Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001701.1 Length=5106 Score E Sequences producing significant alignments: (Bits) Value seq135 316 7e-83 >seq135 Length=518716 Score = 316 bits (350), Expect = 7e-83 Identities = 479/671 (71%), Gaps = 9/671 (1%) Strand=Plus/Minus Query 1334 AGCTGCACTGGAAAATGCCCGTGCTGAAATGTTATTGACAAAGACTGCAACTGATTACCT 1393 ||| |||||||| || || || || |||||| | |||||||| | || | ||||| Sbjct 128007 AGCAGCACTGGAGAACGCGCGAGCCGAAATGCTCCTGACAAAGTCGGCCGAAGGCTACCT 127948 Query 1394 GATAGGAAAAGACCCTGTCCTGGATATAACTAAGAATAGGGTCTATCAAATTCTGAAAAT 1453 | |||| || || ||| ||| || || | ||| | ||| | |||| || | | | Sbjct 127947 GCTAGGCAAGCTTCCAGTCGGGGACATCACAAGGAACAAGGTGTTTCAACTTTTCCAGGT 127888 Query 1454 GAATAACTACAACCCTCAATACATAGGAAGTATCCT-GTGCGGCTGGGTGAAGAGAGAGT 1512 |||| ||| |||| | || | ||||| || | ||||| | | |||| Sbjct 127887 GAATCGGTACGACCCCGTCTTGGCAGCGAACATCCTAGTTCA-CTGGGCCCGGCGGGAGT 127829 Query 1513 TCAACAAAAGAAAC-GCCATATGGCTCTACGGACCTGCCACCACCGGGAAGACCAACATT 1571 ||||||| | ||| ||||| ||| ||||| ||||||| |||||| | ||||| | ||| Sbjct 127828 TCAACAAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATC 127769 Query 1572 GCAGAAGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAAC 1631 | || || ||||||| |||||| || || |||||||||| ||||||||||||| |||| Sbjct 127768 GTGGAGGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAAC 127709 Query 1632 TTTCCTTTTAATGATTGTGTTGATAAAATGCTGATTTGGTGGGAGGAGGGAAAAATGACT 1691 |||||||| ||||| || || ||||| ||| |||||||||||||||| ||||| ||||| Sbjct 127708 TTTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACC 127649 Query 1692 AATAAGGTTGTTGAATCTGCAAAAGCAATTTTGGGAGGGTCTGCTGT-CCGGGTAGACCA 1750 | ||| |||| || ||||| ||||| |||||||| ||||| || | | |||| || || Sbjct 127648 AGTAAAATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCGGGGTTGATCA 127589 Query 1751 GAAATGTAAAGGATCTGTTTGTATTGAACCTACTCCTGTAATTATTACTAGTAATACTGA 1810 ||||||||||| ||||| |||||||| || |||||| ||||||| ||||||| | Sbjct 127588 AAAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATA 127529 Query 1811 TATGTGTATGATTGTTGATGGCAACTCTACTACAATGGAACATAGAATACCATTAGAGGA 1870 || | ||| | |||||||| ||| ||||| ||||||||| ||| || ||||| Sbjct 127528 TACGGGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGA 127469 Query 1871 GCGTATGTTTCAAATTGTCCTATCACA-TAAATTGGAGCCTTCTTTTGGAAAAATTTCTA 1929 | ||||| | || | ||||| |||| || | | ||||| |||| || Sbjct 127468 AAGAATGTTCC--TTTTTAGGTTCACAGTAAAACTCAGGCATGATTTGGGGAAATAAGTA 127411 Query 1930 AAAAAGAAGTCAGAGAATTTTTCAAATGGGCCAATGACAAT-CTAGTTCCTGTTGTGTCT 1988 || || | |||||||||||| | |||| | ||| |||| ||| | || |||| | Sbjct 127410 AATGGGAGATAAGAGAATTTTTCCAGTGGGGCCATGGCAATGCTA-TACCGGTTGAACCG 127352 Query 1989 GAGTTCAAAGT 1999 | |||||| || Sbjct 127351 GTGTTCAAGGT 127341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16184504740855