCTG 1289
| ||| | || |||| || || || | |||| |||| ||||| | | ||| | ||
Sbjct 3874 ATGAATCTTCTAGATGAATGGCTATGACGCGGCCTGCGCCAGCTCCATTCTGCTCCGGTG 3933
Query 1290 GGCCCAGAAAAAGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCCGCCACCACCGG 1349
| ||| ||||||||||| ||| | ||| |||||||||| ||||| || | ||||||||
Sbjct 3934 GTGCCA-AAAAAGTTCGGCAAGAGGAACGCCATCTGGCTCTTTGGACCTGTGACCACCGG 3992
Query 1350 CAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTG 1409
|||||||||||||||||| || || ||||| |||||||||||||| |||||||||| |||
Sbjct 3993 CAAGACCAACATTGCGGAGGCTATTGCCCATGCCGTGCCCTTCTATGGCTGCGTCAGCTG 4052
Query 1410 GACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGA 1469
|||||||||||| |||||||| ||||| ||| | ||||||||||||||| ||||||||||
Sbjct 4053 GACCAATGAGAATTTTCCCTT-AACGACTGCATGGACAAGATGGTGATCCGGTGGGAGGA 4111
Query 1470 GGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGCAAGGT 1529
| |||||||||||||||||||||||||||| ||||||||||| | || ||| | |||
Sbjct 4112 GTGCAAGATGACGGCCAAGGTCGTGGAGTCAGCCAAGGCCATCCGAGGGGGCTCTACGGT 4171
Query 1530 GCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCAC 1589
|| || |||| || |||||||| | ||||| |||||||| | || ||| ||||
Sbjct 4172 GCAAGTCAACCAGAAATGCAAGTCCTGGCAGCAGATTGACCCCACTCTGGTCATCATCAC 4231
Query 1590 CTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCA 1649
|||| ||| |||| |||||| || || ||||||||| || || || || ||||||||
Sbjct 4232 CTCCTACATCAACGTGTGCGTGGTCATCGACGGGAACTCCATGACTTTTGAACACCAGCA 4291
Query 1650 GCCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCACGACTTTGG 1709
|||| ||||||| ||||||||||||||||||| || ||| || ||| || | |||||
Sbjct 4292 GCCGCTGCAGGATTGGATGTTCAAATTTGAACTAACGCGCTGTTTGGCGCCAGGTTTTGG 4351
Query 1710 CAAGGTGACGAAGCAGGAAGTCAAAGAGTTCTTCCGCTGGGCCAGTGATCACGTGACCGA 1769
|| ||||| ||| || ||||||| ||||| |||||| || ||| | ||
Sbjct 4352 GAAAGTGACTAAGTGAGAGGTCAAAGGCTTCTTTGCCTGGGCGCCGGAACACCCCAGGGA 4411
Query 1770 GGTGGCGCATGAGTTCTACGTCA 1792
|||| |||| |||| ||||||
Sbjct 4412 GGTGACGCACCAGTTTGACGTCA 4434
Score = 340 bits (376), Expect = 5e-90
Identities = 512/723 (71%), Gaps = 21/723 (3%)
Strand=Plus/Plus
Query 2837 GCAGGCGGTGGCGCACCAATGGCAGACAATAACGAAGGTGCCGACGGAGTGGGTAATGCC 2896
||||| |||||| ||||| ||| |||| | || ||||||||||||| ||||
Sbjct 5586 GCAGGAGGTGGCTCACCAGTGG---ACAACATGCGGTGTTCCGACGGAGTGGGCTCTGCC 5642
Query 2897 TCAGGAAATTGGCATTGCGATTCCACATGGCTGGGCGACAGAGTCATTACCACCAGCACC 2956
| | |||||||| | ||| |||||||| |||| ||| | |||||||| | |||
Sbjct 5643 TGCAGTGATTGGCATGGAGATACCACATGGATGGGAGACCGTGTCATTACAAAGTCCACA 5702
Query 2957 CGAACCTGGGCCCTGCCCACCTACAACAACCACCTCTACAAGCAAATCTCCAGTGAAACT 3016
|| || || |||||||||||||||||||||| |||||| || ||| |||| ||
Sbjct 5703 CGGACAGGGATCCTGCCCACCTACAACAACCACATCTACAGGCGGATCACCAG-----CT 5757
Query 3017 GCA--GGTAGTACCAACGACAACACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTG 3074
|| || | | |||||||||||||||||| || || | | ||||||||
Sbjct 5758 CCACCGGCATCAGCAACGACAACACCTACTTTGGTTAGG-------CGTGCTGTATTTTG 5810
Query 3075 ACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATCAACAACA 3134
|||| ||| | |||||||||||||| | ||| || |||||| |||| ||| |||| ||||
Sbjct 5811 ACTTCAACCGCTTCCACTGCCACTTTTTACCCCGAGACTGGAAGCGTCTCGTCAATAACA 5870
Query 3135 ACTGGGGATTCCGGCCCAAGAAGCTGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGG 3194
|||||| ||||||| ||| | || | |||||| | |||| ||| || ||||||||||
Sbjct 5871 GCTGGGGTATCCGGCCTAAGCAACTCGGTTTCAAGTTATTCACCATACAAGTCAAGGAGG 5930
Query 3195 TCACGACGAATGACGGCGTTACGACCATCGCTAATAACCTTACCAGCACGATTCAGGTAT 3254
||||||| || || | ||||||||| |||||||| |||||||| || ||||| |
Sbjct 5931 TCACGACAGTCAACAGCACAAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGT 5990
Query 3255 TCTCGG--ACTCGGAATACCAGCTGCCGTACGTCCTCGGCTCTGCGCACCAGGGCTGCCT 3312
| || || |||| | ||||| || | | ||| ||| ||| | || |||||
Sbjct 5991 TTGTGGACACACGGACTGTCAGCTCCCACCCTTGACTGGCAATGCCCACGAAGGGTGCCT 6050
Query 3313 GCCTCCGTTCCCGGCGGACGTCTTCATGATTCCTCAGTACGGCTACCTGACTCTCAACAA 3372
|| || || || || ||||||| ||| | ||||| ||| | || |||||| |||||||
Sbjct 6051 ACCCCCTTTTCCCGCCAACGTCTTTATGGTGCCTCAATACAGATAACTGACTTTCAACAA 6110
Query 3373 -TGGCAGTCAGTCTGTGGGACGTTCCTCCTTCTACTGCCTGGAGTACTTCCCCTCTCAGA 3431
|||| ||| ||| | | ||| ||| || | |||| ||| ||| | |
Sbjct 6111 CGGGCACAATGTC-GTGCCCAGGAGCACCTACTATTGTCGGGAGCGCTTTCCCAGCAAAA 6169
Query 3432 TGCTGAGAACGGGCAACAACTTTGAGTTCAGCTACAGCTTCGAGGACGTGCCTTTCCACA 3491
|||| ||||| ||||||||||||| ||| |||| ||| ||||| || ||||| ||
Sbjct 6170 TGCTAAGAACAGGCAACAACTTTGCCTTCGGCTATGACTTTGAGGAGGTACCTTTTCAGT 6229
Query 3492 GCAGCTACGCACACAGCCAGAGCCTGGACCGGCTGATGAATCCCCTCATCGACCAGTACT 3551
| ||| ||||||||| || |||||||||||||| | || | || ||||||
Sbjct 6230 CAATGTACATACACAGCCATGGCACTGACCGGCTGATGAACTCGCTGTTGAACTAGTACT 6289
Query 3552 TGT 3554
|||
Sbjct 6290 TGT 6292
Score = 219 bits (242), Expect = 1e-53
Identities = 267/364 (73%), Gaps = 0/364 (0%)
Strand=Plus/Plus
Query 4031 CCTGGCATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 4090
||||||||| ||||||||||| ||| | ||||| ||| | | |||||||||||| ||
Sbjct 6749 CCTGGCATGAATTGGCAGAACCGAGACATCTACCTCCAGAGCCTGATCTGGGCCAAGGTT 6808
Query 4091 CCTCACACGGATGGCAACTTTCACCCGTCTCCTTTGATGGGCGGCTTTGGACTTAAACAT 4150
|| ||||| || || ||||||| | ||||||| | ||||| || || || || || |
Sbjct 6809 CCACACACTGACGGGCACTTTCATCTGTCTCCTCTCATGGGGGGATTCGGTCTCAAGAAG 6868
Query 4151 CCGCCTCCTCAGATCCTGATCAAGAACACTCCCGTTCCCGCTAATCCTCCGGAGGTGTTT 4210
| |||| |||||||||| |||||||||| || ||||| || ||||||| | || |||
Sbjct 6869 GCCCCTCTTCAGATCCTGGTCAAGAACACCCCGGTTCCTGCCGATCCTCCAGTGGAATTT 6928
Query 4211 ACTCCTGCCAAGTTTGCTTCGTTCATCACACAGTACAGCACCGGACAAGTCAGCGTGGAA 4270
|| | |||| | |||||||| ||||| |||||| |||||| | |||||||
Sbjct 6929 ACAAGCGTCAAGCTCAACAGCTTCATCACTCAGTATAGCACCAGACAAGAAACCGTGGAA 6988
Query 4271 ATCGAGTGGGAGCTGCAGAAGGAAAACAGCAAGCGCTGGAACCCGGAGATTCAGTACACC 4330
|| | | |||||||||| ||| || |||| | |||||||| || ||||| |||||
Sbjct 6989 ATTAAATAGGAGCTGCAGCTGGAGGACTCCAAGAGGTGGAACCCAGAAATTCAATACACT 7048
Query 4331 TCCAACTTTGAAAAGCAGACTGGTGTGGACTTTGCCGTTGACAGCCAGGGTGTTTACTCT 4390
|||||||| | |||| | | | ||||||||| |||| | ||||| |||||
Sbjct 7049 TCCAACTTCAACGTGCAGGCAGACATCGACTTTGCCCCCGACAACTCTGGTGTCTACTCA 7108
Query 4391 GAGC 4394
||||
Sbjct 7109 GAGC 7112
Score = 120 bits (132), Expect = 9e-24
Identities = 303/457 (66%), Gaps = 39/457 (9%)
Strand=Plus/Plus
Query 2228 GCCGATGGTTATCTTCCAGATTGGCTCGAGGACAACCTCTCTGAGGGCATTCGCGAGTGG 2287
|| ||||||||| || |||||||| | |||| | ||| ||| | ||| || |||| |||
Sbjct 4987 GCTGATGGTTATTTTACAGATTGGTTGGAGGGTACCCTTTCTAAAGGCTTTTGCGACTGG 5046
Query 2288 TGGGACCTGAAACCTGGAGCCCCGAAACCCAAAGCCAACCAGCAAAAGCAGGACAACGGC 2347
| | || ||||| ||| || ||||| || | || ||| |
Sbjct 5047 TAGTGCCC-AAACC--GAGGCCT-------------AACCATTAACACCAAGACTCTGCT 5090
Query 2348 CGGGGTCTGGTGCTTCCTGGCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGG 2407
||||||||||| ||||| || || || || ||||| ||| ||||| | || || || ||
Sbjct 5091 CGGGGTCTGGTCCTTCCGGGATATAAATATCTCGGTCCCCTCAACAGTCTGGATAAAGGA 5150
Query 2408 GAGCCCGTCAACGCGGCGGACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACC---AG 2464
|| | || ||| || ||||| |||| ||||| ||| | | || ||| ||
Sbjct 5151 GACGCGGTTAACAGAGCAGACGCCATTGCCCAAGAGCAGGAC---GTCAACCACCGCGAG 5207
Query 2465 CAGCTCAAAGCGGG----TGACAATCCGTACCTGCGGTATAACCACGCCGACGCCGAGTT 2520
||||| | ||||| |||||||| ||||| || ||| || | ||| |||||
Sbjct 5208 CAGCTGGAGGCGGGAGACAGACAATCCTTACCTCAAGTCCAACTACACTGACCGAGAGTT 5267
Query 2521 TCAGGAGCGTCTGCAAGAAGATACGTCATTTGGGGGCAACCTCGGGCGAGCAGTCTTCCA 2580
||| || || || | || || |||||| | |||||||| |||||||||||
Sbjct 5268 TCAAAAGAAGCTCTCTGACAACACCTCTTTTGGGCGTAACCTCGGAAAGGCAGTCTTCCA 5327
Query 2581 GGCCAAGAAGCGGGT-TC---TCGAACCTCTCGGTCTGGTTGAG---GAAGGCGCTAAGA 2633
|||||||||| | | || | || ||| | |||||| |||| || ||||||| ||
Sbjct 5328 GGCCAAGAAGAGTCTGTCTGTTTGAGCCTTTTAGTCTGGCTGAGTAAGAGGGCGCTACGA 5387
Query 2634 CGGCTCCTGCAAAGAAG------AGACCGGTAGAGCC 2664
| ||||||| ||||| |||||| | |||||
Sbjct 5388 CAGCTCCTGGGGAGAAGCGCGCTAGACCGATGGAGCC 5424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14984795369610
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